Protein–RNA interactions for Protein: P23881

Tcea3, Transcription elongation factor A protein 3, mousemouse

Known RBP Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcea3P23881 Gm25239-201ENSMUST00000174915 86 ntBASIC38.18■■■■□ 3.7
Tcea3P23881 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
Tcea3P23881 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Tcea3P23881 Gm15042-201ENSMUST00000120212 883 ntBASIC33.26■■■□□ 2.91
Tcea3P23881 Gm24109-201ENSMUST00000175489 103 ntBASIC33.12■■■□□ 2.89
Tcea3P23881 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Tcea3P23881 Gm15045-201ENSMUST00000117359 883 ntBASIC32.45■■■□□ 2.79
Tcea3P23881 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
Tcea3P23881 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.27■■■□□ 2.76
Tcea3P23881 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
Tcea3P23881 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Tcea3P23881 Gm23366-201ENSMUST00000175022 89 ntBASIC31.95■■■□□ 2.71
Tcea3P23881 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Tcea3P23881 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
Tcea3P23881 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Tcea3P23881 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Tcea3P23881 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.93■■■□□ 2.54
Tcea3P23881 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Tcea3P23881 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.68■■■□□ 2.5
Tcea3P23881 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.66■■■□□ 2.5
Tcea3P23881 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC30.66■■■□□ 2.5
Tcea3P23881 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Tcea3P23881 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.48■■■□□ 2.47
Tcea3P23881 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Tcea3P23881 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Tcea3P23881 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Tcea3P23881 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.28■■■□□ 2.44
Tcea3P23881 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Tcea3P23881 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Tcea3P23881 Psd-208ENSMUST00000224556 2034 ntBASIC30.18■■■□□ 2.42
Tcea3P23881 Gm25238-201ENSMUST00000174914 89 ntBASIC30.15■■■□□ 2.42
Tcea3P23881 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Tcea3P23881 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
Tcea3P23881 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.13■■■□□ 2.41
Tcea3P23881 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
Tcea3P23881 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC29.98■■■□□ 2.39
Tcea3P23881 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
Tcea3P23881 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.71■■■□□ 2.35
Tcea3P23881 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC29.5■■■□□ 2.31
Tcea3P23881 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Tcea3P23881 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Tcea3P23881 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.4■■■□□ 2.3
Tcea3P23881 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.39■■■□□ 2.3
Tcea3P23881 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.38■■■□□ 2.29
Tcea3P23881 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.35■■■□□ 2.29
Tcea3P23881 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Tcea3P23881 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC29.24■■■□□ 2.27
Tcea3P23881 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Tcea3P23881 Gm27325-201ENSMUST00000175467 74 ntBASIC29.12■■■□□ 2.25
Tcea3P23881 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.08■■■□□ 2.25
Tcea3P23881 Gm25262-201ENSMUST00000174934 133 ntBASIC29.06■■■□□ 2.24
Tcea3P23881 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Tcea3P23881 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC28.98■■■□□ 2.23
Tcea3P23881 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Tcea3P23881 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
Tcea3P23881 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Tcea3P23881 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Tcea3P23881 Rab21-202ENSMUST00000218831 843 ntBASIC28.73■■■□□ 2.19
Tcea3P23881 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.69■■■□□ 2.18
Tcea3P23881 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Tcea3P23881 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.68■■■□□ 2.18
Tcea3P23881 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.66■■■□□ 2.18
Tcea3P23881 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Tcea3P23881 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.57■■■□□ 2.16
Tcea3P23881 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Tcea3P23881 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Tcea3P23881 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.5■■■□□ 2.15
Tcea3P23881 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Tcea3P23881 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Tcea3P23881 Gm26115-201ENSMUST00000175605 87 ntBASIC28.39■■■□□ 2.14
Tcea3P23881 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.37■■■□□ 2.13
Tcea3P23881 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Tcea3P23881 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.3■■■□□ 2.12
Tcea3P23881 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
Tcea3P23881 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
Tcea3P23881 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Tcea3P23881 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Tcea3P23881 Gm10524-201ENSMUST00000181931 1893 ntBASIC28.25■■■□□ 2.11
Tcea3P23881 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Tcea3P23881 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tcea3P23881 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Tcea3P23881 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.21■■■□□ 2.11
Tcea3P23881 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.2■■■□□ 2.1
Tcea3P23881 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
Tcea3P23881 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Tcea3P23881 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Tcea3P23881 Gm8109-201ENSMUST00000194076 746 ntBASIC28.14■■■□□ 2.1
Tcea3P23881 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Tcea3P23881 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Tcea3P23881 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.1■■■□□ 2.09
Tcea3P23881 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Tcea3P23881 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Tcea3P23881 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC28.06■■■□□ 2.08
Tcea3P23881 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Tcea3P23881 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.93■■■□□ 2.06
Tcea3P23881 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.93■■■□□ 2.06
Tcea3P23881 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Tcea3P23881 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.89■■■□□ 2.06
Tcea3P23881 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Tcea3P23881 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.82■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms