RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 ARL15Q9NXU5 204 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 MARCH2Q9P0N8 246 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 FTSJ1Q9UET6 329 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 PIKFYVEQ9Y2I7 2098 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 TSPAN4O14817 238 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 SEC14L5O43304 696 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 ALPIP09923 528 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 ETFAP13804 333 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 PRPS1L1P21108 318 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 DGKAP23743 735 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 CRISP1P54107 249 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 CACNG1Q06432 222 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 SNTA1Q13424 505 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 PRAMEF19Q5SWL8 479 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 ALG1LQ6GMV1 187 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 ANKS3Q6ZW76 656 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 TMEM145Q8NBT3 493 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 NELL2Q99435 816 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 GPR63Q9BZJ6 419 aa18.11■□□□□ 0.49
PRPF39-201ENST00000355765 ZAR1LA6NP61 321 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 TRIM77I1YAP6 450 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 PSIP1O75475 530 aaKnown RBP18.1■□□□□ 0.49
PRPF39-201ENST00000355765 IGHA2P01877 340 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 ZNF865P0CJ78 1059 aaPredicted RBP18.1■□□□□ 0.49
PRPF39-201ENST00000355765 ITGB7P26010 798 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 HSPA14Q0VDF9 509 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 ZXDCQ2QGD7 858 aaPredicted RBP18.1■□□□□ 0.49
PRPF39-201ENST00000355765 FRMPD2BQ6IN97 320 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 CNIH2Q6PI25 160 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 TMEM65Q6PI78 240 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 ZNF852Q6ZMS4 543 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 GDPGP1Q6ZNW5 385 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 CPA6Q8N4T0 437 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 ZBTB2Q8N680 514 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 KLHL6Q8WZ60 621 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 TMEM80Q96HE8 168 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 ZNF224Q9NZL3 707 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 ISM1B1AKI9 464 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 CBX4O00257 560 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 APOL3O95236 402 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 CTSHP09668 335 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 PRKAR1AP10644 381 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 PER3P56645 1201 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 IL18Q14116 193 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 MPPE1Q53F39 396 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 MZT2BQ6NZ67 158 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 LINGO4Q6UY18 593 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 LAS2Q8IYD9 372 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 THEM5Q8N1Q8 247 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 C11orf65Q8NCR3 313 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 GALNT11Q8NCW6 608 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 DNAJA4Q8WW22 397 aaPredicted RBP18.1■□□□□ 0.49
PRPF39-201ENST00000355765 HHIPQ96QV1 700 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 MCOLN1Q9GZU1 580 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 CHST8Q9H2A9 424 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 ANKRA2Q9H9E1 313 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 ACER3Q9NUN7 267 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 ALPK3Q96L96 1907 aa18.1■□□□□ 0.49
PRPF39-201ENST00000355765 HPGDSO60760 199 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 PRAMEF1O95521 474 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 ZNF7P17097 686 aaPredicted RBP18.09■□□□□ 0.49
PRPF39-201ENST00000355765 ITPKAP23677 461 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 CCL23P55773 120 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 ABATP80404 500 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 LRRC32Q14392 662 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 SPDYE7PQ495Y7 208 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 CD300LGQ6UXG3 332 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 RNF165Q6ZSG1 346 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 ADGRG2Q8IZP9 1017 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 TTC9BQ8N6N2 239 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 SKA2Q8WVK7 121 aaPredicted RBP18.09■□□□□ 0.49
PRPF39-201ENST00000355765 MND1Q9BWT6 205 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 ST3GAL5Q9UNP4 418 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 PCDHB1Q9Y5F3 818 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 A8MX80 341 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 TLR4O00206 839 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 PRAMEF4O60810 478 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 GADD45GO95257 159 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 TACR2P21452 398 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 CLDN20P56880 219 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 SRSF11Q05519 484 aaKnown RBP18.09■□□□□ 0.49
PRPF39-201ENST00000355765 PCDH1Q08174 1060 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 ABRQ12979 859 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 ZNF284Q2VY69 593 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 PRAMEF9Q5VWM5 478 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 USP30Q70CQ3 517 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 KCTD20Q7Z5Y7 419 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 FAM46DQ8NEK8 389 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 ZNF680Q8NEM1 530 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 OR52P1PQ8NH57 321 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 HYLS1Q96M11 299 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 DUSP26Q9BV47 211 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 NMNAT1Q9HAN9 279 aaPredicted RBP18.09■□□□□ 0.49
PRPF39-201ENST00000355765 SLC25A19Q9HC21 320 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 PAK6Q9NQU5 681 aaPredicted RBP18.09■□□□□ 0.49
PRPF39-201ENST00000355765 SH3BP4Q9P0V3 963 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 PCDHB9Q9Y5E1 797 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 CCDC88CQ9P219 2028 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 GREB1Q4ZG55 1949 aa18.09■□□□□ 0.49
PRPF39-201ENST00000355765 TRIM3O75382 744 aaPredicted RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms