RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C AIM21P40563 679 aa4.41□□□□□ -1.7
VHS3YOR054C AXL1P40851 1208 aa4.41□□□□□ -1.7
VHS3YOR054C MAD1P40957 749 aa4.41□□□□□ -1.7
VHS3YOR054C HFM1P51979 1187 aa4.41□□□□□ -1.7
VHS3YOR054C DSD1P53095 428 aa4.41□□□□□ -1.7
VHS3YOR054C ESF2P53743 316 aaKnown RBP4.41□□□□□ -1.7
VHS3YOR054C YKR005CQ02203 525 aa4.41□□□□□ -1.7
VHS3YOR054C TAP42Q04372 366 aa4.41□□□□□ -1.7
VHS3YOR054C YMR111CQ04461 462 aaPredicted RBP4.41□□□□□ -1.7
VHS3YOR054C SPC24Q04477 213 aa4.41□□□□□ -1.7
VHS3YOR054C BUD7Q08754 746 aa4.41□□□□□ -1.7
VHS3YOR054C COBP00163 385 aa4.4□□□□□ -1.7
VHS3YOR054C CDC8P00572 216 aa4.4□□□□□ -1.7
VHS3YOR054C LPD1P09624 499 aaKnown RBP4.4□□□□□ -1.7
VHS3YOR054C ADH4P10127 382 aa4.4□□□□□ -1.7
VHS3YOR054C SEC23P15303 768 aaKnown RBP4.4□□□□□ -1.7
VHS3YOR054C GCD7P32502 381 aaPredicted RBP4.4□□□□□ -1.7
VHS3YOR054C RTG2P32608 588 aaKnown RBP4.4□□□□□ -1.7
VHS3YOR054C SEC8P32855 1065 aa4.4□□□□□ -1.7
VHS3YOR054C YKT6P36015 200 aaKnown RBP4.4□□□□□ -1.7
VHS3YOR054C PPX1P38698 397 aa4.4□□□□□ -1.7
VHS3YOR054C ETP1P38748 585 aaKnown RBP4.4□□□□□ -1.7
VHS3YOR054C ORC6P38826 435 aa4.4□□□□□ -1.7
VHS3YOR054C SEC27P41811 889 aaKnown RBP4.4□□□□□ -1.7
VHS3YOR054C YJL171CP46992 396 aa4.4□□□□□ -1.7
VHS3YOR054C PEX21P50091 288 aa4.4□□□□□ -1.7
VHS3YOR054C UTP22P53254 1237 aaPredicted RBP4.4□□□□□ -1.7
VHS3YOR054C COG6P53959 839 aa4.4□□□□□ -1.7
VHS3YOR054C GIR2Q03768 265 aaPredicted RBP4.4□□□□□ -1.7
VHS3YOR054C MRD1Q06106 887 aaKnown RBP4.4□□□□□ -1.7
VHS3YOR054C NOP12Q08208 459 aaKnown RBP4.4□□□□□ -1.7
VHS3YOR054C IES3Q12345 250 aa4.4□□□□□ -1.7
VHS3YOR054C HCA4P20448 770 aaKnown RBP4.39□□□□□ -1.71
VHS3YOR054C PAP1P29468 568 aaKnown RBP4.39□□□□□ -1.71
VHS3YOR054C HEK2P38199 381 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71 RIP-Chip
VHS3YOR054C MCX1P38323 520 aaPredicted RBP4.39□□□□□ -1.71
VHS3YOR054C YLF2P38746 405 aa4.39□□□□□ -1.71
VHS3YOR054C SSZ1P38788 538 aaKnown RBP4.39□□□□□ -1.71
VHS3YOR054C ARB1P40024 610 aaKnown RBP4.39□□□□□ -1.71
VHS3YOR054C UBP6P43593 499 aaKnown RBP4.39□□□□□ -1.71
VHS3YOR054C ENP2P48234 707 aaKnown RBP4.39□□□□□ -1.71
VHS3YOR054C TEL2P53038 688 aa4.39□□□□□ -1.71
VHS3YOR054C PRP43P53131 767 aaKnown RBP4.39□□□□□ -1.71
VHS3YOR054C LSG1P53145 640 aaKnown RBP4.39□□□□□ -1.71
VHS3YOR054C BNI4P53858 892 aa4.39□□□□□ -1.71
VHS3YOR054C UFD2P54860 961 aa4.39□□□□□ -1.71
VHS3YOR054C MUB1Q03162 620 aa4.39□□□□□ -1.71
VHS3YOR054C YML108WQ03759 105 aa4.39□□□□□ -1.71
VHS3YOR054C SXM1Q04175 944 aaKnown RBP4.39□□□□□ -1.71
VHS3YOR054C YLH47Q06493 454 aa4.39□□□□□ -1.71
VHS3YOR054C PSK2Q08217 1101 aa4.39□□□□□ -1.71
VHS3YOR054C NOB1Q08444 459 aaKnown RBP4.39□□□□□ -1.71
VHS3YOR054C OSW1Q08692 278 aa4.39□□□□□ -1.71
VHS3YOR054C YPR204WQ08995 1032 aa4.39□□□□□ -1.71
VHS3YOR054C SGT2Q12118 346 aaKnown RBP4.39□□□□□ -1.71
VHS3YOR054C GYP5Q12344 894 aa4.39□□□□□ -1.71
VHS3YOR054C BRR1Q99177 341 aaPredicted RBP4.39□□□□□ -1.71
VHS3YOR054C ARG4P04076 463 aaPredicted RBP4.39□□□□□ -1.71
VHS3YOR054C RGR1P19263 1082 aa4.39□□□□□ -1.71
VHS3YOR054C SEC65P29478 273 aa4.39□□□□□ -1.71
VHS3YOR054C PPH3P32345 308 aa4.39□□□□□ -1.71
VHS3YOR054C CBF2P32504 956 aa4.39□□□□□ -1.71
VHS3YOR054C RAD24P32641 659 aa4.39□□□□□ -1.71
VHS3YOR054C STE13P33894 931 aa4.39□□□□□ -1.71
VHS3YOR054C RFT1P38206 574 aaPredicted RBP4.39□□□□□ -1.71
VHS3YOR054C SOL3P38858 249 aa4.39□□□□□ -1.71
VHS3YOR054C ATP25Q03153 612 aa4.39□□□□□ -1.71
VHS3YOR054C DNL4Q08387 944 aaPredicted RBP4.39□□□□□ -1.71
VHS3YOR054C RIB2Q12362 591 aaKnown RBP4.39□□□□□ -1.71
VHS3YOR054C RTP1Q12751 981 aa4.39□□□□□ -1.71
VHS3YOR054C ENO2P00925 437 aaKnown RBP4.38□□□□□ -1.71
VHS3YOR054C SBP1P10080 294 aaKnown RBP4.38□□□□□ -1.71
VHS3YOR054C MCM4P30665 933 aaKnown RBP4.38□□□□□ -1.71
VHS3YOR054C KDX1P36005 433 aa4.38□□□□□ -1.71
VHS3YOR054C BOI1P38041 980 aaKnown RBP4.38□□□□□ -1.71
VHS3YOR054C HSM3P38348 480 aa4.38□□□□□ -1.71
VHS3YOR054C SIP3P38717 1229 aa4.38□□□□□ -1.71
VHS3YOR054C EFM4P40516 257 aa4.38□□□□□ -1.71
VHS3YOR054C MEC3Q02574 474 aa4.38□□□□□ -1.71
VHS3YOR054C SPO71Q03868 1245 aa4.38□□□□□ -1.71
VHS3YOR054C PPM1Q04081 328 aa4.38□□□□□ -1.71
VHS3YOR054C ERB1Q04660 807 aaKnown RBP4.38□□□□□ -1.71
VHS3YOR054C ALR1Q08269 859 aa4.38□□□□□ -1.71
VHS3YOR054C SAM3Q08986 587 aa4.38□□□□□ -1.71
VHS3YOR054C MSH5Q12175 901 aa4.38□□□□□ -1.71
VHS3YOR054C GPR1Q12361 961 aa4.38□□□□□ -1.71
VHS3YOR054C LEU2P04173 364 aaPredicted RBP4.38□□□□□ -1.71
VHS3YOR054C CTT1P06115 562 aa4.38□□□□□ -1.71
VHS3YOR054C PIF1P07271 859 aa4.38□□□□□ -1.71
VHS3YOR054C ADE2P21264 571 aaKnown RBP4.38□□□□□ -1.71
VHS3YOR054C REC107P21651 314 aa4.38□□□□□ -1.71
VHS3YOR054C BIO2P32451 375 aa4.38□□□□□ -1.71
VHS3YOR054C SQT1P35184 431 aa4.38□□□□□ -1.71
VHS3YOR054C MRP8P35719 219 aa4.38□□□□□ -1.71
VHS3YOR054C EFM2P38347 419 aa4.38□□□□□ -1.71
VHS3YOR054C SAK1P38990 1142 aa4.38□□□□□ -1.71
VHS3YOR054C YEL023CP39992 682 aa4.38□□□□□ -1.71
VHS3YOR054C ATG3P40344 310 aa4.38□□□□□ -1.71
VHS3YOR054C SPO22P40511 975 aa4.38□□□□□ -1.71
VHS3YOR054C SAP185P40856 1058 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms