Protein–RNA interactions for Protein: A6H5X4

Phf11, PHD finger protein 11, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11A6H5X4 Gm25239-201ENSMUST00000174915 86 ntBASIC36.63■■■■□ 3.45
Phf11A6H5X4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.75■■■□□ 2.99
Phf11A6H5X4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.32■■■□□ 2.92
Phf11A6H5X4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Phf11A6H5X4 Gm15042-201ENSMUST00000120212 883 ntBASIC32.2■■■□□ 2.75
Phf11A6H5X4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Phf11A6H5X4 Gm24109-201ENSMUST00000175489 103 ntBASIC31.63■■■□□ 2.65
Phf11A6H5X4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
Phf11A6H5X4 Gm15045-201ENSMUST00000117359 883 ntBASIC31.52■■■□□ 2.64
Phf11A6H5X4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Phf11A6H5X4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Phf11A6H5X4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Phf11A6H5X4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
Phf11A6H5X4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Phf11A6H5X4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Phf11A6H5X4 Gm23366-201ENSMUST00000175022 89 ntBASIC30.59■■■□□ 2.49
Phf11A6H5X4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Phf11A6H5X4 Psd-208ENSMUST00000224556 2034 ntBASIC30.37■■■□□ 2.45
Phf11A6H5X4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.33■■■□□ 2.45
Phf11A6H5X4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Phf11A6H5X4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Phf11A6H5X4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Phf11A6H5X4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Phf11A6H5X4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Phf11A6H5X4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
Phf11A6H5X4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.36
Phf11A6H5X4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
Phf11A6H5X4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Phf11A6H5X4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.6■■■□□ 2.33
Phf11A6H5X4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.59■■■□□ 2.33
Phf11A6H5X4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.57■■■□□ 2.32
Phf11A6H5X4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.3■■■□□ 2.28
Phf11A6H5X4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Phf11A6H5X4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Phf11A6H5X4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.15■■■□□ 2.26
Phf11A6H5X4 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC29.05■■■□□ 2.24
Phf11A6H5X4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Phf11A6H5X4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.99■■■□□ 2.23
Phf11A6H5X4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Phf11A6H5X4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.22
Phf11A6H5X4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Phf11A6H5X4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.91■■■□□ 2.22
Phf11A6H5X4 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Phf11A6H5X4 Gm25238-201ENSMUST00000174914 89 ntBASIC28.85■■■□□ 2.21
Phf11A6H5X4 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC28.78■■■□□ 2.2
Phf11A6H5X4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
Phf11A6H5X4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
Phf11A6H5X4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
Phf11A6H5X4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.59■■■□□ 2.17
Phf11A6H5X4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Phf11A6H5X4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Phf11A6H5X4 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Phf11A6H5X4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Phf11A6H5X4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Phf11A6H5X4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.42■■■□□ 2.14
Phf11A6H5X4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Phf11A6H5X4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Phf11A6H5X4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Phf11A6H5X4 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.27■■■□□ 2.12
Phf11A6H5X4 Gm27325-201ENSMUST00000175467 74 ntBASIC28.26■■■□□ 2.11
Phf11A6H5X4 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC28.25■■■□□ 2.11
Phf11A6H5X4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Phf11A6H5X4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Phf11A6H5X4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Phf11A6H5X4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.04■■■□□ 2.08
Phf11A6H5X4 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.03■■■□□ 2.08
Phf11A6H5X4 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC28■■■□□ 2.07
Phf11A6H5X4 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC27.95■■■□□ 2.06
Phf11A6H5X4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Phf11A6H5X4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC27.94■■■□□ 2.06
Phf11A6H5X4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.92■■■□□ 2.06
Phf11A6H5X4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Phf11A6H5X4 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC27.91■■■□□ 2.06
Phf11A6H5X4 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.88■■■□□ 2.05
Phf11A6H5X4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Phf11A6H5X4 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Phf11A6H5X4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Phf11A6H5X4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27.8■■■□□ 2.04
Phf11A6H5X4 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC27.79■■■□□ 2.04
Phf11A6H5X4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
Phf11A6H5X4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Phf11A6H5X4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC27.73■■■□□ 2.03
Phf11A6H5X4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.68■■■□□ 2.02
Phf11A6H5X4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Phf11A6H5X4 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Phf11A6H5X4 Rab21-202ENSMUST00000218831 843 ntBASIC27.6■■■□□ 2.01
Phf11A6H5X4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Phf11A6H5X4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.55■■■□□ 2
Phf11A6H5X4 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.54■■■□□ 2
Phf11A6H5X4 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Phf11A6H5X4 Gm25262-201ENSMUST00000174934 133 ntBASIC27.51■■□□□ 1.99
Phf11A6H5X4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Phf11A6H5X4 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.49■■□□□ 1.99
Phf11A6H5X4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Phf11A6H5X4 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
Phf11A6H5X4 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
Phf11A6H5X4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Phf11A6H5X4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Phf11A6H5X4 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.24■■□□□ 1.95
Phf11A6H5X4 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 76,532 protein–RNA pairs in 169.1 ms