RNA–Protein interactions for RNA: YOR378W

AMF1, Transcript of Putative paralog of ATR1, yeastyeast

Gene AMF1, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AMF1YOR378W PIH1P38768 344 aa9.44□□□□□ -0.9
AMF1YOR378W BCD1P38772 366 aa9.44□□□□□ -0.9
AMF1YOR378W GUP1P53154 560 aa9.44□□□□□ -0.9
AMF1YOR378W YGL039WP53183 348 aaKnown RBP9.44□□□□□ -0.9
AMF1YOR378W DUS1P53759 423 aaKnown RBP9.44□□□□□ -0.9
AMF1YOR378W SEC5P89102 971 aa9.44□□□□□ -0.9
AMF1YOR378W SVF1Q05515 481 aa9.44□□□□□ -0.9
AMF1YOR378W TLG2Q08144 397 aa9.44□□□□□ -0.9
AMF1YOR378W MSC6Q08818 692 aaKnown RBP9.44□□□□□ -0.9
AMF1YOR378W PFK1P16861 987 aaKnown RBP9.43□□□□□ -0.9
AMF1YOR378W MIC60P36112 540 aa9.43□□□□□ -0.9
AMF1YOR378W DBP7P36120 742 aaKnown RBP9.43□□□□□ -0.9
AMF1YOR378W FIS1P40515 155 aa9.43□□□□□ -0.9
AMF1YOR378W TFG2P41896 400 aaPredicted RBP9.43□□□□□ -0.9
AMF1YOR378W VPS53P47061 822 aa9.43□□□□□ -0.9
AMF1YOR378W GFD1Q04839 188 aaKnown RBP9.43□□□□□ -0.9
AMF1YOR378W MET7Q08645 548 aa9.43□□□□□ -0.9
AMF1YOR378W TVP38P36164 337 aa9.42□□□□□ -0.9
AMF1YOR378W PPS1P38148 807 aa9.42□□□□□ -0.9
AMF1YOR378W YGR237CP50089 785 aa9.42□□□□□ -0.9
AMF1YOR378W FKS1P38631 1876 aaKnown RBP9.42□□□□□ -0.9
AMF1YOR378W PRE10P21242 288 aaKnown RBP RIP-Chip data9.41□□□□□ -0.9not detected
AMF1YOR378W RPN3P40016 523 aaKnown RBP9.41□□□□□ -0.9
AMF1YOR378W ULP2P40537 1034 aaPredicted RBP9.41□□□□□ -0.9
AMF1YOR378W YMR321CQ04898 105 aa9.41□□□□□ -0.9
AMF1YOR378W SPP382Q06411 708 aaPredicted RBP9.41□□□□□ -0.9
AMF1YOR378W TRM11Q12463 433 aa9.41□□□□□ -0.9
AMF1YOR378W WAR1Q03631 944 aa9.41□□□□□ -0.9
AMF1YOR378W TFC8Q12308 588 aa9.41□□□□□ -0.9
AMF1YOR378W CDC37P06101 506 aaKnown RBP9.4□□□□□ -0.91
AMF1YOR378W TCP1P12612 559 aaKnown RBP9.4□□□□□ -0.91
AMF1YOR378W OM45P16547 393 aa9.4□□□□□ -0.91
AMF1YOR378W YUR1P26725 428 aa9.4□□□□□ -0.91
AMF1YOR378W TIM23P32897 222 aa9.4□□□□□ -0.91
AMF1YOR378W YKL091CP33324 310 aaKnown RBP9.4□□□□□ -0.91
AMF1YOR378W MPE1P35728 441 aaKnown RBP9.4□□□□□ -0.91
AMF1YOR378W PSY4P38193 441 aa9.4□□□□□ -0.91
AMF1YOR378W YFL034WP43564 1073 aa9.4□□□□□ -0.91
AMF1YOR378W NCS6P53088 359 aa9.4□□□□□ -0.91
AMF1YOR378W LSC2P53312 427 aa9.4□□□□□ -0.91
AMF1YOR378W CDC48P25694 835 aaKnown RBP9.39□□□□□ -0.91
AMF1YOR378W PSO2P30620 661 aa9.39□□□□□ -0.91
AMF1YOR378W YEL025CP39991 1188 aa9.39□□□□□ -0.91
AMF1YOR378W MDR1P53258 950 aa9.39□□□□□ -0.91
AMF1YOR378W NCS2P53923 493 aaPredicted RBP9.39□□□□□ -0.91
AMF1YOR378W ICL2Q12031 575 aa9.39□□□□□ -0.91
AMF1YOR378W YLL058WQ12198 575 aa9.39□□□□□ -0.91
AMF1YOR378W MRC1P25588 1096 aa9.38□□□□□ -0.91
AMF1YOR378W HUL4P40985 892 aa9.38□□□□□ -0.91
AMF1YOR378W AIP1P46680 615 aaKnown RBP9.38□□□□□ -0.91
AMF1YOR378W YDL057WQ07379 328 aa9.38□□□□□ -0.91
AMF1YOR378W SMC5Q08204 1093 aa9.38□□□□□ -0.91
AMF1YOR378W TMA16Q08687 178 aa9.38□□□□□ -0.91
AMF1YOR378W YDR461C-AQ2V2P7 80 aa9.38□□□□□ -0.91
AMF1YOR378W PCK1P10963 549 aa9.37□□□□□ -0.91
AMF1YOR378W ATG19P35193 415 aa9.37□□□□□ -0.91
AMF1YOR378W EBP2P36049 427 aaKnown RBP9.37□□□□□ -0.91
AMF1YOR378W SAP190P36123 1033 aa9.37□□□□□ -0.91
AMF1YOR378W PGM2P37012 569 aaKnown RBP9.37□□□□□ -0.91
AMF1YOR378W RPS7BP48164 190 aaKnown RBP9.37□□□□□ -0.91
AMF1YOR378W EBS1Q03466 884 aaKnown RBP9.37□□□□□ -0.91
AMF1YOR378W CUR1Q06469 252 aa9.37□□□□□ -0.91
AMF1YOR378W TCO89Q08921 799 aa9.37□□□□□ -0.91
AMF1YOR378W YPL216WQ08964 1102 aa9.37□□□□□ -0.91
AMF1YOR378W YPL277CQ08989 487 aa9.37□□□□□ -0.91
AMF1YOR378W MAK16P10962 306 aaPredicted RBP9.36□□□□□ -0.91
AMF1YOR378W POX1P13711 748 aa9.36□□□□□ -0.91
AMF1YOR378W DBP5P20449 482 aaKnown RBP9.36□□□□□ -0.91
AMF1YOR378W MCM2P29469 868 aa9.36□□□□□ -0.91
AMF1YOR378W MRF1P30775 413 aaPredicted RBP9.36□□□□□ -0.91
AMF1YOR378W YET1P35723 206 aa9.36□□□□□ -0.91
AMF1YOR378W UBP13P38187 747 aa9.36□□□□□ -0.91
AMF1YOR378W BIM1P40013 344 aa9.36□□□□□ -0.91
AMF1YOR378W MGA2P40578 1113 aa9.36□□□□□ -0.91
AMF1YOR378W TOS3P43637 560 aa9.36□□□□□ -0.91
AMF1YOR378W VID30P53076 958 aa9.36□□□□□ -0.91
AMF1YOR378W TOF1P53840 1238 aa9.36□□□□□ -0.91
AMF1YOR378W GPI13Q07830 1017 aa9.36□□□□□ -0.91
AMF1YOR378W YOL075CQ08234 1294 aa9.36□□□□□ -0.91
AMF1YOR378W RPC53P25441 422 aa9.36□□□□□ -0.91
AMF1YOR378W RME1P32338 300 aaKnown RBP9.36□□□□□ -0.91
AMF1YOR378W PSF2P40359 213 aa9.36□□□□□ -0.91
AMF1YOR378W NBP1P52919 319 aaPredicted RBP9.36□□□□□ -0.91
AMF1YOR378W SCS3P53012 380 aa9.36□□□□□ -0.91
AMF1YOR378W ARK1P53974 638 aa9.36□□□□□ -0.91
AMF1YOR378W ROD1Q02805 837 aa9.36□□□□□ -0.91
AMF1YOR378W COG4Q06096 861 aa9.36□□□□□ -0.91
AMF1YOR378W MED1Q12321 566 aa9.36□□□□□ -0.91
AMF1YOR378W TOM1Q03280 3268 aa9.35□□□□□ -0.91
AMF1YOR378W PDC1P06169 563 aaKnown RBP9.35□□□□□ -0.91
AMF1YOR378W CTM1P38818 585 aa9.35□□□□□ -0.91
AMF1YOR378W NOC3Q07896 663 aaPredicted RBP9.35□□□□□ -0.91
AMF1YOR378W YAP7Q08182 245 aa9.35□□□□□ -0.91
AMF1YOR378W DED1P06634 604 aaKnown RBP9.34□□□□□ -0.91
AMF1YOR378W PHO8P11491 566 aa9.34□□□□□ -0.91
AMF1YOR378W DAL7P21826 554 aa9.34□□□□□ -0.91
AMF1YOR378W MSH3P25336 1018 aa9.34□□□□□ -0.91
AMF1YOR378W YSC83P32792 385 aa9.34□□□□□ -0.91
AMF1YOR378W COT1P32798 439 aa9.34□□□□□ -0.91
AMF1YOR378W VPS35P34110 944 aa9.34□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 82.8 ms