RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W YOL087CQ99247 1116 aa8.24□□□□□ -1.09
HDA1YNL021W INO1P11986 533 aa8.23□□□□□ -1.09
HDA1YNL021W HSC82P15108 705 aaKnown RBP8.23□□□□□ -1.09
HDA1YNL021W SEC61P32915 480 aa8.23□□□□□ -1.09
HDA1YNL021W SHM1P37292 490 aaPredicted RBP8.23□□□□□ -1.09
HDA1YNL021W TRE2Q08693 809 aa8.23□□□□□ -1.09
HDA1YNL021W MSH3P25336 1018 aa8.23□□□□□ -1.09
HDA1YNL021W YAP1801P38856 637 aa8.23□□□□□ -1.09
HDA1YNL021W AIM46P38885 310 aa8.23□□□□□ -1.09
HDA1YNL021W RSC8P43609 557 aaKnown RBP8.23□□□□□ -1.09
HDA1YNL021W RPS0BP46654 252 aaKnown RBP8.23□□□□□ -1.09
HDA1YNL021W TAF13P11747 167 aa8.22□□□□□ -1.09
HDA1YNL021W PRP9P19736 530 aaKnown RBP8.22□□□□□ -1.09
HDA1YNL021W KAP122P32767 1081 aa8.22□□□□□ -1.09
HDA1YNL021W ESL2P36168 1195 aa8.22□□□□□ -1.09
HDA1YNL021W PAN5P38787 379 aa8.22□□□□□ -1.09
HDA1YNL021W MET13P53128 600 aa8.22□□□□□ -1.09
HDA1YNL021W RRP6Q12149 733 aaKnown RBP8.22□□□□□ -1.09
HDA1YNL021W PRP5P21372 849 aaPredicted RBP8.21□□□□□ -1.09
HDA1YNL021W MRT4P33201 236 aaKnown RBP8.21□□□□□ -1.09
HDA1YNL021W SQT1P35184 431 aa8.21□□□□□ -1.09
HDA1YNL021W DSS1P39112 969 aa8.21□□□□□ -1.09
HDA1YNL021W PEX13P80667 386 aa8.21□□□□□ -1.09
HDA1YNL021W PCL2P25693 308 aa8.21□□□□□ -1.1
HDA1YNL021W RTG1P32607 177 aa8.21□□□□□ -1.1
HDA1YNL021W HFD1Q04458 532 aa8.21□□□□□ -1.1
HDA1YNL021W PMT7Q06644 662 aa8.21□□□□□ -1.1
HDA1YNL021W YDL129WQ07555 291 aa8.21□□□□□ -1.1
HDA1YNL021W TY3B-IQ7LHG5 1498 aaKnown RBP8.2□□□□□ -1.1
HDA1YNL021W FOB1O13329 566 aa8.2□□□□□ -1.1
HDA1YNL021W TAF5P38129 798 aa8.2□□□□□ -1.1
HDA1YNL021W YML131WQ03102 365 aa8.2□□□□□ -1.1
HDA1YNL021W PTP2P29461 750 aa8.2□□□□□ -1.1
HDA1YNL021W SSH4P32343 579 aa8.2□□□□□ -1.1
HDA1YNL021W YHL041WP38730 149 aa8.2□□□□□ -1.1
HDA1YNL021W SSN3P39073 555 aa8.2□□□□□ -1.1
HDA1YNL021W CDC9P04819 755 aa8.19□□□□□ -1.1
HDA1YNL021W YBR284WP38150 797 aa8.19□□□□□ -1.1
HDA1YNL021W YIL165CP40446 119 aa8.19□□□□□ -1.1
HDA1YNL021W UBP6P43593 499 aaKnown RBP8.19□□□□□ -1.1
HDA1YNL021W BNA1P47096 177 aa8.19□□□□□ -1.1
HDA1YNL021W SYH1Q02875 849 aaKnown RBP8.19□□□□□ -1.1
HDA1YNL021W RTP1Q12751 981 aa8.19□□□□□ -1.1
HDA1YNL021W HAP1P0CE41 1502 aa8.19□□□□□ -1.1
HDA1YNL021W DBF20P32328 564 aa8.18□□□□□ -1.1
HDA1YNL021W MRS6P32864 603 aaKnown RBP8.18□□□□□ -1.1
HDA1YNL021W KTR4P38131 464 aa8.18□□□□□ -1.1
HDA1YNL021W YGL176CP46945 554 aa8.18□□□□□ -1.1
HDA1YNL021W SRD1P09007 221 aa8.18□□□□□ -1.1
HDA1YNL021W NIC96P34077 839 aa8.18□□□□□ -1.1
HDA1YNL021W NIT2P47016 307 aa8.18□□□□□ -1.1
HDA1YNL021W ENT3P47160 408 aa8.18□□□□□ -1.1
HDA1YNL021W PBP1P53297 722 aaKnown RBP8.18□□□□□ -1.1
HDA1YNL021W NUP192P47054 1683 aa8.18□□□□□ -1.1
HDA1YNL021W SIP5P40210 489 aaKnown RBP8.17□□□□□ -1.1
HDA1YNL021W YJR096WP47137 282 aa8.17□□□□□ -1.1
HDA1YNL021W SEC3P33332 1336 aaKnown RBP8.17□□□□□ -1.1
HDA1YNL021W TOM70P07213 617 aaKnown RBP8.17□□□□□ -1.1
HDA1YNL021W MSD1P15179 658 aaKnown RBP8.17□□□□□ -1.1
HDA1YNL021W DAL3P32459 195 aa8.17□□□□□ -1.1
HDA1YNL021W SCT1P32784 759 aa8.17□□□□□ -1.1
HDA1YNL021W PIN4P34217 668 aaKnown RBP RIP-Chip data8.17□□□□□ -1.1not detected
HDA1YNL021W GPP2P40106 250 aaKnown RBP8.17□□□□□ -1.1
HDA1YNL021W NDE1P40215 560 aa8.16□□□□□ -1.1
HDA1YNL021W RKM4Q12504 494 aa8.16□□□□□ -1.1
HDA1YNL021W MHP1P43638 1398 aa8.16□□□□□ -1.1
HDA1YNL021W ECM2P38241 364 aaKnown RBP8.15□□□□□ -1.1
HDA1YNL021W JJJ2P46997 583 aa8.15□□□□□ -1.1
HDA1YNL021W RAT1Q02792 1006 aaKnown RBP8.15□□□□□ -1.1
HDA1YNL021W RAD53P22216 821 aa8.15□□□□□ -1.11
HDA1YNL021W EXO5P38289 585 aa8.15□□□□□ -1.11
HDA1YNL021W HSE1P38753 452 aa8.15□□□□□ -1.11
HDA1YNL021W ALA1P40825 983 aaKnown RBP8.15□□□□□ -1.11
HDA1YNL021W DUG1P43616 481 aaKnown RBP8.15□□□□□ -1.11
HDA1YNL021W SNP1Q00916 300 aaPredicted RBP8.15□□□□□ -1.11
HDA1YNL021W LCB5Q06147 687 aaKnown RBP8.15□□□□□ -1.11
HDA1YNL021W SSP2Q08646 371 aa8.15□□□□□ -1.11
HDA1YNL021W KCC4P25389 1037 aa8.14□□□□□ -1.11
HDA1YNL021W UBA2P52488 636 aa8.14□□□□□ -1.11
HDA1YNL021W MLC2Q06580 163 aa8.14□□□□□ -1.11
HDA1YNL021W AOS1Q06624 347 aa8.14□□□□□ -1.11
HDA1YNL021W LDB19Q12502 818 aa8.14□□□□□ -1.11
HDA1YNL021W DNF3Q12674 1656 aa8.14□□□□□ -1.11
HDA1YNL021W DAL5P15365 543 aa8.14□□□□□ -1.11
HDA1YNL021W SFL1P20134 766 aa8.14□□□□□ -1.11
HDA1YNL021W YKL107WP34251 309 aa8.14□□□□□ -1.11
HDA1YNL021W BLI1P35727 113 aa8.14□□□□□ -1.11
HDA1YNL021W OAF1P39720 1047 aaPredicted RBP8.14□□□□□ -1.11
HDA1YNL021W REH1Q06709 432 aa8.14□□□□□ -1.11
HDA1YNL021W MRF1P30775 413 aaPredicted RBP8.13□□□□□ -1.11
HDA1YNL021W RPS0AP32905 252 aaKnown RBP8.13□□□□□ -1.11
HDA1YNL021W RKM3P38222 552 aa8.13□□□□□ -1.11
HDA1YNL021W FAF1P40546 346 aaPredicted RBP8.13□□□□□ -1.11
HDA1YNL021W PSR2Q07949 397 aa8.13□□□□□ -1.11
HDA1YNL021W TY1A-DR3Q12441 440 aa8.13□□□□□ -1.11
HDA1YNL021W RPP2BP02400 110 aaKnown RBP8.12□□□□□ -1.11
HDA1YNL021W MSS18P08593 268 aa8.12□□□□□ -1.11
HDA1YNL021W MCM10P32354 571 aa8.12□□□□□ -1.11
HDA1YNL021W PET10P36139 283 aa8.12□□□□□ -1.11
HDA1YNL021W NPY1P53164 384 aa8.12□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms