RNA–Protein interactions for RNA: ENST00000498463.5

SNX13-212, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 687 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-212ENST00000498463 EIF1AYO14602 144 aaKnown RBP12.21□□□□□ -0.45
SNX13-212ENST00000498463 TEAD4Q15561 434 aa12.21□□□□□ -0.45
SNX13-212ENST00000498463 ZNF394Q53GI3 561 aa12.21□□□□□ -0.45
SNX13-212ENST00000498463 ZDHHC1Q8WTX9 485 aa12.21□□□□□ -0.45
SNX13-212ENST00000498463 KLK14Q9P0G3 267 aa12.21□□□□□ -0.45
SNX13-212ENST00000498463 TMA7Q9Y2S6 64 aaKnown RBP12.21□□□□□ -0.45
SNX13-212ENST00000498463 PCDHGB7Q9Y5F8 929 aa12.21□□□□□ -0.45
SNX13-212ENST00000498463 POTEMA6NI47 508 aa12.2□□□□□ -0.46
SNX13-212ENST00000498463 CCDC144BQ3MJ40 725 aa12.2□□□□□ -0.46
SNX13-212ENST00000498463 CNKSR1Q969H4 720 aa12.2□□□□□ -0.46
SNX13-212ENST00000498463 IFT43Q96FT9 208 aa12.2□□□□□ -0.46
SNX13-212ENST00000498463 HIRIP3Q9BW71 556 aaPredicted RBP12.2□□□□□ -0.46
SNX13-212ENST00000498463 ZNF232Q9UNY5 417 aa12.2□□□□□ -0.46
SNX13-212ENST00000498463 SPG7Q9UQ90 795 aa12.2□□□□□ -0.46
SNX13-212ENST00000498463 HRH3Q9Y5N1 445 aa12.2□□□□□ -0.46
SNX13-212ENST00000498463 ARID5AQ03989 594 aa12.19□□□□□ -0.46
SNX13-212ENST00000498463 ZNF654Q8IZM8 581 aa12.19□□□□□ -0.46
SNX13-212ENST00000498463 FAM163AQ96GL9 167 aaPredicted RBP12.19□□□□□ -0.46
SNX13-212ENST00000498463 ESYT1Q9BSJ8 1104 aa12.19□□□□□ -0.46
SNX13-212ENST00000498463 HCN4Q9Y3Q4 1203 aa12.19□□□□□ -0.46
SNX13-212ENST00000498463 ADH1CP00326 375 aa12.18□□□□□ -0.46
SNX13-212ENST00000498463 PCSK2P16519 638 aa12.18□□□□□ -0.46
SNX13-212ENST00000498463 NOS2P35228 1153 aa12.18□□□□□ -0.46
SNX13-212ENST00000498463 PTPN5P54829 565 aa12.18□□□□□ -0.46
SNX13-212ENST00000498463 RACK1P63244 317 aaKnown RBP12.18□□□□□ -0.46
SNX13-212ENST00000498463 ZNF295-AS1Q8N0V1 137 aa12.18□□□□□ -0.46
SNX13-212ENST00000498463 RNF223E7ERA6 249 aa12.17□□□□□ -0.46
SNX13-212ENST00000498463 OPLAHO14841 1288 aa12.17□□□□□ -0.46
SNX13-212ENST00000498463 EIF4BP23588 611 aaKnown RBP12.17□□□□□ -0.46
SNX13-212ENST00000498463 USP48Q86UV5 1035 aa12.17□□□□□ -0.46
SNX13-212ENST00000498463 ANKRD13AQ8IZ07 590 aa12.17□□□□□ -0.46
SNX13-212ENST00000498463 MPNDQ8N594 471 aa12.17□□□□□ -0.46
SNX13-212ENST00000498463 DNAJC25Q9H1X3 360 aa12.17□□□□□ -0.46
SNX13-212ENST00000498463 NR5A1Q13285 461 aa12.16□□□□□ -0.46
SNX13-212ENST00000498463 RC3H1Q5TC82 1133 aaKnown RBP12.16□□□□□ -0.46
SNX13-212ENST00000498463 GPR152Q8TDT2 470 aa12.16□□□□□ -0.46
SNX13-212ENST00000498463 L3MBTL2Q969R5 705 aa12.16□□□□□ -0.46
SNX13-212ENST00000498463 NUDT16Q96DE0 195 aaKnown RBP12.16□□□□□ -0.46
SNX13-212ENST00000498463 CABP1Q9NZU7 370 aa12.16□□□□□ -0.46
SNX13-212ENST00000498463 NR3C2P08235 984 aa12.15□□□□□ -0.46
SNX13-212ENST00000498463 PTPN12Q05209 780 aaKnown RBP12.15□□□□□ -0.46
SNX13-212ENST00000498463 HS2ST1Q7LGA3 356 aa12.15□□□□□ -0.46
SNX13-212ENST00000498463 TREML1Q86YW5 311 aa12.15□□□□□ -0.46
SNX13-212ENST00000498463 ANKLE1Q8NAG6 615 aa12.15□□□□□ -0.46
SNX13-212ENST00000498463 PMFBP1Q8TBY8 1022 aa12.15□□□□□ -0.46
SNX13-212ENST00000498463 PHACTR1Q9C0D0 580 aa12.15□□□□□ -0.46
SNX13-212ENST00000498463 PGPEP1Q9NXJ5 209 aa12.15□□□□□ -0.46
SNX13-212ENST00000498463 NEFLP07196 543 aa12.14□□□□□ -0.47
SNX13-212ENST00000498463 RBL2Q08999 1139 aa12.14□□□□□ -0.47
SNX13-212ENST00000498463 CLN3Q13286 438 aa12.14□□□□□ -0.47
SNX13-212ENST00000498463 C8orf34Q49A92 452 aa12.14□□□□□ -0.47
SNX13-212ENST00000498463 ZNF662Q6ZS27 426 aa12.14□□□□□ -0.47
SNX13-212ENST00000498463 GGNBP2Q9H3C7 697 aa12.14□□□□□ -0.47
SNX13-212ENST00000498463 SRA1Q9HD15 236 aaKnown RBP12.14□□□□□ -0.47
SNX13-212ENST00000498463 PARP3Q9Y6F1 533 aa12.14□□□□□ -0.47
SNX13-212ENST00000498463 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.13□□□□□ -0.47
SNX13-212ENST00000498463 PPP1R18Q6NYC8 613 aa12.13□□□□□ -0.47
SNX13-212ENST00000498463 FHDC1Q9C0D6 1143 aaPredicted RBP12.13□□□□□ -0.47
SNX13-212ENST00000498463 PIF1Q9H611 641 aa12.13□□□□□ -0.47
SNX13-212ENST00000498463 TLDC2A0PJX2 215 aa12.12□□□□□ -0.47
SNX13-212ENST00000498463 A6NHS1 94 aa12.12□□□□□ -0.47
SNX13-212ENST00000498463 CPNE3O75131 537 aaKnown RBP12.12□□□□□ -0.47
SNX13-212ENST00000498463 ADH1AP07327 375 aa12.12□□□□□ -0.47
SNX13-212ENST00000498463 RPIAP49247 311 aa12.12□□□□□ -0.47
SNX13-212ENST00000498463 GGT7Q9UJ14 662 aa12.12□□□□□ -0.47
SNX13-212ENST00000498463 MCF2L2Q86YR7 1114 aa12.11□□□□□ -0.47
SNX13-212ENST00000498463 TTC16Q8NEE8 873 aa12.11□□□□□ -0.47
SNX13-212ENST00000498463 C12orf49Q9H741 205 aa12.11□□□□□ -0.47
SNX13-212ENST00000498463 ZSWIM4Q9H7M6 989 aa12.11□□□□□ -0.47
SNX13-212ENST00000498463 SIAH2O43255 324 aa12.1□□□□□ -0.47
SNX13-212ENST00000498463 CENPCQ03188 943 aa12.1□□□□□ -0.47
SNX13-212ENST00000498463 KDF1Q8NAX2 398 aaPredicted RBP12.1□□□□□ -0.47
SNX13-212ENST00000498463 RPLP1P05386 114 aaKnown RBP12.09□□□□□ -0.47
SNX13-212ENST00000498463 FGRP09769 529 aa12.09□□□□□ -0.47
SNX13-212ENST00000498463 SOGA3Q5TF21 947 aa12.09□□□□□ -0.47
SNX13-212ENST00000498463 PI16Q6UXB8 463 aa12.09□□□□□ -0.47
SNX13-212ENST00000498463 VPS37DQ86XT2 251 aa12.09□□□□□ -0.47
SNX13-212ENST00000498463 BCS1LQ9Y276 419 aa12.09□□□□□ -0.47
SNX13-212ENST00000498463 TBX22Q9Y458 520 aa12.09□□□□□ -0.47
SNX13-212ENST00000498463 USP31Q70CQ4 1352 aa12.08□□□□□ -0.48
SNX13-212ENST00000498463 LCE2DQ5TA82 110 aaPredicted RBP12.08□□□□□ -0.48
SNX13-212ENST00000498463 C1orf53Q5VUE5 145 aa12.08□□□□□ -0.48
SNX13-212ENST00000498463 LHX8Q68G74 356 aa12.08□□□□□ -0.48
SNX13-212ENST00000498463 PPARGC1BQ86YN6 1023 aaKnown RBP12.08□□□□□ -0.48
SNX13-212ENST00000498463 OSBPL7Q9BZF2 842 aa12.08□□□□□ -0.48
SNX13-212ENST00000498463 FAM13BQ9NYF5 915 aa12.08□□□□□ -0.48
SNX13-212ENST00000498463 GIPC1O14908 333 aa12.07□□□□□ -0.48
SNX13-212ENST00000498463 GJA8P48165 433 aa12.07□□□□□ -0.48
SNX13-212ENST00000498463 MEI1Q5TIA1 1274 aa12.07□□□□□ -0.48
SNX13-212ENST00000498463 SDE2Q6IQ49 451 aa12.07□□□□□ -0.48
SNX13-212ENST00000498463 NIFKQ9BYG3 293 aaKnown RBP12.07□□□□□ -0.48
SNX13-212ENST00000498463 OSBPL2Q9H1P3 480 aa12.07□□□□□ -0.48
SNX13-212ENST00000498463 STK10O94804 968 aaKnown RBP12.06□□□□□ -0.48
SNX13-212ENST00000498463 CD2BP2O95400 341 aaKnown RBP12.06□□□□□ -0.48
SNX13-212ENST00000498463 IRS1P35568 1242 aa12.06□□□□□ -0.48
SNX13-212ENST00000498463 USPL1Q5W0Q7 1092 aa12.06□□□□□ -0.48
SNX13-212ENST00000498463 GGCXP38435 758 aa12.05□□□□□ -0.48
SNX13-212ENST00000498463 TAF1CQ15572 869 aaPredicted RBP12.05□□□□□ -0.48
SNX13-212ENST00000498463 EPS8L3Q8TE67 593 aaKnown RBP12.05□□□□□ -0.48
SNX13-212ENST00000498463 CCDC74AQ96AQ1 378 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms