RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 NFXL1Q6ZNB6 911 aa14.66□□□□□ -0.06
ARHGEF40-206ENST00000555232 SUCLG2Q96I99 432 aa14.66□□□□□ -0.06
ARHGEF40-206ENST00000555232 SF3A1Q15459 793 aaKnown RBP14.66□□□□□ -0.06
ARHGEF40-206ENST00000555232 UNC5CLQ8IV45 518 aa14.66□□□□□ -0.06
ARHGEF40-206ENST00000555232 ECHDC1Q9NTX5 307 aa14.66□□□□□ -0.06
ARHGEF40-206ENST00000555232 RNF20Q5VTR2 975 aa14.66□□□□□ -0.06
ARHGEF40-206ENST00000555232 TNPO1Q92973 898 aaKnown RBP14.66□□□□□ -0.06
ARHGEF40-206ENST00000555232 IGSF1Q8N6C5 1336 aa14.65□□□□□ -0.06
ARHGEF40-206ENST00000555232 SMIM5Q71RC9 77 aa14.65□□□□□ -0.06
ARHGEF40-206ENST00000555232 PPP1R1BQ9UD71 204 aaPredicted RBP14.65□□□□□ -0.06
ARHGEF40-206ENST00000555232 CPS1P31327 1500 aa14.65□□□□□ -0.06
ARHGEF40-206ENST00000555232 CHAF1AQ13111 956 aaPredicted RBP14.65□□□□□ -0.06
ARHGEF40-206ENST00000555232 NEXMIFQ5QGS0 1516 aa14.65□□□□□ -0.06
ARHGEF40-206ENST00000555232 ZNF853P0CG23 659 aa14.65□□□□□ -0.06
ARHGEF40-206ENST00000555232 RBM10P98175 930 aaKnown RBP14.65□□□□□ -0.06
ARHGEF40-206ENST00000555232 ERC1Q8IUD2 1116 aa14.65□□□□□ -0.06
ARHGEF40-206ENST00000555232 SIRT1Q96EB6 747 aa14.65□□□□□ -0.06
ARHGEF40-206ENST00000555232 ASAP1Q9ULH1 1129 aa14.65□□□□□ -0.06
ARHGEF40-206ENST00000555232 SOS1Q07889 1333 aaPredicted RBP14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 IFIT1P09914 478 aaKnown RBP14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 CCDC158Q5M9N0 1113 aa14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 QRICH2Q9H0J4 1663 aa14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 XRCC6P12956 609 aaKnown RBP eCLIP14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 TFCP2Q12800 502 aa14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 CCDC129Q6ZRS4 1044 aa14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 LINS1Q8NG48 757 aa14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 SLC52A2Q9HAB3 445 aa14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 FAM135BQ49AJ0 1406 aa14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 HCLS1P14317 486 aaPredicted RBP14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 ATP6V1AP38606 617 aa14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 FAM98CQ17RN3 349 aaKnown RBP14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 RALYLQ86SE5 291 aaKnown RBP14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 DDX21Q9NR30 783 aaKnown RBP eCLIP14.64□□□□□ -0.07
ARHGEF40-206ENST00000555232 CAMSAP1Q5T5Y3 1602 aa14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 CCT2P78371 535 aaKnown RBP14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 IFIT5Q13325 482 aaKnown RBP14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 BICD2Q8TD16 824 aa14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 DCAF5Q96JK2 942 aa14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 PHF23Q9BUL5 403 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 CWC25Q9NXE8 425 aaPredicted RBP14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 CYP46A1Q9Y6A2 500 aa14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 RAB11FIP3O75154 756 aa14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 DDB1Q16531 1140 aa14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 CD2BP2O95400 341 aaKnown RBP14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 PIK3C2BO00750 1634 aa14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 MROH2AA6NES4 1674 aa14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 PTPRUQ92729 1446 aa14.63□□□□□ -0.07
ARHGEF40-206ENST00000555232 PDRG1Q9NUG6 133 aa14.62□□□□□ -0.07
ARHGEF40-206ENST00000555232 NPHP4O75161 1426 aaPredicted RBP14.62□□□□□ -0.07
ARHGEF40-206ENST00000555232 ARHGEF40Q8TER5 1519 aa14.62□□□□□ -0.07
ARHGEF40-206ENST00000555232 PHKG2P15735 406 aa14.62□□□□□ -0.07
ARHGEF40-206ENST00000555232 TRDNQ13061 729 aa14.62□□□□□ -0.07
ARHGEF40-206ENST00000555232 BLOC1S2Q6QNY1 142 aa14.62□□□□□ -0.07
ARHGEF40-206ENST00000555232 ABCC4O15439 1325 aa14.62□□□□□ -0.07
ARHGEF40-206ENST00000555232 NUCB2P80303 420 aa14.62□□□□□ -0.07
ARHGEF40-206ENST00000555232 RTL1A6NKG5 1358 aa14.62□□□□□ -0.07
ARHGEF40-206ENST00000555232 CCDC144CPQ8IYA2 1237 aa14.61□□□□□ -0.07
ARHGEF40-206ENST00000555232 FAM227BQ96M60 508 aa14.61□□□□□ -0.07
ARHGEF40-206ENST00000555232 LMTK3Q96Q04 1460 aa14.61□□□□□ -0.07
ARHGEF40-206ENST00000555232 RBM27Q9P2N5 1060 aaKnown RBP14.61□□□□□ -0.07
ARHGEF40-206ENST00000555232 ERBB3P21860 1342 aa14.61□□□□□ -0.07
ARHGEF40-206ENST00000555232 DBNDD2Q9BQY9 259 aa14.61□□□□□ -0.07
ARHGEF40-206ENST00000555232 ESYT1Q9BSJ8 1104 aa14.61□□□□□ -0.07
ARHGEF40-206ENST00000555232 ADAMTS13Q76LX8 1427 aa14.61□□□□□ -0.07
ARHGEF40-206ENST00000555232 TFIP11Q9UBB9 837 aaKnown RBP14.6□□□□□ -0.07
ARHGEF40-206ENST00000555232 HTATSF1O43719 755 aaKnown RBP14.6□□□□□ -0.07
ARHGEF40-206ENST00000555232 BRINP3Q76B58 766 aa14.6□□□□□ -0.07
ARHGEF40-206ENST00000555232 ADGRB1O14514 1584 aa14.6□□□□□ -0.07
ARHGEF40-206ENST00000555232 CYP27B1O15528 508 aa14.6□□□□□ -0.07
ARHGEF40-206ENST00000555232 CLCN1P35523 988 aa14.6□□□□□ -0.07
ARHGEF40-206ENST00000555232 AATKQ6ZMQ8 1374 aa14.59□□□□□ -0.07
ARHGEF40-206ENST00000555232 ATP7BP35670 1465 aa14.59□□□□□ -0.07
ARHGEF40-206ENST00000555232 MSNP26038 577 aaKnown RBP14.59□□□□□ -0.07
ARHGEF40-206ENST00000555232 LARP1BQ659C4 914 aaKnown RBP14.59□□□□□ -0.07
ARHGEF40-206ENST00000555232 SYNE4Q8N205 404 aa14.59□□□□□ -0.07
ARHGEF40-206ENST00000555232 SLFNL1Q499Z3 407 aa14.59□□□□□ -0.07
ARHGEF40-206ENST00000555232 TLR7Q9NYK1 1049 aaKnown RBP14.59□□□□□ -0.07
ARHGEF40-206ENST00000555232 LRP2BPQ9P2M1 347 aa14.59□□□□□ -0.07
ARHGEF40-206ENST00000555232 TMX3Q96JJ7 454 aa14.59□□□□□ -0.07
ARHGEF40-206ENST00000555232 DNAJC5Q9H3Z4 198 aa14.59□□□□□ -0.07
ARHGEF40-206ENST00000555232 PALD1Q9ULE6 856 aa14.59□□□□□ -0.07
ARHGEF40-206ENST00000555232 CHMLP26374 656 aa14.58□□□□□ -0.08
ARHGEF40-206ENST00000555232 NMIQ13287 307 aaPredicted RBP14.58□□□□□ -0.08
ARHGEF40-206ENST00000555232 PKP1Q13835 747 aa14.58□□□□□ -0.08
ARHGEF40-206ENST00000555232 RAI14Q9P0K7 980 aa14.58□□□□□ -0.08
ARHGEF40-206ENST00000555232 MINDY4BA8MYZ0 360 aa14.58□□□□□ -0.08
ARHGEF40-206ENST00000555232 SNAP23O00161 211 aa14.58□□□□□ -0.08
ARHGEF40-206ENST00000555232 NUP133Q8WUM0 1156 aa14.57□□□□□ -0.08
ARHGEF40-206ENST00000555232 SEC62Q99442 399 aaKnown RBP14.57□□□□□ -0.08
ARHGEF40-206ENST00000555232 FAM13BQ9NYF5 915 aa14.57□□□□□ -0.08
ARHGEF40-206ENST00000555232 TAF5LO75529 589 aa14.57□□□□□ -0.08
ARHGEF40-206ENST00000555232 LMTK2Q8IWU2 1503 aa14.57□□□□□ -0.08
ARHGEF40-206ENST00000555232 MROH1Q8NDA8 1641 aa14.57□□□□□ -0.08
ARHGEF40-206ENST00000555232 BEND3Q5T5X7 828 aa14.57□□□□□ -0.08
ARHGEF40-206ENST00000555232 DZIP3Q86Y13 1208 aaKnown RBP14.57□□□□□ -0.08
ARHGEF40-206ENST00000555232 USP26Q9BXU7 913 aa14.57□□□□□ -0.08
ARHGEF40-206ENST00000555232 NIP7Q9Y221 180 aaKnown RBP eCLIP14.57□□□□□ -0.08
ARHGEF40-206ENST00000555232 ARHGEF10O15013 1369 aa14.56□□□□□ -0.08
ARHGEF40-206ENST00000555232 DHX16O60231 1041 aaKnown RBP14.56□□□□□ -0.08
ARHGEF40-206ENST00000555232 CAMK4Q16566 473 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms