RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 SMLR1H3BR10 107 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 CASC3O15234 703 aaKnown RBP11.31□□□□□ -0.6
CCNA1-201ENST00000255465 CD3EAPO15446 510 aaKnown RBP11.31□□□□□ -0.6
CCNA1-201ENST00000255465 LYRM1O43325 122 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 HPGDSO60760 199 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 ENDOD1O94919 500 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 S1PR4O95977 384 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 MT-CYBP00156 380 aaPredicted RBP11.31□□□□□ -0.6
CCNA1-201ENST00000255465 LRG1P02750 347 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 HOXC4P09017 264 aaPredicted RBP11.31□□□□□ -0.6
CCNA1-201ENST00000255465 COX5BP10606 129 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 PVALBP20472 110 aaPredicted RBP11.31□□□□□ -0.6
CCNA1-201ENST00000255465 HRH2P25021 359 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 ACADLP28330 430 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 ATP5OP48047 213 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 STARD6P59095 220 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 DYNLT1P63172 113 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 EMX2Q04743 252 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 AARDQ4LEZ3 155 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 ATP13A5Q4VNC0 1218 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 FAM74A3Q4VXF1 159 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 PYCR3Q53H96 274 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 OR2B11Q5JQS5 317 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 THEM4Q5T1C6 240 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 VASNQ6EMK4 673 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 PLBD1Q6P4A8 553 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 LARP4Q71RC2 724 aaKnown RBP eCLIP11.31□□□□□ -0.6
CCNA1-201ENST00000255465 CDKL3Q8IVW4 592 aaPredicted RBP11.31□□□□□ -0.6
CCNA1-201ENST00000255465 ADGRF3Q8IZF5 1079 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 MIER2Q8N344 545 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 CLDN22Q8N7P3 220 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 OR4F6Q8NGB9 312 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 OR52K1Q8NGK4 314 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 OR2T11Q8NH01 316 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 ZNF675Q8TD23 568 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 C2orf15Q8WU43 125 aaKnown RBP11.31□□□□□ -0.6
CCNA1-201ENST00000255465 CHTF18Q8WVB6 975 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 LRRC46Q96FV0 321 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 ZC3H10Q96K80 434 aaKnown RBP11.31□□□□□ -0.6
CCNA1-201ENST00000255465 PPP1R36Q96LQ0 422 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 ZPBPQ9BS86 351 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 C2orf88Q9BSF0 95 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 LRRC3Q9BY71 257 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 CRTAC1Q9NQ79 661 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 SLC39A10Q9ULF5 831 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 CNTN6Q9UQ52 1028 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 CDH10Q9Y6N8 788 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 VCANP13611 3396 aa11.31□□□□□ -0.6
CCNA1-201ENST00000255465 LOC100506127A0A0U1RQW1 187 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 MITFO75030 526 aaPredicted RBP11.3□□□□□ -0.6
CCNA1-201ENST00000255465 PTBP3O95758 552 aaKnown RBP11.3□□□□□ -0.6
CCNA1-201ENST00000255465 HEXAP06865 529 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 POU2F2P09086 479 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 HOXC5Q00444 222 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 SLC3A1Q07837 685 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 TWF1Q12792 350 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 CCINQ13939 588 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 DSG2Q14126 1118 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 TAF1AQ15573 450 aaPredicted RBP11.3□□□□□ -0.6
CCNA1-201ENST00000255465 FBXO48Q5FWF7 155 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 DHRS7BQ6IAN0 325 aaPredicted RBP11.3□□□□□ -0.6
CCNA1-201ENST00000255465 FAM198BQ6UWH4 519 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 GRASPQ7Z6J2 395 aaPredicted RBP11.3□□□□□ -0.6
CCNA1-201ENST00000255465 PAQR7Q86WK9 346 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 TMEM17Q86X19 198 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 TMEM151AQ8N4L1 468 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 C3orf30Q96M34 536 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 SFXN2Q96NB2 322 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 KCNS3Q9BQ31 491 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 YIPF4Q9BSR8 244 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 PHF7Q9BWX1 381 aaPredicted RBP11.3□□□□□ -0.6
CCNA1-201ENST00000255465 SEMA4CQ9C0C4 833 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 ARNT2Q9HBZ2 717 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 PSORS1C1Q9UIG5 152 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 ING1Q9UK53 422 aaPredicted RBP11.3□□□□□ -0.6
CCNA1-201ENST00000255465 DUSP12Q9UNI6 340 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 PADI2Q9Y2J8 665 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 YIPF1Q9Y548 306 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 MAGED1Q9Y5V3 778 aaPredicted RBP11.3□□□□□ -0.6
CCNA1-201ENST00000255465 OBSL1O75147 1896 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 A0A0C4DFX4 3053 aa11.3□□□□□ -0.6
CCNA1-201ENST00000255465 A8MVJ9 347 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 F8VP50 259 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CLDN4O14493 209 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 PRMT3O60678 531 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 VPS4BO75351 444 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 PRKRAO75569 313 aaKnown RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CST1P01037 141 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 APOC3P02656 99 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CSF2P04141 144 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 POLBP06746 335 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 KLK3P07288 261 aaPredicted RBP11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CYP4B1P13584 511 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 IGFBP5P24593 272 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 DCTP40126 519 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 CASP2P42575 452 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 RAG2P55895 527 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 KIAA1024LP59773 190 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 RAB5BP61020 215 aa11.29□□□□□ -0.6
CCNA1-201ENST00000255465 ERVK-25P63136 954 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms