RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W SCS3P53012 380 aa4.33□□□□□ -1.72
ROD1YOR018W DUS3Q06053 668 aaKnown RBP4.33□□□□□ -1.72
ROD1YOR018W YDL129WQ07555 291 aa4.33□□□□□ -1.72
ROD1YOR018W AFT2Q08957 416 aa4.33□□□□□ -1.72
ROD1YOR018W YDL206WQ12424 762 aa4.33□□□□□ -1.72
ROD1YOR018W CDC15P27636 974 aa4.32□□□□□ -1.72
ROD1YOR018W SUL1P38359 859 aa4.32□□□□□ -1.72
ROD1YOR018W NPR3P38742 1146 aa4.32□□□□□ -1.72
ROD1YOR018W PAC1P39946 494 aaKnown RBP4.32□□□□□ -1.72
ROD1YOR018W BRE2P43132 505 aa4.32□□□□□ -1.72
ROD1YOR018W SNU71P53207 620 aaKnown RBP4.32□□□□□ -1.72
ROD1YOR018W COG8Q04632 607 aa4.32□□□□□ -1.72
ROD1YOR018W SGD1Q06132 899 aa4.32□□□□□ -1.72
ROD1YOR018W MMR1Q06324 491 aa4.32□□□□□ -1.72
ROD1YOR018W PGI1P12709 554 aaKnown RBP4.32□□□□□ -1.72
ROD1YOR018W RPL8AP17076 256 aaKnown RBP4.32□□□□□ -1.72
ROD1YOR018W ELM1P32801 640 aa4.32□□□□□ -1.72
ROD1YOR018W HYR1P40581 163 aaKnown RBP4.32□□□□□ -1.72
ROD1YOR018W ALG2P43636 503 aa4.32□□□□□ -1.72
ROD1YOR018W GDE1Q02979 1223 aa4.32□□□□□ -1.72
ROD1YOR018W WHI4Q07655 649 aaKnown RBP4.32□□□□□ -1.72
ROD1YOR018W ARP6Q12509 438 aa4.32□□□□□ -1.72
ROD1YOR018W DDP1Q99321 188 aaKnown RBP4.32□□□□□ -1.72
ROD1YOR018W NOC2P39744 710 aaKnown RBP4.31□□□□□ -1.72
ROD1YOR018W YGR153WP48238 217 aa4.31□□□□□ -1.72
ROD1YOR018W DSE4P53753 1117 aa4.31□□□□□ -1.72
ROD1YOR018W SLK19Q08581 821 aaKnown RBP4.31□□□□□ -1.72
ROD1YOR018W TMA16Q08687 178 aa4.31□□□□□ -1.72
ROD1YOR018W ILV1P00927 576 aaKnown RBP4.31□□□□□ -1.72
ROD1YOR018W RPS9BP05755 195 aaKnown RBP4.31□□□□□ -1.72
ROD1YOR018W ATE1P16639 503 aa4.31□□□□□ -1.72
ROD1YOR018W CDC3P32457 520 aaKnown RBP4.31□□□□□ -1.72
ROD1YOR018W UTR4P32626 227 aa4.31□□□□□ -1.72
ROD1YOR018W UBP11P36026 717 aa4.31□□□□□ -1.72
ROD1YOR018W PSY4P38193 441 aa4.31□□□□□ -1.72
ROD1YOR018W PAN5P38787 379 aa4.31□□□□□ -1.72
ROD1YOR018W FIG4P42837 879 aa4.31□□□□□ -1.72
ROD1YOR018W SAD1P43589 448 aa4.31□□□□□ -1.72
ROD1YOR018W SDA1P53313 767 aaKnown RBP4.31□□□□□ -1.72
ROD1YOR018W ORC4P54791 529 aa4.31□□□□□ -1.72
ROD1YOR018W VIP1Q06685 1146 aaKnown RBP4.31□□□□□ -1.72
ROD1YOR018W YPR097WQ06839 1073 aa4.31□□□□□ -1.72
ROD1YOR018W FRA1Q07825 749 aa4.31□□□□□ -1.72
ROD1YOR018W YOR296WQ08748 1289 aa4.31□□□□□ -1.72
ROD1YOR018W MYO1P08964 1928 aa4.3□□□□□ -1.72
ROD1YOR018W YEL076C-AP0CX16 216 aa4.3□□□□□ -1.72
ROD1YOR018W YLR464WP0CX17 216 aa4.3□□□□□ -1.72
ROD1YOR018W MCM2P29469 868 aa4.3□□□□□ -1.72
ROD1YOR018W SAC6P32599 642 aaKnown RBP4.3□□□□□ -1.72
ROD1YOR018W TGL1P34163 548 aa4.3□□□□□ -1.72
ROD1YOR018W TOM71P38825 639 aaKnown RBP4.3□□□□□ -1.72
ROD1YOR018W YEL076CP39971 216 aa4.3□□□□□ -1.72
ROD1YOR018W RPA14P50106 137 aa4.3□□□□□ -1.72
ROD1YOR018W BNI5P53890 448 aaKnown RBP4.3□□□□□ -1.72
ROD1YOR018W HIS4P00815 799 aaKnown RBP4.3□□□□□ -1.72
ROD1YOR018W GAL2P13181 574 aa4.3□□□□□ -1.72
ROD1YOR018W THR4P16120 514 aaKnown RBP4.3□□□□□ -1.72
ROD1YOR018W GSY2P27472 705 aa4.3□□□□□ -1.72
ROD1YOR018W OCT1P35999 772 aa4.3□□□□□ -1.72
ROD1YOR018W PIH1P38768 344 aa4.3□□□□□ -1.72
ROD1YOR018W GAA1P39012 614 aa4.3□□□□□ -1.72
ROD1YOR018W RSM25P40496 264 aa4.3□□□□□ -1.72
ROD1YOR018W YPT11P48559 417 aa4.3□□□□□ -1.72
ROD1YOR018W RET3P53600 189 aa4.3□□□□□ -1.72
ROD1YOR018W BNI4P53858 892 aa4.3□□□□□ -1.72
ROD1YOR018W DUS4Q06063 367 aa4.3□□□□□ -1.72
ROD1YOR018W YDL057WQ07379 328 aa4.3□□□□□ -1.72
ROD1YOR018W PDC1P06169 563 aaKnown RBP4.29□□□□□ -1.72
ROD1YOR018W ALG1P16661 449 aa4.29□□□□□ -1.72
ROD1YOR018W PSO2P30620 661 aa4.29□□□□□ -1.72
ROD1YOR018W ASH1P34233 588 aa4.29□□□□□ -1.72
ROD1YOR018W CCT3P39077 534 aaKnown RBP4.29□□□□□ -1.72
ROD1YOR018W UBA2P52488 636 aa4.29□□□□□ -1.72
ROD1YOR018W CUE3P53137 624 aaKnown RBP4.29□□□□□ -1.72
ROD1YOR018W PGA2P53903 129 aa4.29□□□□□ -1.72
ROD1YOR018W WAR1Q03631 944 aa4.29□□□□□ -1.72
ROD1YOR018W BUL2Q03758 920 aaKnown RBP4.29□□□□□ -1.72
ROD1YOR018W SES1P07284 462 aaKnown RBP4.29□□□□□ -1.72
ROD1YOR018W ISY1P21374 235 aaPredicted RBP4.29□□□□□ -1.72
ROD1YOR018W GSY1P23337 708 aa4.29□□□□□ -1.72
ROD1YOR018W UGA4P32837 571 aa4.29□□□□□ -1.72
ROD1YOR018W SHM1P37292 490 aaPredicted RBP4.29□□□□□ -1.72
ROD1YOR018W ETP1P38748 585 aaKnown RBP4.29□□□□□ -1.72
ROD1YOR018W ERC1P38767 581 aa4.29□□□□□ -1.72
ROD1YOR018W LSB1P53281 241 aa4.29□□□□□ -1.72
ROD1YOR018W NBL1Q3E7Y6 73 aa4.29□□□□□ -1.72
ROD1YOR018W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.28□□□□□ -1.72not detected
ROD1YOR018W MOD5P07884 428 aa4.28□□□□□ -1.72
ROD1YOR018W HVG1P0CE11 249 aa4.28□□□□□ -1.72
ROD1YOR018W PGM2P37012 569 aaKnown RBP4.28□□□□□ -1.72
ROD1YOR018W RTT107P38850 1070 aa4.28□□□□□ -1.72
ROD1YOR018W YGR237CP50089 785 aa4.28□□□□□ -1.72
ROD1YOR018W GUP1P53154 560 aa4.28□□□□□ -1.72
ROD1YOR018W CBK1P53894 756 aa4.28□□□□□ -1.72
ROD1YOR018W RPL34AP87262 121 aaPredicted RBP4.28□□□□□ -1.72
ROD1YOR018W LCD1Q04377 747 aa4.28□□□□□ -1.72
ROD1YOR018W YMR321CQ04898 105 aa4.28□□□□□ -1.72
ROD1YOR018W YLH47Q06493 454 aa4.28□□□□□ -1.72
ROD1YOR018W BMT6Q12291 365 aa4.28□□□□□ -1.72
ROD1YOR018W AIR2Q12476 344 aaKnown RBP4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms