RNA–Protein interactions for RNA: ENSMUST00000087253.10

Tro-201, Transcript of Tro protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Tro, Length 3,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tro-201ENSMUST00000087253 Foxp4Q9DBY0 795 aaKnown RBP12.56□□□□□ -0.4
Tro-201ENSMUST00000087253 Pnpla7A2AJ88 1352 aa12.56□□□□□ -0.4
Tro-201ENSMUST00000087253 Exoc6bA6H5Z3 810 aa12.56□□□□□ -0.4
Tro-201ENSMUST00000087253 Strn4P58404 760 aa12.56□□□□□ -0.4
Tro-201ENSMUST00000087253 Zfp91Q62511 572 aa12.56□□□□□ -0.4
Tro-201ENSMUST00000087253 Brf1Q8CFK2 676 aa12.56□□□□□ -0.4
Tro-201ENSMUST00000087253 Sf3a1Q8K4Z5 791 aaKnown RBP12.56□□□□□ -0.4
Tro-201ENSMUST00000087253 Shank3Q4ACU6 1730 aa12.55□□□□□ -0.4
Tro-201ENSMUST00000087253 Wdr78E9PYY5 807 aa12.55□□□□□ -0.4
Tro-201ENSMUST00000087253 Ddx19aQ61655 478 aaKnown RBP12.55□□□□□ -0.4
Tro-201ENSMUST00000087253 Fbxo2Q80UW2 297 aa12.55□□□□□ -0.4
Tro-201ENSMUST00000087253 Fam13bQ8K2H3 851 aa12.55□□□□□ -0.4
Tro-201ENSMUST00000087253 Bcl2l13P59017 434 aa12.55□□□□□ -0.4
Tro-201ENSMUST00000087253 Hvcn1Q3U2S8 269 aa12.55□□□□□ -0.4
Tro-201ENSMUST00000087253 EspnlQ3UYR4 1005 aa12.55□□□□□ -0.4
Tro-201ENSMUST00000087253 MlecQ6ZQI3 291 aaKnown RBP12.55□□□□□ -0.4
Tro-201ENSMUST00000087253 Rufy3Q9D394 469 aa12.55□□□□□ -0.4
Tro-201ENSMUST00000087253 Tceal9Q9DD24 104 aa12.55□□□□□ -0.4
Tro-201ENSMUST00000087253 Col15a1O35206 1367 aa12.54□□□□□ -0.4
Tro-201ENSMUST00000087253 Cfdp1O88271 295 aaKnown RBP12.54□□□□□ -0.4
Tro-201ENSMUST00000087253 Zap70P43404 618 aa12.54□□□□□ -0.4
Tro-201ENSMUST00000087253 Tlr7P58681 1050 aa12.54□□□□□ -0.4
Tro-201ENSMUST00000087253 Ppp1r37Q8BKR5 712 aa12.54□□□□□ -0.4
Tro-201ENSMUST00000087253 Ccdc178Q8CDV0 866 aa12.54□□□□□ -0.4
Tro-201ENSMUST00000087253 Cyp2d12Q8BVD2 504 aa12.54□□□□□ -0.4
Tro-201ENSMUST00000087253 Disp3A3KFU9 1347 aa12.54□□□□□ -0.4
Tro-201ENSMUST00000087253 Aox2Q5SGK3 1345 aa12.54□□□□□ -0.4
Tro-201ENSMUST00000087253 Ptgs1P22437 602 aa12.54□□□□□ -0.4
Tro-201ENSMUST00000087253 DpydQ8CHR6 1025 aa12.54□□□□□ -0.4
Tro-201ENSMUST00000087253 Mmel1Q9JLI3 765 aa12.54□□□□□ -0.4
Tro-201ENSMUST00000087253 Zfp804bA0A0G2JGH6 1343 aa12.54□□□□□ -0.4
Tro-201ENSMUST00000087253 Cfap73J3QPZ5 306 aa12.53□□□□□ -0.4
Tro-201ENSMUST00000087253 Ier5O89113 308 aa12.53□□□□□ -0.4
Tro-201ENSMUST00000087253 Zfp51Q3U4L8 781 aa12.53□□□□□ -0.4
Tro-201ENSMUST00000087253 Snx13Q6PHS6 957 aa12.53□□□□□ -0.4
Tro-201ENSMUST00000087253 Tceanc2Q8R2M0 207 aa12.53□□□□□ -0.4
Tro-201ENSMUST00000087253 Ms4a2P20490 235 aa12.53□□□□□ -0.4
Tro-201ENSMUST00000087253 Nom1Q3UFM5 854 aaKnown RBP12.53□□□□□ -0.4
Tro-201ENSMUST00000087253 Tmem132eQ6IEE6 982 aa12.53□□□□□ -0.4
Tro-201ENSMUST00000087253 Fam184aE9PW83 1143 aa12.52□□□□□ -0.4
Tro-201ENSMUST00000087253 Syt1P46096 421 aa12.52□□□□□ -0.4
Tro-201ENSMUST00000087253 Ube2hP62257 183 aa12.52□□□□□ -0.4
Tro-201ENSMUST00000087253 Wdr93Q402B2 695 aa12.52□□□□□ -0.4
Tro-201ENSMUST00000087253 Amotl1Q9D4H4 968 aa12.52□□□□□ -0.4
Tro-201ENSMUST00000087253 Ccdc7Q9D541 371 aa12.52□□□□□ -0.4
Tro-201ENSMUST00000087253 Fkbp4P30416 458 aa12.52□□□□□ -0.41
Tro-201ENSMUST00000087253 Tnnt2P50752 301 aa12.52□□□□□ -0.41
Tro-201ENSMUST00000087253 Top1mtQ8R4U6 593 aa12.52□□□□□ -0.41
Tro-201ENSMUST00000087253 Ccdc66Q6NS45 935 aa12.52□□□□□ -0.41
Tro-201ENSMUST00000087253 Mphosph10Q810V0 681 aaKnown RBP12.52□□□□□ -0.41
Tro-201ENSMUST00000087253 Zscan22Q8BGS5 496 aa12.52□□□□□ -0.41
Tro-201ENSMUST00000087253 Rps6ka5Q8C050 863 aa12.52□□□□□ -0.41
Tro-201ENSMUST00000087253 Mx2Q9WVP9 655 aa12.52□□□□□ -0.41
Tro-201ENSMUST00000087253 Rad50P70388 1312 aa12.52□□□□□ -0.41
Tro-201ENSMUST00000087253 Rnf123Q5XPI3 1314 aa12.52□□□□□ -0.41
Tro-201ENSMUST00000087253 Atf5O70191 283 aa12.51□□□□□ -0.41
Tro-201ENSMUST00000087253 Cbx1P83917 185 aaKnown RBP12.51□□□□□ -0.41
Tro-201ENSMUST00000087253 Tsr2Q8C8T8 191 aa12.51□□□□□ -0.41
Tro-201ENSMUST00000087253 Rbm42Q91V81 474 aaKnown RBP12.51□□□□□ -0.41
Tro-201ENSMUST00000087253 Farp2Q91VS8 1065 aa12.51□□□□□ -0.41
Tro-201ENSMUST00000087253 Cyp2d11P24457 504 aa12.51□□□□□ -0.41
Tro-201ENSMUST00000087253 Pa2g4P50580 394 aaKnown RBP12.51□□□□□ -0.41
Tro-201ENSMUST00000087253 CebpzP53569 1052 aaKnown RBP12.51□□□□□ -0.41
Tro-201ENSMUST00000087253 Med4Q9CQA5 270 aa12.51□□□□□ -0.41
Tro-201ENSMUST00000087253 HypkQ9CR41 129 aa12.51□□□□□ -0.41
Tro-201ENSMUST00000087253 Stk36Q69ZM6 1316 aa12.51□□□□□ -0.41
Tro-201ENSMUST00000087253 Cd22P35329 862 aa12.5□□□□□ -0.41
Tro-201ENSMUST00000087253 Cnnm3Q32NY4 713 aa12.5□□□□□ -0.41
Tro-201ENSMUST00000087253 Ncbp1Q3UYV9 790 aaKnown RBP12.5□□□□□ -0.41
Tro-201ENSMUST00000087253 Tti2Q8BGV4 512 aa12.5□□□□□ -0.41
Tro-201ENSMUST00000087253 Cdca7lQ922M5 438 aa12.5□□□□□ -0.41
Tro-201ENSMUST00000087253 Q9D9S1 216 aa12.5□□□□□ -0.41
Tro-201ENSMUST00000087253 Noc3lQ8VI84 807 aaKnown RBP12.5□□□□□ -0.41
Tro-201ENSMUST00000087253 Grpel1Q99LP6 217 aa12.5□□□□□ -0.41
Tro-201ENSMUST00000087253 Wdr24Q8CFJ9 790 aa12.5□□□□□ -0.41
Tro-201ENSMUST00000087253 Dhx30Q99PU8 1217 aaKnown RBP12.5□□□□□ -0.41
Tro-201ENSMUST00000087253 Lekr1B2RVN1 116 aa12.49□□□□□ -0.41
Tro-201ENSMUST00000087253 Fyb1O35601 819 aa12.49□□□□□ -0.41
Tro-201ENSMUST00000087253 Trim30aP15533 496 aa12.49□□□□□ -0.41
Tro-201ENSMUST00000087253 Kif3aP28741 701 aa12.49□□□□□ -0.41
Tro-201ENSMUST00000087253 Nup88Q8CEC0 753 aaKnown RBP12.49□□□□□ -0.41
Tro-201ENSMUST00000087253 EzrP26040 586 aaKnown RBP12.49□□□□□ -0.41
Tro-201ENSMUST00000087253 Gsdma3Q5Y4Y6 464 aa12.49□□□□□ -0.41
Tro-201ENSMUST00000087253 Edc3Q8K2D3 508 aaKnown RBP12.49□□□□□ -0.41
Tro-201ENSMUST00000087253 Dnajc10Q9DC23 793 aa12.49□□□□□ -0.41
Tro-201ENSMUST00000087253 Sipa1l3G3X9J0 1776 aa12.48□□□□□ -0.41
Tro-201ENSMUST00000087253 Tpd52l1O54818 204 aa12.48□□□□□ -0.41
Tro-201ENSMUST00000087253 Ifit2Q64112 472 aa12.48□□□□□ -0.41
Tro-201ENSMUST00000087253 Kiaa0754Q69ZZ9 979 aa12.48□□□□□ -0.41
Tro-201ENSMUST00000087253 Tbc1d31Q6NXY1 996 aa12.48□□□□□ -0.41
Tro-201ENSMUST00000087253 Nap1l3Q794H2 544 aa12.48□□□□□ -0.41
Tro-201ENSMUST00000087253 Brpf3B2KF05 1204 aaKnown RBP12.47□□□□□ -0.41
Tro-201ENSMUST00000087253 MecomP14404 1042 aa12.47□□□□□ -0.41
Tro-201ENSMUST00000087253 Usp25P57080 1055 aa12.47□□□□□ -0.41
Tro-201ENSMUST00000087253 Cct4P80315 539 aaKnown RBP12.47□□□□□ -0.41
Tro-201ENSMUST00000087253 SrrtQ99MR6 875 aaKnown RBP12.47□□□□□ -0.41
Tro-201ENSMUST00000087253 Fmnl2A2APV2 1086 aa12.47□□□□□ -0.41
Tro-201ENSMUST00000087253 Samd1D3YXK1 519 aa12.47□□□□□ -0.41
Tro-201ENSMUST00000087253 Pkp1P97350 728 aaKnown RBP12.47□□□□□ -0.41
Tro-201ENSMUST00000087253 Tgfb1i1Q62219 461 aa12.47□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms