RNA–Protein interactions for RNA: YPR108W

RPN7, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN7, Length 1,290 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN7YPR108W CDC6P09119 513 aa6.41□□□□□ -1.38
RPN7YPR108W PHO13P19881 312 aa6.41□□□□□ -1.38
RPN7YPR108W ADP1P25371 1049 aa6.41□□□□□ -1.38
RPN7YPR108W ICL1P28240 557 aaPredicted RBP6.41□□□□□ -1.38
RPN7YPR108W MRF1P30775 413 aaPredicted RBP6.41□□□□□ -1.38
RPN7YPR108W LTV1P34078 463 aa6.41□□□□□ -1.38
RPN7YPR108W ISW1P38144 1129 aa6.41□□□□□ -1.38
RPN7YPR108W YFL034WP43564 1073 aa6.41□□□□□ -1.38
RPN7YPR108W APT1P49435 187 aaKnown RBP6.41□□□□□ -1.38
RPN7YPR108W UBA2P52488 636 aa6.41□□□□□ -1.38
RPN7YPR108W MAL13P53338 473 aa6.41□□□□□ -1.38
RPN7YPR108W BUD20Q08004 166 aaPredicted RBP6.41□□□□□ -1.38
RPN7YPR108W NOP14Q99207 810 aaKnown RBP6.41□□□□□ -1.38
RPN7YPR108W CAF20P12962 161 aaKnown RBP6.4□□□□□ -1.38
RPN7YPR108W MBR1P23493 339 aa6.4□□□□□ -1.38
RPN7YPR108W RPS7AP26786 190 aaKnown RBP6.4□□□□□ -1.38
RPN7YPR108W DPB3P27344 201 aa6.4□□□□□ -1.38
RPN7YPR108W URA1P28272 314 aaPredicted RBP6.4□□□□□ -1.38
RPN7YPR108W NUD1P32336 851 aa6.4□□□□□ -1.38
RPN7YPR108W AFG2P32794 780 aa6.4□□□□□ -1.38
RPN7YPR108W CNS1P33313 385 aa6.4□□□□□ -1.38
RPN7YPR108W PGM1P33401 570 aaKnown RBP6.4□□□□□ -1.38
RPN7YPR108W OLA1P38219 394 aaKnown RBP6.4□□□□□ -1.38
RPN7YPR108W VAB2P40003 282 aa6.4□□□□□ -1.38
RPN7YPR108W NIT1P40447 199 aa6.4□□□□□ -1.38
RPN7YPR108W THI6P41835 540 aa6.4□□□□□ -1.38
RPN7YPR108W ISM1P48526 1002 aa6.4□□□□□ -1.38
RPN7YPR108W NUP42P49686 430 aaKnown RBP6.4□□□□□ -1.38
RPN7YPR108W CBK1P53894 756 aa6.4□□□□□ -1.38
RPN7YPR108W OYE2Q03558 400 aaKnown RBP6.4□□□□□ -1.38
RPN7YPR108W GIS4Q04233 774 aa6.4□□□□□ -1.38
RPN7YPR108W PSR2Q07949 397 aa6.4□□□□□ -1.38
RPN7YPR108W DUR1,2P32528 1835 aaKnown RBP6.4□□□□□ -1.38
RPN7YPR108W APL1P27351 700 aa6.39□□□□□ -1.39
RPN7YPR108W NUP82P40368 713 aa6.39□□□□□ -1.39
RPN7YPR108W EBS1Q03466 884 aaKnown RBP6.39□□□□□ -1.39
RPN7YPR108W RBA50Q04418 439 aa6.39□□□□□ -1.39
RPN7YPR108W SVF1Q05515 481 aa6.39□□□□□ -1.39
RPN7YPR108W ATG9Q12142 997 aa6.39□□□□□ -1.39
RPN7YPR108W MED1Q12321 566 aa6.39□□□□□ -1.39
RPN7YPR108W OSH2Q12451 1283 aa6.39□□□□□ -1.39
RPN7YPR108W PDC1P06169 563 aaKnown RBP6.38□□□□□ -1.39
RPN7YPR108W STI1P15705 589 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
RPN7YPR108W CDC60P26637 1090 aaKnown RBP6.38□□□□□ -1.39
RPN7YPR108W PSE1P32337 1089 aaKnown RBP6.38□□□□□ -1.39
RPN7YPR108W UBC6P33296 250 aaPredicted RBP6.38□□□□□ -1.39
RPN7YPR108W UBP13P38187 747 aa6.38□□□□□ -1.39
RPN7YPR108W SPC72P39723 622 aa6.38□□□□□ -1.39
RPN7YPR108W PSY2P40164 858 aa6.38□□□□□ -1.39
RPN7YPR108W CSM2P40465 213 aa6.38□□□□□ -1.39
RPN7YPR108W MAD1P40957 749 aa6.38□□□□□ -1.39
RPN7YPR108W LYS14P40971 790 aa6.38□□□□□ -1.39
RPN7YPR108W ASE1P50275 885 aa6.38□□□□□ -1.39
RPN7YPR108W YPR078CQ06813 372 aa6.38□□□□□ -1.39
RPN7YPR108W NEW1Q08972 1196 aaKnown RBP6.38□□□□□ -1.39
RPN7YPR108W RRP6Q12149 733 aaKnown RBP6.38□□□□□ -1.39
RPN7YPR108W AIM7Q12156 149 aa6.38□□□□□ -1.39
RPN7YPR108W TUS1Q06412 1307 aa6.37□□□□□ -1.39
RPN7YPR108W PET123P17558 318 aa6.37□□□□□ -1.39
RPN7YPR108W SPO11P23179 398 aa6.37□□□□□ -1.39
RPN7YPR108W PER1P25625 357 aa6.37□□□□□ -1.39
RPN7YPR108W ATG19P35193 415 aa6.37□□□□□ -1.39
RPN7YPR108W MCX1P38323 520 aaPredicted RBP6.37□□□□□ -1.39
RPN7YPR108W YHL050CP38721 697 aa6.37□□□□□ -1.39
RPN7YPR108W OSW7P43611 510 aa6.37□□□□□ -1.39
RPN7YPR108W AFT2Q08957 416 aa6.37□□□□□ -1.39
RPN7YPR108W LAP2Q10740 671 aa6.37□□□□□ -1.39
RPN7YPR108W HMI1Q12039 706 aa6.37□□□□□ -1.39
RPN7YPR108W PCK1P10963 549 aa6.36□□□□□ -1.39
RPN7YPR108W SSB1P11484 613 aaKnown RBP6.36□□□□□ -1.39
RPN7YPR108W SEC23P15303 768 aaKnown RBP6.36□□□□□ -1.39
RPN7YPR108W CKI1P20485 582 aa6.36□□□□□ -1.39
RPN7YPR108W RAD53P22216 821 aa6.36□□□□□ -1.39
RPN7YPR108W MCM4P30665 933 aaKnown RBP6.36□□□□□ -1.39
RPN7YPR108W SRP40P32583 406 aaPredicted RBP6.36□□□□□ -1.39
RPN7YPR108W SEC8P32855 1065 aa6.36□□□□□ -1.39
RPN7YPR108W YKL091CP33324 310 aaKnown RBP6.36□□□□□ -1.39
RPN7YPR108W NIP100P33420 868 aa6.36□□□□□ -1.39
RPN7YPR108W SSB2P40150 613 aaKnown RBP6.36□□□□□ -1.39
RPN7YPR108W CLA4P48562 842 aa6.36□□□□□ -1.39
RPN7YPR108W YGR237CP50089 785 aa6.36□□□□□ -1.39
RPN7YPR108W ZPR1P53303 486 aaKnown RBP6.36□□□□□ -1.39
RPN7YPR108W JJJ1P53863 590 aa6.36□□□□□ -1.39
RPN7YPR108W TRM44Q02648 567 aaKnown RBP6.36□□□□□ -1.39
RPN7YPR108W PHM6Q05637 104 aa6.36□□□□□ -1.39
RPN7YPR108W VAC14Q06708 880 aa6.36□□□□□ -1.39
RPN7YPR108W ATG20Q07528 640 aa6.36□□□□□ -1.39
RPN7YPR108W SPO75Q07798 868 aa6.36□□□□□ -1.39
RPN7YPR108W RUD3Q12234 484 aaKnown RBP6.36□□□□□ -1.39
RPN7YPR108W PTC5Q12511 572 aa6.36□□□□□ -1.39
RPN7YPR108W FIG2P25653 1609 aa6.36□□□□□ -1.39
RPN7YPR108W CDC19P00549 500 aaKnown RBP6.35□□□□□ -1.39
RPN7YPR108W CDC8P00572 216 aa6.35□□□□□ -1.39
RPN7YPR108W PRT1P06103 763 aaKnown RBP6.35□□□□□ -1.39
RPN7YPR108W MTF2P10849 440 aa6.35□□□□□ -1.39
RPN7YPR108W MIP1P15801 1254 aa6.35□□□□□ -1.39
RPN7YPR108W ACE2P21192 770 aa6.35□□□□□ -1.39
RPN7YPR108W STE11P23561 717 aa6.35□□□□□ -1.39
RPN7YPR108W SQT1P35184 431 aa6.35□□□□□ -1.39
RPN7YPR108W OCT1P35999 772 aa6.35□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 36.4 ms