RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Map2k7Q8CE90 535 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 HopxQ8R1H0 73 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Vmn1r214Q8R279 367 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Cdt1Q8R4E9 557 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Abhd4Q8VD66 342 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Acsl6Q91WC3 697 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Eif3mQ99JX4 374 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Desi1Q9CQT7 168 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Prl7c1Q9CRB5 251 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Mau2Q9D2X5 619 aaKnown RBP11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Vmn1r29Q9EQ41 303 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Ap3m1Q9JKC8 418 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Skp2Q9Z0Z3 424 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Esp18A8R0V1 91 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Gm5861F6VCN9 180 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 4933402N22RikF7D1B3 190 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Olfr319L7MTY4 306 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Kif1cO35071 1100 aaKnown RBP11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Tssk2O54863 358 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 P01878 344 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Wnt6P22727 364 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Slc26a1P58735 704 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Mapk1P63085 358 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Irf7P70434 457 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Zfp935Q14DI0 353 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Kcna7Q17ST2 489 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Zbtb9Q8CDC7 459 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Fam129bQ8R1F1 749 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Tmem269Q9D4Y8 254 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 FancgQ9EQR6 623 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 GabrqQ9JLF1 638 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Cst9Q9Z0H6 137 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Cldn7Q9Z261 211 aa11.16□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Chd3B1AR17 2055 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Ttll2A4Q9E4 540 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Ddx43D3Z6P9 646 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Gm17019K7N6W5 255 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Tulp3O88413 460 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 HbaP01942 142 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Chrm4P32211 479 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 IduaP48441 634 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Eef1a2P62631 463 aaKnown RBP11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 H2-M3Q31093 336 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Atg16l2Q6KAU8 623 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Tusc3Q8BTV1 347 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Larp4Q8BWW4 719 aaKnown RBP11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Zhx3Q8C0Q2 951 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 C1rbQ8CFG9 706 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Clec4a3Q8JZX6 237 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Rnf208Q8K0W3 265 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Kctd5Q8VC57 234 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Q91V76 315 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Smurf1Q9CUN6 731 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Psg23Q9D2U0 471 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Psg21Q9DAV5 471 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Ehd3Q9QXY6 535 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Spo11Q9WTK8 396 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Smarcb1Q9Z0H3 385 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Cldn9Q9Z0S7 217 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Loxl3Q9Z175 754 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Ect2lA0A140LIP2 953 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Btnl6A2CG22 539 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Tnfrsf25B1AWN9 411 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Prdm14E9Q3T6 561 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Cacng1O70578 223 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Csf2rbP26955 896 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 A1bgQ19LI2 512 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Q3UST5 385 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Cpxcr1Q3V0P1 322 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 ClpbQ60649 677 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Klra2Q60660 288 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Sqstm1Q64337 442 aaKnown RBP11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Serpina3aQ6P4P1 422 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Dmtf1Q8CE22 761 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Cpne5Q8JZW4 593 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Sirt4Q8R216 333 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Gabarapl1Q8R3R8 117 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Hspa12bQ9CZJ2 685 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Pbdc1Q9D0B6 198 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Nek6Q9ES70 313 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Inpp5eQ9JII1 647 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Nectin3Q9JLB9 549 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Spry1Q9QXV9 313 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 AicdaQ9WVE0 198 aa11.15□□□□□ -0.62
Col9a1-202ENSMUST00000088349 Gm14147A2AQX6 640 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 PpigA2AR02 752 aaKnown RBP11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Zcchc7B1AX39 541 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 MlxO08609 298 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 HgdO09173 445 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 P01644 108 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 P01645 108 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 P01646 108 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 P01647 108 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 EnpepP16406 945 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 HmbsP22907 361 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Pax3P24610 479 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Man2a1P27046 1150 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Apoa1Q00623 264 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Znf800Q0VEE6 662 aa11.15□□□□□ -0.63
Col9a1-202ENSMUST00000088349 Ccdc185Q3V118 621 aa11.15□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms