Protein–RNA interactions for Protein: P01878

Ig alpha chain C region, mousemouse

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01878 Gm25239-201ENSMUST00000174915 86 ntBASIC41.04■■■■■ 4.16
P01878 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC37.99■■■■□ 3.67
P01878 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC37.39■■■■□ 3.58
P01878 Gm15042-201ENSMUST00000120212 883 ntBASIC35.75■■■■□ 3.31
P01878 Gm24109-201ENSMUST00000175489 103 ntBASIC35.67■■■■□ 3.3
P01878 Gm15045-201ENSMUST00000117359 883 ntBASIC35.03■■■■□ 3.2
P01878 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.79■■■■□ 3.16
P01878 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
P01878 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC34.66■■■■□ 3.14
P01878 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC34.32■■■■□ 3.08
P01878 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC34.24■■■■□ 3.07
P01878 Gm23366-201ENSMUST00000175022 89 ntBASIC34.21■■■■□ 3.07
P01878 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC34.07■■■■□ 3.04
P01878 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.67■■■□□ 2.98
P01878 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
P01878 AC153911.1-202ENSMUST00000218534 1034 ntBASIC33.24■■■□□ 2.91
P01878 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC33.03■■■□□ 2.88
P01878 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC33.03■■■□□ 2.88
P01878 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33■■■□□ 2.87
P01878 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.92■■■□□ 2.86
P01878 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC32.92■■■□□ 2.86
P01878 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC32.83■■■□□ 2.85
P01878 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
P01878 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
P01878 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
P01878 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC32.53■■■□□ 2.8
P01878 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC32.52■■■□□ 2.8
P01878 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
P01878 Gm25238-201ENSMUST00000174914 89 ntBASIC32.46■■■□□ 2.79
P01878 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
P01878 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
P01878 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC32.35■■■□□ 2.77
P01878 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC32.3■■■□□ 2.76
P01878 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
P01878 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.17■■■□□ 2.74
P01878 Psd-208ENSMUST00000224556 2034 ntBASIC31.98■■■□□ 2.71
P01878 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC31.92■■■□□ 2.7
P01878 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC31.77■■■□□ 2.68
P01878 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.61■■■□□ 2.65
P01878 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC31.56■■■□□ 2.64
P01878 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
P01878 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
P01878 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC31.41■■■□□ 2.62
P01878 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC31.39■■■□□ 2.62
P01878 Gm27325-201ENSMUST00000175467 74 ntBASIC31.35■■■□□ 2.61
P01878 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
P01878 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
P01878 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC31.15■■■□□ 2.58
P01878 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
P01878 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
P01878 Gm25262-201ENSMUST00000174934 133 ntBASIC31.04■■■□□ 2.56
P01878 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.99■■■□□ 2.55
P01878 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC30.88■■■□□ 2.53
P01878 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
P01878 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.86■■■□□ 2.53
P01878 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
P01878 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC30.81■■■□□ 2.52
P01878 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
P01878 Rab21-202ENSMUST00000218831 843 ntBASIC30.81■■■□□ 2.52
P01878 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC30.71■■■□□ 2.51
P01878 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC30.59■■■□□ 2.49
P01878 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
P01878 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC30.54■■■□□ 2.48
P01878 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
P01878 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
P01878 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC30.52■■■□□ 2.48
P01878 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC30.51■■■□□ 2.47
P01878 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC30.49■■■□□ 2.47
P01878 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
P01878 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC30.45■■■□□ 2.47
P01878 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
P01878 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC30.42■■■□□ 2.46
P01878 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
P01878 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
P01878 Gm26115-201ENSMUST00000175605 87 ntBASIC30.29■■■□□ 2.44
P01878 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
P01878 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC30.26■■■□□ 2.43
P01878 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
P01878 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
P01878 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
P01878 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
P01878 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
P01878 Gm8109-201ENSMUST00000194076 746 ntBASIC30.16■■■□□ 2.42
P01878 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
P01878 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
P01878 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
P01878 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC30.09■■■□□ 2.41
P01878 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC30.07■■■□□ 2.4
P01878 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
P01878 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC30.03■■■□□ 2.4
P01878 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
P01878 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.99■■■□□ 2.39
P01878 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC29.93■■■□□ 2.38
P01878 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
P01878 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
P01878 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
P01878 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.85■■■□□ 2.37
P01878 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC29.81■■■□□ 2.36
P01878 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
P01878 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.81■■■□□ 2.36
Retrieved 100 of 76,532 protein–RNA pairs in 8 ms