Protein–RNA interactions for Protein: Q3V0P1

Cpxcr1, CPX chromosomal region candidate gene 1 protein homolog, mousemouse

Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpxcr1Q3V0P1 Gm25239-201ENSMUST00000174915 86 ntBASIC34.42■■■■□ 3.1
Cpxcr1Q3V0P1 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Cpxcr1Q3V0P1 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Cpxcr1Q3V0P1 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Cpxcr1Q3V0P1 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC31.46■■■□□ 2.63
Cpxcr1Q3V0P1 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Cpxcr1Q3V0P1 Gm15042-201ENSMUST00000120212 883 ntBASIC30.49■■■□□ 2.47
Cpxcr1Q3V0P1 Psd-208ENSMUST00000224556 2034 ntBASIC30.35■■■□□ 2.45
Cpxcr1Q3V0P1 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Cpxcr1Q3V0P1 Gm15045-201ENSMUST00000117359 883 ntBASIC29.87■■■□□ 2.37
Cpxcr1Q3V0P1 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC29.74■■■□□ 2.35
Cpxcr1Q3V0P1 Gm24109-201ENSMUST00000175489 103 ntBASIC29.63■■■□□ 2.33
Cpxcr1Q3V0P1 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Cpxcr1Q3V0P1 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.52■■■□□ 2.32
Cpxcr1Q3V0P1 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Cpxcr1Q3V0P1 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.32■■■□□ 2.28
Cpxcr1Q3V0P1 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Cpxcr1Q3V0P1 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Cpxcr1Q3V0P1 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC29.05■■■□□ 2.24
Cpxcr1Q3V0P1 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
Cpxcr1Q3V0P1 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Cpxcr1Q3V0P1 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC29.01■■■□□ 2.23
Cpxcr1Q3V0P1 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cpxcr1Q3V0P1 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Cpxcr1Q3V0P1 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Cpxcr1Q3V0P1 Gm23366-201ENSMUST00000175022 89 ntBASIC28.8■■■□□ 2.2
Cpxcr1Q3V0P1 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
Cpxcr1Q3V0P1 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Cpxcr1Q3V0P1 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.68■■■□□ 2.18
Cpxcr1Q3V0P1 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Cpxcr1Q3V0P1 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Cpxcr1Q3V0P1 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.52■■■□□ 2.16
Cpxcr1Q3V0P1 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Cpxcr1Q3V0P1 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.42■■■□□ 2.14
Cpxcr1Q3V0P1 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Cpxcr1Q3V0P1 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
Cpxcr1Q3V0P1 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Cpxcr1Q3V0P1 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cpxcr1Q3V0P1 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cpxcr1Q3V0P1 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
Cpxcr1Q3V0P1 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC28.04■■■□□ 2.08
Cpxcr1Q3V0P1 AC153911.1-202ENSMUST00000218534 1034 ntBASIC28■■■□□ 2.07
Cpxcr1Q3V0P1 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.9■■■□□ 2.06
Cpxcr1Q3V0P1 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.86■■■□□ 2.05
Cpxcr1Q3V0P1 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
Cpxcr1Q3V0P1 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.76■■■□□ 2.03
Cpxcr1Q3V0P1 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Cpxcr1Q3V0P1 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Cpxcr1Q3V0P1 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Cpxcr1Q3V0P1 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Cpxcr1Q3V0P1 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Cpxcr1Q3V0P1 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.41■■□□□ 1.98
Cpxcr1Q3V0P1 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Cpxcr1Q3V0P1 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Cpxcr1Q3V0P1 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cpxcr1Q3V0P1 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Cpxcr1Q3V0P1 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Cpxcr1Q3V0P1 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC27.18■■□□□ 1.94
Cpxcr1Q3V0P1 CT025624.2-201ENSMUST00000223609 1909 ntBASIC27.16■■□□□ 1.94
Cpxcr1Q3V0P1 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Cpxcr1Q3V0P1 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.12■■□□□ 1.93
Cpxcr1Q3V0P1 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Cpxcr1Q3V0P1 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Cpxcr1Q3V0P1 Gm42596-201ENSMUST00000196305 1958 ntBASIC27.02■■□□□ 1.92
Cpxcr1Q3V0P1 Gm25238-201ENSMUST00000174914 89 ntBASIC27.02■■□□□ 1.92
Cpxcr1Q3V0P1 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Cpxcr1Q3V0P1 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC26.97■■□□□ 1.91
Cpxcr1Q3V0P1 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
Cpxcr1Q3V0P1 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Cpxcr1Q3V0P1 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC26.95■■□□□ 1.9
Cpxcr1Q3V0P1 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Cpxcr1Q3V0P1 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
Cpxcr1Q3V0P1 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Cpxcr1Q3V0P1 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.82■■□□□ 1.88
Cpxcr1Q3V0P1 Gm27325-201ENSMUST00000175467 74 ntBASIC26.78■■□□□ 1.88
Cpxcr1Q3V0P1 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
Cpxcr1Q3V0P1 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC26.73■■□□□ 1.87
Cpxcr1Q3V0P1 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Cpxcr1Q3V0P1 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Cpxcr1Q3V0P1 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.66■■□□□ 1.86
Cpxcr1Q3V0P1 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cpxcr1Q3V0P1 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Cpxcr1Q3V0P1 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cpxcr1Q3V0P1 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Cpxcr1Q3V0P1 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
Cpxcr1Q3V0P1 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
Cpxcr1Q3V0P1 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.51■■□□□ 1.83
Cpxcr1Q3V0P1 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Cpxcr1Q3V0P1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Cpxcr1Q3V0P1 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Cpxcr1Q3V0P1 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
Cpxcr1Q3V0P1 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
Cpxcr1Q3V0P1 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cpxcr1Q3V0P1 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cpxcr1Q3V0P1 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Cpxcr1Q3V0P1 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
Cpxcr1Q3V0P1 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.29■■□□□ 1.8
Cpxcr1Q3V0P1 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cpxcr1Q3V0P1 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cpxcr1Q3V0P1 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms