RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Fitm2P59266 262 aa15.25■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ppp2cbP62715 309 aa15.25■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ppp2caP63330 309 aa15.25■□□□□ 0.03
Trim39-203ENSMUST00000113706 Fam181bQ80VF6 417 aa15.25■□□□□ 0.03
Trim39-203ENSMUST00000113706 Parp12Q8BZ20 711 aaKnown RBP15.25■□□□□ 0.03
Trim39-203ENSMUST00000113706 Prmt5Q8CIG8 637 aa15.25■□□□□ 0.03
Trim39-203ENSMUST00000113706 Pfn3Q9DAD6 137 aa15.25■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ift46Q9DB07 301 aa15.25■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ehd1Q9WVK4 534 aaKnown RBP15.25■□□□□ 0.03
Trim39-203ENSMUST00000113706 Dpp6Q9Z218 804 aa15.25■□□□□ 0.03
Trim39-203ENSMUST00000113706 Plxnd1Q3UH93 1925 aa15.25■□□□□ 0.03
Trim39-203ENSMUST00000113706 H2-Q1O19441 368 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Reps1O54916 795 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Sap18O55128 153 aaKnown RBP15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 P18533 117 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Tmem38aQ3TMP8 298 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Sra1Q80VJ2 232 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Zc3hav1lQ8BFR1 296 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Gbp9Q8BTS3 619 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Gkn2Q9CQS6 184 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ribc2Q9D4Q1 309 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Smok1Q9QYZ4 484 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 SqorQ9R112 450 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Speer4cG3UXD1 256 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Gm10354K7N6A0 256 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ikzf3O08900 507 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Tacr2P30549 384 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Serpina7P61939 418 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Myo1dQ5SYD0 1006 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Rbm11Q80YT9 238 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 PstkQ8BP74 359 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Hs3st5Q8BSL4 346 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Rdh1Q8CGV4 317 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Spin4Q8K1L2 249 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 HscbQ8K3A0 234 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Mtg1Q8R2R6 326 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Adap2Q8R2V5 381 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Olfr854Q8VFF1 315 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Pcdh18Q8VHR0 1134 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Slc35a5Q921R7 437 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 CtsjQ9R014 334 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Xlr5bA2BI50 236 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Vmn2r50E9PW61 861 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Map2k3O09110 347 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Slc16a8O35308 492 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Nrp2O35375 931 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Psmb5O55234 264 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 FhitO89106 150 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Tcea3P23881 347 aaKnown RBP15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Tia1P52912 386 aaKnown RBP15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Il12rb2P97378 874 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Grin2cQ01098 1239 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Trim40Q3UWA4 246 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Mrm3Q5ND52 418 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 AptxQ7TQC5 342 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Efr3aQ8BG67 819 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Piwil2Q8CDG1 971 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Scamp1Q8K021 338 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ppp1r8Q8R3G1 351 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Dsn1Q9CYC5 348 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Clca3a2Q9EQR4 902 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Pkmyt1Q9ESG9 490 aa15.24■□□□□ 0.03
Trim39-203ENSMUST00000113706 Cfap77A0A087WRI3 283 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Saxo1B1AXP3 476 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Tgfb3P17125 410 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Tex10Q3URQ0 928 aaKnown RBP15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Slc25a23Q6GQS1 467 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Mfsd13aQ6PDE8 519 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 GalpQ810H5 117 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Fjx1Q8BQB4 450 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 B3gnt7Q8K0J2 397 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Slco1a5Q91YY5 670 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Mcm8Q9CWV1 833 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Q9D3J9 298 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Vmn2r90E9PXJ8 863 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 NagluO88325 739 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ugt2b17P17717 530 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Uap1l1Q3TW96 507 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Fam129aQ3UW53 926 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Nqo1Q64669 274 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Atp6v1g3Q8BMC1 118 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Nudt13Q8JZU0 352 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Agpat4Q8K4X7 378 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ugt2b38Q91WH2 530 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Klk6Q91Y82 253 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ttyh1Q9D3A9 450 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Pnp2Q9D8C9 305 aa15.23■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ndor1A2AI05 598 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Zfp352A2AML7 551 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Phf11A6H5X4 337 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Vsig10lD3YZF7 868 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Ap1arE9PYF7 298 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Vmn1r31L7N2F1 303 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Tuba1cP68373 449 aaKnown RBP15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Syndig1lQ3USQ7 237 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Hist2h2acQ64523 129 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Hist2h2aa1Q6GSS7 130 aaKnown RBP15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Q6P1I3 445 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Gstm7Q80W21 218 aa15.22■□□□□ 0.03
Trim39-203ENSMUST00000113706 Bag5Q8CI32 447 aa15.22■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms