RNA–Protein interactions for RNA: YOL116W

MSN1, Transcript of Transcriptional activator, yeast

Gene MSN1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSN1	YOL116W	FAA4	P47912	694 aa	Known RBP	4.64	□□□□□ -1.67
MSN1	YOL116W	NOP7	P53261	605 aa	Known RBP	4.64	□□□□□ -1.67
MSN1	YOL116W	SVS1	Q12254	260 aa		4.64	□□□□□ -1.67
MSN1	YOL116W	RPL11B	Q3E757	174 aa	Predicted RBP	4.64	□□□□□ -1.67
MSN1	YOL116W	YPK9	Q12697	1472 aa		4.63	□□□□□ -1.67
MSN1	YOL116W	TY2B-LR1	P0C2J3	1770 aa		4.63	□□□□□ -1.67
MSN1	YOL116W	TY2B-F	P0CX63	1770 aa		4.63	□□□□□ -1.67
MSN1	YOL116W	TY2B-GR2	P0CX64	1770 aa		4.63	□□□□□ -1.67
MSN1	YOL116W	TY2B-C	P25384	1770 aa		4.63	□□□□□ -1.67
MSN1	YOL116W	TY2B-DR2	Q03494	1770 aa		4.63	□□□□□ -1.67
MSN1	YOL116W	TY1B-DR1	Q03855	1755 aa		4.63	□□□□□ -1.67
MSN1	YOL116W	TY2B-DR3	Q07791	1770 aa	Known RBP	4.63	□□□□□ -1.67
MSN1	YOL116W	TY2B-OR1	Q12113	1770 aa		4.63	□□□□□ -1.67
MSN1	YOL116W	TY2B-DR1	Q12472	1770 aa		4.63	□□□□□ -1.67
MSN1	YOL116W	TY2B-OR2	Q12501	1770 aa		4.63	□□□□□ -1.67
MSN1	YOL116W	MYO2	P19524	1574 aa	Known RBP	4.63	□□□□□ -1.67
MSN1	YOL116W	MOT2	P34909	587 aa	Known RBP	4.63	□□□□□ -1.67
MSN1	YOL116W	UGA2	P38067	497 aa		4.63	□□□□□ -1.67
MSN1	YOL116W	YGL176C	P46945	554 aa		4.63	□□□□□ -1.67
MSN1	YOL116W	YLR225C	Q05948	407 aa	Known RBP	4.63	□□□□□ -1.67
MSN1	YOL116W	FAL1	Q12099	399 aa	Known RBP	4.63	□□□□□ -1.67
MSN1	YOL116W	PAN1	P32521	1480 aa		4.62	□□□□□ -1.67
MSN1	YOL116W	PNT1	P38969	423 aa		4.62	□□□□□ -1.67
MSN1	YOL116W	MXR1	P40029	184 aa		4.62	□□□□□ -1.67
MSN1	YOL116W	ATG13	Q06628	738 aa		4.62	□□□□□ -1.67
MSN1	YOL116W	YDL177C	Q12257	170 aa		4.62	□□□□□ -1.67
MSN1	YOL116W	TY1B-BR	Q12193	1756 aa		4.62	□□□□□ -1.67
MSN1	YOL116W	TY1B-GR3	Q12316	1755 aa		4.62	□□□□□ -1.67
MSN1	YOL116W	TY1B-OR	Q92393	1755 aa		4.62	□□□□□ -1.67
MSN1	YOL116W	RPO31	P04051	1460 aa		4.62	□□□□□ -1.67
MSN1	YOL116W	AGP1	P25376	633 aa		4.61	□□□□□ -1.67
MSN1	YOL116W	TSA1	P34760	196 aa	Known RBP	4.61	□□□□□ -1.67
MSN1	YOL116W	PAM1	P37304	830 aa	Known RBP	4.61	□□□□□ -1.67
MSN1	YOL116W	RRT14	P40470	206 aa		4.61	□□□□□ -1.67
MSN1	YOL116W	SGD1	Q06132	899 aa		4.61	□□□□□ -1.67
MSN1	YOL116W	CDA2	Q06703	312 aa		4.61	□□□□□ -1.67
MSN1	YOL116W	LTE1	P07866	1435 aa		4.61	□□□□□ -1.67
MSN1	YOL116W	MET5	P47169	1442 aa		4.61	□□□□□ -1.67
MSN1	YOL116W	CYC1	P00044	109 aa	Predicted RBP	4.6	□□□□□ -1.67
MSN1	YOL116W	APL1	P27351	700 aa		4.6	□□□□□ -1.67
MSN1	YOL116W	SBA1	P28707	216 aa	Known RBP	4.6	□□□□□ -1.67
MSN1	YOL116W	SCT1	P32784	759 aa		4.6	□□□□□ -1.67
MSN1	YOL116W	VAC8	P39968	578 aa		4.6	□□□□□ -1.67
MSN1	YOL116W	YFL054C	P43549	646 aa		4.6	□□□□□ -1.67
MSN1	YOL116W	RIM8	P53179	542 aa		4.6	□□□□□ -1.67
MSN1	YOL116W	RKR1	Q04781	1562 aa		4.6	□□□□□ -1.67
MSN1	YOL116W	RPA190	P10964	1664 aa	Known RBP	4.6	□□□□□ -1.67
MSN1	YOL116W	SOD2	P00447	233 aa		4.59	□□□□□ -1.67
MSN1	YOL116W	PRP6	P19735	899 aa	Predicted RBP	4.59	□□□□□ -1.67
MSN1	YOL116W	ACE2	P21192	770 aa		4.59	□□□□□ -1.67
MSN1	YOL116W	DBP2	P24783	546 aa	Known RBP	4.59	□□□□□ -1.67
MSN1	YOL116W	SLA2	P33338	968 aa		4.59	□□□□□ -1.67
MSN1	YOL116W	AIM3	P38266	947 aa	Known RBP	4.59	□□□□□ -1.67
MSN1	YOL116W	LAM1	P38851	1228 aa		4.59	□□□□□ -1.67
MSN1	YOL116W	PBP1	P53297	722 aa	Known RBP	4.59	□□□□□ -1.67
MSN1	YOL116W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.59	□□□□□ -1.67	not detected
MSN1	YOL116W	TRM732	Q03496	1420 aa		4.59	□□□□□ -1.67
MSN1	YOL116W	MMS1	Q06211	1407 aa		4.59	□□□□□ -1.67
MSN1	YOL116W	OPI10	Q08202	246 aa		4.59	□□□□□ -1.67
MSN1	YOL116W	MMS22	Q06164	1454 aa		4.58	□□□□□ -1.68
MSN1	YOL116W	RPS13	P05756	151 aa	Known RBP	4.58	□□□□□ -1.68
MSN1	YOL116W	ABD1	P32783	436 aa	Predicted RBP	4.58	□□□□□ -1.68
MSN1	YOL116W	ALD6	P54115	500 aa	Known RBP	4.58	□□□□□ -1.68
MSN1	YOL116W	SRP1	Q02821	542 aa	Known RBP	4.58	□□□□□ -1.68
MSN1	YOL116W	SHE9	Q04172	456 aa		4.58	□□□□□ -1.68
MSN1	YOL116W	YPL066W	Q12194	479 aa		4.58	□□□□□ -1.68
MSN1	YOL116W	BNI1	P41832	1953 aa		4.58	□□□□□ -1.68
MSN1	YOL116W	GEA2	P39993	1459 aa	Known RBP	4.57	□□□□□ -1.68
MSN1	YOL116W	BI4	P03879	638 aa		4.57	□□□□□ -1.68
MSN1	YOL116W	CMP2	P14747	604 aa		4.57	□□□□□ -1.68
MSN1	YOL116W	ABZ1	P37254	787 aa	Predicted RBP	4.57	□□□□□ -1.68
MSN1	YOL116W	YPL277C	Q08989	487 aa		4.57	□□□□□ -1.68
MSN1	YOL116W	WRS1	Q12109	432 aa	Known RBP	4.57	□□□□□ -1.68
MSN1	YOL116W	YLL058W	Q12198	575 aa		4.57	□□□□□ -1.68
MSN1	YOL116W	OSW2	Q12202	724 aa		4.57	□□□□□ -1.68
MSN1	YOL116W	TY2B-B	Q12491	1770 aa		4.57	□□□□□ -1.68
MSN1	YOL116W	TOP2	P06786	1428 aa	Known RBP	4.56	□□□□□ -1.68
MSN1	YOL116W	MRP8	P35719	219 aa		4.56	□□□□□ -1.68
MSN1	YOL116W	MEF2	P39677	819 aa		4.56	□□□□□ -1.68
MSN1	YOL116W	SIP5	P40210	489 aa	Known RBP	4.56	□□□□□ -1.68
MSN1	YOL116W	YLR358C	O13565	187 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	PRI2	P20457	528 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	VBA5	P36172	582 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	SAH1	P39954	449 aa	Known RBP	4.55	□□□□□ -1.68
MSN1	YOL116W	MSC2	Q03455	724 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	ROT1	Q03691	256 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	SIZ1	Q04195	904 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	ESC2	Q06340	456 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	RXT3	Q07458	294 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
MSN1	YOL116W	TY1B-H	O13535	1793 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	TY1B-DR5	P0C2I2	1755 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	TY1B-DR6	P0C2I3	1755 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	TY1B-LR2	P0C2I5	1755 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	4.55	□□□□□ -1.68
MSN1	YOL116W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	4.55	□□□□□ -1.68
MSN1	YOL116W	TY1B-PR2	P0C2J0	1756 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	4.55	□□□□□ -1.68
MSN1	YOL116W	TY1B-JR1	P47098	1755 aa		4.55	□□□□□ -1.68
MSN1	YOL116W	TY1B-ML2	Q03434	1755 aa	Known RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 49 ms