Protein–RNA interactions for Protein: Q64337

Sqstm1, Sequestosome-1, mousemouse

Known RBP Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sqstm1Q64337 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
Sqstm1Q64337 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
Sqstm1Q64337 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Sqstm1Q64337 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
Sqstm1Q64337 Psd-208ENSMUST00000224556 2034 ntBASIC29.13■■■□□ 2.25
Sqstm1Q64337 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Sqstm1Q64337 Gm25239-201ENSMUST00000174915 86 ntBASIC28.93■■■□□ 2.22
Sqstm1Q64337 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Sqstm1Q64337 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Sqstm1Q64337 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Sqstm1Q64337 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Sqstm1Q64337 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Sqstm1Q64337 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC27.54■■■□□ 2
Sqstm1Q64337 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Sqstm1Q64337 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Sqstm1Q64337 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Sqstm1Q64337 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
Sqstm1Q64337 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
Sqstm1Q64337 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC26.9■■□□□ 1.9
Sqstm1Q64337 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Sqstm1Q64337 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Sqstm1Q64337 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Sqstm1Q64337 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Sqstm1Q64337 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Sqstm1Q64337 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Sqstm1Q64337 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sqstm1Q64337 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.4■■□□□ 1.82
Sqstm1Q64337 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC26.4■■□□□ 1.82
Sqstm1Q64337 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sqstm1Q64337 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Sqstm1Q64337 Gm15042-201ENSMUST00000120212 883 ntBASIC26.28■■□□□ 1.8
Sqstm1Q64337 Gm42596-201ENSMUST00000196305 1958 ntBASIC26.27■■□□□ 1.8
Sqstm1Q64337 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Sqstm1Q64337 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sqstm1Q64337 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sqstm1Q64337 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sqstm1Q64337 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Sqstm1Q64337 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Sqstm1Q64337 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Sqstm1Q64337 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.94■■□□□ 1.74
Sqstm1Q64337 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC25.94■■□□□ 1.74
Sqstm1Q64337 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC25.93■■□□□ 1.74
Sqstm1Q64337 Gm15045-201ENSMUST00000117359 883 ntBASIC25.92■■□□□ 1.74
Sqstm1Q64337 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Sqstm1Q64337 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Sqstm1Q64337 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Sqstm1Q64337 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Sqstm1Q64337 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Sqstm1Q64337 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Sqstm1Q64337 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
Sqstm1Q64337 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
Sqstm1Q64337 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Sqstm1Q64337 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC25.45■■□□□ 1.66
Sqstm1Q64337 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Sqstm1Q64337 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Sqstm1Q64337 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sqstm1Q64337 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Sqstm1Q64337 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Sqstm1Q64337 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sqstm1Q64337 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Sqstm1Q64337 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC25.23■■□□□ 1.63
Sqstm1Q64337 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Sqstm1Q64337 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC25.2■■□□□ 1.62
Sqstm1Q64337 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Sqstm1Q64337 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Sqstm1Q64337 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.05■■□□□ 1.6
Sqstm1Q64337 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sqstm1Q64337 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sqstm1Q64337 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Sqstm1Q64337 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sqstm1Q64337 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
Sqstm1Q64337 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC24.97■■□□□ 1.59
Sqstm1Q64337 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.58
Sqstm1Q64337 Gm24109-201ENSMUST00000175489 103 ntBASIC24.86■■□□□ 1.57
Sqstm1Q64337 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
Sqstm1Q64337 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC24.83■■□□□ 1.56
Sqstm1Q64337 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC24.82■■□□□ 1.56
Sqstm1Q64337 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC24.82■■□□□ 1.56
Sqstm1Q64337 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Sqstm1Q64337 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
Sqstm1Q64337 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Sqstm1Q64337 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
Sqstm1Q64337 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
Sqstm1Q64337 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC24.69■■□□□ 1.54
Sqstm1Q64337 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.53
Sqstm1Q64337 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sqstm1Q64337 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Sqstm1Q64337 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Sqstm1Q64337 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Sqstm1Q64337 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Sqstm1Q64337 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
Sqstm1Q64337 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Sqstm1Q64337 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
Sqstm1Q64337 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Sqstm1Q64337 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC24.39■■□□□ 1.49
Sqstm1Q64337 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Sqstm1Q64337 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC24.38■■□□□ 1.49
Sqstm1Q64337 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Sqstm1Q64337 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Sqstm1Q64337 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms