Protein–RNA interactions for Protein: Q8R1H0

Hopx, Homeodomain-only protein, mousemouse

Predictions only

Length 73 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HopxQ8R1H0 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
HopxQ8R1H0 Gm25239-201ENSMUST00000174915 86 ntBASIC31.47■■■□□ 2.63
HopxQ8R1H0 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.06■■■□□ 2.56
HopxQ8R1H0 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
HopxQ8R1H0 Psd-208ENSMUST00000224556 2034 ntBASIC30.17■■■□□ 2.42
HopxQ8R1H0 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
HopxQ8R1H0 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
HopxQ8R1H0 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
HopxQ8R1H0 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
HopxQ8R1H0 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
HopxQ8R1H0 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
HopxQ8R1H0 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
HopxQ8R1H0 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
HopxQ8R1H0 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
HopxQ8R1H0 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.51■■■□□ 2.15
HopxQ8R1H0 Gm15042-201ENSMUST00000120212 883 ntBASIC28.44■■■□□ 2.14
HopxQ8R1H0 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
HopxQ8R1H0 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
HopxQ8R1H0 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
HopxQ8R1H0 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
HopxQ8R1H0 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
HopxQ8R1H0 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.08
HopxQ8R1H0 Gm15045-201ENSMUST00000117359 883 ntBASIC27.98■■■□□ 2.07
HopxQ8R1H0 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
HopxQ8R1H0 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
HopxQ8R1H0 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
HopxQ8R1H0 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
HopxQ8R1H0 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.68■■■□□ 2.02
HopxQ8R1H0 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.62■■■□□ 2.01
HopxQ8R1H0 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
HopxQ8R1H0 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.55■■■□□ 2
HopxQ8R1H0 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.53■■■□□ 2
HopxQ8R1H0 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
HopxQ8R1H0 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
HopxQ8R1H0 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.38■■□□□ 1.97
HopxQ8R1H0 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.27■■□□□ 1.96
HopxQ8R1H0 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
HopxQ8R1H0 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
HopxQ8R1H0 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HopxQ8R1H0 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
HopxQ8R1H0 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.07■■□□□ 1.92
HopxQ8R1H0 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.06■■□□□ 1.92
HopxQ8R1H0 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
HopxQ8R1H0 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
HopxQ8R1H0 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.96■■□□□ 1.91
HopxQ8R1H0 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
HopxQ8R1H0 Gm24109-201ENSMUST00000175489 103 ntBASIC26.83■■□□□ 1.89
HopxQ8R1H0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
HopxQ8R1H0 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.88
HopxQ8R1H0 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
HopxQ8R1H0 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
HopxQ8R1H0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
HopxQ8R1H0 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
HopxQ8R1H0 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
HopxQ8R1H0 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
HopxQ8R1H0 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
HopxQ8R1H0 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
HopxQ8R1H0 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HopxQ8R1H0 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
HopxQ8R1H0 Gm23366-201ENSMUST00000175022 89 ntBASIC26.43■■□□□ 1.82
HopxQ8R1H0 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.42■■□□□ 1.82
HopxQ8R1H0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
HopxQ8R1H0 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
HopxQ8R1H0 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
HopxQ8R1H0 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
HopxQ8R1H0 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
HopxQ8R1H0 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HopxQ8R1H0 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HopxQ8R1H0 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
HopxQ8R1H0 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
HopxQ8R1H0 AC153911.1-202ENSMUST00000218534 1034 ntBASIC26.15■■□□□ 1.78
HopxQ8R1H0 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC26.15■■□□□ 1.78
HopxQ8R1H0 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
HopxQ8R1H0 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
HopxQ8R1H0 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
HopxQ8R1H0 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HopxQ8R1H0 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
HopxQ8R1H0 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
HopxQ8R1H0 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
HopxQ8R1H0 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
HopxQ8R1H0 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
HopxQ8R1H0 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
HopxQ8R1H0 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.82■■□□□ 1.72
HopxQ8R1H0 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
HopxQ8R1H0 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
HopxQ8R1H0 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
HopxQ8R1H0 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
HopxQ8R1H0 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
HopxQ8R1H0 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
HopxQ8R1H0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
HopxQ8R1H0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC25.6■■□□□ 1.69
HopxQ8R1H0 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
HopxQ8R1H0 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
HopxQ8R1H0 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
HopxQ8R1H0 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
HopxQ8R1H0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
HopxQ8R1H0 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
HopxQ8R1H0 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
HopxQ8R1H0 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC25.43■■□□□ 1.66
HopxQ8R1H0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms