Protein–RNA interactions for Protein: D3Z6P9

Ddx43, DEAD (Asp-Glu-Ala-Asp) box polypeptide 43, mousemouse

Predictions only

Length 646 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx43D3Z6P9 Gm25239-201ENSMUST00000174915 86 ntBASIC38.07■■■■□ 3.68
Ddx43D3Z6P9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.09■■■■□ 3.21
Ddx43D3Z6P9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
Ddx43D3Z6P9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Ddx43D3Z6P9 Gm15042-201ENSMUST00000120212 883 ntBASIC33.5■■■□□ 2.95
Ddx43D3Z6P9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
Ddx43D3Z6P9 Gm24109-201ENSMUST00000175489 103 ntBASIC32.86■■■□□ 2.85
Ddx43D3Z6P9 Gm15045-201ENSMUST00000117359 883 ntBASIC32.76■■■□□ 2.83
Ddx43D3Z6P9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.73■■■□□ 2.83
Ddx43D3Z6P9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
Ddx43D3Z6P9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
Ddx43D3Z6P9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Ddx43D3Z6P9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ddx43D3Z6P9 Gm23366-201ENSMUST00000175022 89 ntBASIC31.84■■■□□ 2.69
Ddx43D3Z6P9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Ddx43D3Z6P9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.46■■■□□ 2.63
Ddx43D3Z6P9 Psd-208ENSMUST00000224556 2034 ntBASIC31.24■■■□□ 2.59
Ddx43D3Z6P9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
Ddx43D3Z6P9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Ddx43D3Z6P9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Ddx43D3Z6P9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Ddx43D3Z6P9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
Ddx43D3Z6P9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
Ddx43D3Z6P9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.89■■■□□ 2.54
Ddx43D3Z6P9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.88■■■□□ 2.53
Ddx43D3Z6P9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Ddx43D3Z6P9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.75■■■□□ 2.51
Ddx43D3Z6P9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.72■■■□□ 2.51
Ddx43D3Z6P9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ddx43D3Z6P9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.43■■■□□ 2.46
Ddx43D3Z6P9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Ddx43D3Z6P9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Ddx43D3Z6P9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.27■■■□□ 2.44
Ddx43D3Z6P9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.23■■■□□ 2.43
Ddx43D3Z6P9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Ddx43D3Z6P9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ddx43D3Z6P9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ddx43D3Z6P9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
Ddx43D3Z6P9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ddx43D3Z6P9 Gm25238-201ENSMUST00000174914 89 ntBASIC29.96■■■□□ 2.39
Ddx43D3Z6P9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.95■■■□□ 2.39
Ddx43D3Z6P9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.72■■■□□ 2.35
Ddx43D3Z6P9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.65■■■□□ 2.34
Ddx43D3Z6P9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Ddx43D3Z6P9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Ddx43D3Z6P9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Ddx43D3Z6P9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Ddx43D3Z6P9 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Ddx43D3Z6P9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.46■■■□□ 2.31
Ddx43D3Z6P9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.41■■■□□ 2.3
Ddx43D3Z6P9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.4■■■□□ 2.3
Ddx43D3Z6P9 Gm27325-201ENSMUST00000175467 74 ntBASIC29.38■■■□□ 2.29
Ddx43D3Z6P9 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
Ddx43D3Z6P9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
Ddx43D3Z6P9 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
Ddx43D3Z6P9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Ddx43D3Z6P9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.14■■■□□ 2.25
Ddx43D3Z6P9 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
Ddx43D3Z6P9 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.1■■■□□ 2.25
Ddx43D3Z6P9 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ddx43D3Z6P9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.09■■■□□ 2.25
Ddx43D3Z6P9 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Ddx43D3Z6P9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC29.04■■■□□ 2.24
Ddx43D3Z6P9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.99■■■□□ 2.23
Ddx43D3Z6P9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
Ddx43D3Z6P9 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Ddx43D3Z6P9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Ddx43D3Z6P9 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ddx43D3Z6P9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
Ddx43D3Z6P9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
Ddx43D3Z6P9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.88■■■□□ 2.21
Ddx43D3Z6P9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Ddx43D3Z6P9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Ddx43D3Z6P9 Rab21-202ENSMUST00000218831 843 ntBASIC28.72■■■□□ 2.19
Ddx43D3Z6P9 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.72■■■□□ 2.19
Ddx43D3Z6P9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Ddx43D3Z6P9 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Ddx43D3Z6P9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC28.62■■■□□ 2.17
Ddx43D3Z6P9 Gm25262-201ENSMUST00000174934 133 ntBASIC28.62■■■□□ 2.17
Ddx43D3Z6P9 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.61■■■□□ 2.17
Ddx43D3Z6P9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Ddx43D3Z6P9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.6■■■□□ 2.17
Ddx43D3Z6P9 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.16
Ddx43D3Z6P9 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.49■■■□□ 2.15
Ddx43D3Z6P9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
Ddx43D3Z6P9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
Ddx43D3Z6P9 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ddx43D3Z6P9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ddx43D3Z6P9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.29■■■□□ 2.12
Ddx43D3Z6P9 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Ddx43D3Z6P9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC28.27■■■□□ 2.12
Ddx43D3Z6P9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Ddx43D3Z6P9 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Ddx43D3Z6P9 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
Ddx43D3Z6P9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Ddx43D3Z6P9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ddx43D3Z6P9 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Ddx43D3Z6P9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.1■■■□□ 2.09
Ddx43D3Z6P9 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
Ddx43D3Z6P9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms