RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C AOS1Q06624 347 aa3.07□□□□□ -1.92
DNL4YOR005C YLR419WQ06698 1435 aaKnown RBP3.07□□□□□ -1.92
DNL4YOR005C DRS2P39524 1355 aa3.07□□□□□ -1.92
DNL4YOR005C VPS15P22219 1454 aa3.07□□□□□ -1.92
DNL4YOR005C SCP160P06105 1222 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
DNL4YOR005C RAD53P22216 821 aa3.06□□□□□ -1.92
DNL4YOR005C MFT1P33441 392 aaKnown RBP3.06□□□□□ -1.92
DNL4YOR005C YEL1P34225 687 aa3.06□□□□□ -1.92
DNL4YOR005C YKL077WP36081 392 aa3.06□□□□□ -1.92
DNL4YOR005C AIM21P40563 679 aa3.06□□□□□ -1.92
DNL4YOR005C GUS1P46655 708 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
DNL4YOR005C MET13P53128 600 aa3.06□□□□□ -1.92
DNL4YOR005C SPC105P53148 917 aa3.06□□□□□ -1.92
DNL4YOR005C MET14Q02196 202 aa3.06□□□□□ -1.92
DNL4YOR005C TY1B-DR3Q99231 1755 aa3.06□□□□□ -1.92
DNL4YOR005C CDC9P04819 755 aa3.06□□□□□ -1.92
DNL4YOR005C TY1A-LR4P0C2I8 440 aaKnown RBP3.06□□□□□ -1.92
DNL4YOR005C TY1A-DR6P0CX70 440 aa3.06□□□□□ -1.92
DNL4YOR005C TY1A-ER1P0CX71 440 aa3.06□□□□□ -1.92
DNL4YOR005C TY1A-LR2P0CX72 440 aa3.06□□□□□ -1.92
DNL4YOR005C TY1A-PLP0CX73 440 aa3.06□□□□□ -1.92
DNL4YOR005C TY1A-JR1P0CX74 440 aa3.06□□□□□ -1.92
DNL4YOR005C TY1A-LR3P0CX75 440 aa3.06□□□□□ -1.92
DNL4YOR005C TY1A-ML2P0CX76 440 aa3.06□□□□□ -1.92
DNL4YOR005C MSD1P15179 658 aaKnown RBP3.06□□□□□ -1.92
DNL4YOR005C RPN12P32496 274 aa3.06□□□□□ -1.92
DNL4YOR005C SCT1P32784 759 aa3.06□□□□□ -1.92
DNL4YOR005C PET10P36139 283 aa3.06□□□□□ -1.92
DNL4YOR005C YBR284WP38150 797 aa3.06□□□□□ -1.92
DNL4YOR005C SIT1P39980 628 aa3.06□□□□□ -1.92
DNL4YOR005C PPT1P53043 513 aa3.06□□□□□ -1.92
DNL4YOR005C LCB5Q06147 687 aaKnown RBP3.06□□□□□ -1.92
DNL4YOR005C MET32Q12041 191 aa3.06□□□□□ -1.92
DNL4YOR005C TY1A-GR1Q12085 440 aa3.06□□□□□ -1.92
DNL4YOR005C TY1A-PR3Q6Q5H1 440 aaKnown RBP3.06□□□□□ -1.92
DNL4YOR005C TY1A-OLQ92392 440 aaKnown RBP3.06□□□□□ -1.92
DNL4YOR005C MHP1P43638 1398 aa3.06□□□□□ -1.92
DNL4YOR005C CAT8P39113 1433 aa3.06□□□□□ -1.92
DNL4YOR005C TY3B-GQ99315 1547 aa3.06□□□□□ -1.92
DNL4YOR005C GAL1P04385 528 aa3.06□□□□□ -1.92
DNL4YOR005C DED1P06634 604 aaKnown RBP3.06□□□□□ -1.92
DNL4YOR005C ARG82P07250 355 aa3.06□□□□□ -1.92
DNL4YOR005C HTS1P07263 546 aaKnown RBP3.06□□□□□ -1.92
DNL4YOR005C SRD1P09007 221 aa3.06□□□□□ -1.92
DNL4YOR005C PCL2P25693 308 aa3.06□□□□□ -1.92
DNL4YOR005C TFC4P33339 1025 aa3.06□□□□□ -1.92
DNL4YOR005C HSP78P33416 811 aa3.06□□□□□ -1.92
DNL4YOR005C YKL222CP35995 705 aa3.06□□□□□ -1.92
DNL4YOR005C ADD66P36040 267 aa3.06□□□□□ -1.92
DNL4YOR005C NEM1P38757 446 aa3.06□□□□□ -1.92
DNL4YOR005C VID27P40157 782 aa3.06□□□□□ -1.92
DNL4YOR005C DUG1P43616 481 aaKnown RBP3.06□□□□□ -1.92
DNL4YOR005C GCR2Q01722 534 aa3.06□□□□□ -1.92
DNL4YOR005C UTP5Q04177 643 aaKnown RBP3.06□□□□□ -1.92
DNL4YOR005C RRP6Q12149 733 aaKnown RBP3.06□□□□□ -1.92
DNL4YOR005C TY2B-LR1P0C2J3 1770 aa3.05□□□□□ -1.92
DNL4YOR005C TY2B-FP0CX63 1770 aa3.05□□□□□ -1.92
DNL4YOR005C TY2B-GR2P0CX64 1770 aa3.05□□□□□ -1.92
DNL4YOR005C TY2B-CP25384 1770 aa3.05□□□□□ -1.92
DNL4YOR005C TY2B-DR2Q03494 1770 aa3.05□□□□□ -1.92
DNL4YOR005C TY1B-DR1Q03855 1755 aa3.05□□□□□ -1.92
DNL4YOR005C TY2B-DR3Q07791 1770 aaKnown RBP3.05□□□□□ -1.92
DNL4YOR005C TY2B-OR1Q12113 1770 aa3.05□□□□□ -1.92
DNL4YOR005C TY2B-DR1Q12472 1770 aa3.05□□□□□ -1.92
DNL4YOR005C TY2B-OR2Q12501 1770 aa3.05□□□□□ -1.92
DNL4YOR005C PDR5P33302 1511 aaKnown RBP3.05□□□□□ -1.92
DNL4YOR005C IDI1P15496 288 aa3.05□□□□□ -1.92
DNL4YOR005C AFG2P32794 780 aa3.05□□□□□ -1.92
DNL4YOR005C RRP8P38961 392 aaKnown RBP3.05□□□□□ -1.92
DNL4YOR005C ALG2P43636 503 aa3.05□□□□□ -1.92
DNL4YOR005C HNT2P49775 206 aa3.05□□□□□ -1.92
DNL4YOR005C BIO5P53744 561 aaKnown RBP3.05□□□□□ -1.92
DNL4YOR005C SPO71Q03868 1245 aa3.05□□□□□ -1.92
DNL4YOR005C RSC2Q06488 889 aa3.05□□□□□ -1.92
DNL4YOR005C CHC1P22137 1653 aaKnown RBP3.05□□□□□ -1.92
DNL4YOR005C PTP2P29461 750 aa3.05□□□□□ -1.92
DNL4YOR005C TFA2P36145 328 aa3.05□□□□□ -1.92
DNL4YOR005C MCM7P38132 845 aa3.05□□□□□ -1.92
DNL4YOR005C INP51P40559 946 aaKnown RBP3.05□□□□□ -1.92
DNL4YOR005C YJR124CP47159 448 aa3.05□□□□□ -1.92
DNL4YOR005C PBP1P53297 722 aaKnown RBP3.05□□□□□ -1.92
DNL4YOR005C ESF2P53743 316 aaKnown RBP3.05□□□□□ -1.92
DNL4YOR005C RKM2Q03942 479 aa3.05□□□□□ -1.92
DNL4YOR005C SNT2P53127 1403 aa3.04□□□□□ -1.92
DNL4YOR005C GCN2P15442 1659 aa3.04□□□□□ -1.92
DNL4YOR005C NCL1P38205 684 aaKnown RBP3.04□□□□□ -1.92
DNL4YOR005C SLS1P42900 643 aa3.04□□□□□ -1.92
DNL4YOR005C NIT2P47016 307 aa3.04□□□□□ -1.92
DNL4YOR005C YJR096WP47137 282 aa3.04□□□□□ -1.92
DNL4YOR005C CLA4P48562 842 aa3.04□□□□□ -1.92
DNL4YOR005C MSB3P48566 633 aaPredicted RBP3.04□□□□□ -1.92
DNL4YOR005C BUL2Q03758 920 aaKnown RBP3.04□□□□□ -1.92
DNL4YOR005C ENT2Q05785 613 aa3.04□□□□□ -1.92
DNL4YOR005C YDR306CQ06640 478 aa3.04□□□□□ -1.92
DNL4YOR005C YPR071WQ12346 211 aa3.04□□□□□ -1.92
DNL4YOR005C TY2B-BQ12491 1770 aa3.04□□□□□ -1.92
DNL4YOR005C SFL1P20134 766 aa3.04□□□□□ -1.92
DNL4YOR005C SPC29P33419 253 aa3.04□□□□□ -1.92
DNL4YOR005C RGD1P38339 666 aa3.04□□□□□ -1.92
DNL4YOR005C SAH1P39954 449 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms