RNA–Protein interactions for RNA: YMR288W

HSH155, Transcript of U2-snRNP associated splicing factor, yeastyeast

Gene HSH155, Length 2,916 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSH155YMR288W CUP1-1P0CX80 61 aa2.54□□□□□ -2
HSH155YMR288W CUP1-2P0CX81 61 aa2.54□□□□□ -2
HSH155YMR288W VMA4P22203 233 aaKnown RBP2.54□□□□□ -2
HSH155YMR288W DUR3P33413 735 aa2.54□□□□□ -2
HSH155YMR288W MNR2P35724 969 aa2.54□□□□□ -2
HSH155YMR288W YAR028WP39548 234 aa2.54□□□□□ -2
HSH155YMR288W EST2Q06163 884 aa2.54□□□□□ -2
HSH155YMR288W RRP15Q06511 250 aaPredicted RBP2.54□□□□□ -2
HSH155YMR288W ALG6Q12001 544 aaKnown RBP2.54□□□□□ -2
HSH155YMR288W AKR1P39010 764 aa2.54□□□□□ -2
HSH155YMR288W ELA1P53861 379 aaPredicted RBP2.54□□□□□ -2
HSH155YMR288W GIC2Q06648 383 aa2.54□□□□□ -2
HSH155YMR288W TMA46Q12000 345 aaKnown RBP2.54□□□□□ -2
HSH155YMR288W FBP1P09201 348 aa2.53□□□□□ -2
HSH155YMR288W ERS1P17261 260 aa2.53□□□□□ -2
HSH155YMR288W UGA4P32837 571 aa2.53□□□□□ -2
HSH155YMR288W SNF7P39929 240 aaKnown RBP2.53□□□□□ -2
HSH155YMR288W PRP43P53131 767 aaKnown RBP2.53□□□□□ -2
HSH155YMR288W RCM1P53972 490 aa2.53□□□□□ -2
HSH155YMR288W NOG1Q02892 647 aaKnown RBP2.53□□□□□ -2
HSH155YMR288W RTT10Q08924 1013 aa2.53□□□□□ -2
HSH155YMR288W TY1A-NL1Q12391 440 aaKnown RBP2.53□□□□□ -2
HSH155YMR288W HVG1P0CE11 249 aa2.53□□□□□ -2
HSH155YMR288W CHS2P14180 963 aa2.53□□□□□ -2
HSH155YMR288W SEC23P15303 768 aaKnown RBP2.53□□□□□ -2
HSH155YMR288W ICL1P28240 557 aaPredicted RBP2.53□□□□□ -2
HSH155YMR288W ADD66P36040 267 aa2.53□□□□□ -2
HSH155YMR288W SLS1P42900 643 aa2.53□□□□□ -2
HSH155YMR288W NCS6P53088 359 aa2.53□□□□□ -2
HSH155YMR288W HRK1Q08732 759 aaKnown RBP2.53□□□□□ -2
HSH155YMR288W BUG1Q12191 341 aa2.53□□□□□ -2
HSH155YMR288W PMD1P32634 1753 aa2.53□□□□□ -2
HSH155YMR288W NFS1P25374 497 aa2.52□□□□□ -2.01
HSH155YMR288W SCT1P32784 759 aa2.52□□□□□ -2.01
HSH155YMR288W YKL222CP35995 705 aa2.52□□□□□ -2.01
HSH155YMR288W NNK1P36003 928 aa2.52□□□□□ -2.01
HSH155YMR288W GPT2P36148 743 aa2.52□□□□□ -2.01
HSH155YMR288W EXO5P38289 585 aa2.52□□□□□ -2.01
HSH155YMR288W ENP1P38333 483 aaKnown RBP2.52□□□□□ -2.01
HSH155YMR288W YGL140CP53120 1219 aa2.52□□□□□ -2.01
HSH155YMR288W SPO20Q04359 397 aa2.52□□□□□ -2.01
HSH155YMR288W SIR4P11978 1358 aa2.52□□□□□ -2.01
HSH155YMR288W ERT1P38140 529 aa2.52□□□□□ -2.01
HSH155YMR288W VPS53P47061 822 aa2.52□□□□□ -2.01
HSH155YMR288W YGR130CP53278 816 aa2.52□□□□□ -2.01
HSH155YMR288W AOS1Q06624 347 aa2.52□□□□□ -2.01
HSH155YMR288W REC8Q12188 680 aa2.52□□□□□ -2.01
HSH155YMR288W GCN1P33892 2672 aaKnown RBP2.52□□□□□ -2.01
HSH155YMR288W FIG2P25653 1609 aa2.52□□□□□ -2.01
HSH155YMR288W NEM1P38757 446 aa2.52□□□□□ -2.01
HSH155YMR288W SPO74P45819 413 aa2.52□□□□□ -2.01
HSH155YMR288W ENT3P47160 408 aa2.52□□□□□ -2.01
HSH155YMR288W YGR045CP53229 120 aa2.52□□□□□ -2.01
HSH155YMR288W RKM2Q03942 479 aa2.52□□□□□ -2.01
HSH155YMR288W UTP5Q04177 643 aaKnown RBP2.52□□□□□ -2.01
HSH155YMR288W CTI6Q08923 506 aa2.52□□□□□ -2.01
HSH155YMR288W UTP10P42945 1769 aaKnown RBP2.51□□□□□ -2.01
HSH155YMR288W IKI3Q06706 1349 aaKnown RBP2.51□□□□□ -2.01
HSH155YMR288W TY1A-LR4P0C2I8 440 aaKnown RBP2.51□□□□□ -2.01
HSH155YMR288W TY1A-DR6P0CX70 440 aa2.51□□□□□ -2.01
HSH155YMR288W TY1A-ER1P0CX71 440 aa2.51□□□□□ -2.01
HSH155YMR288W TY1A-LR2P0CX72 440 aa2.51□□□□□ -2.01
HSH155YMR288W TY1A-PLP0CX73 440 aa2.51□□□□□ -2.01
HSH155YMR288W TY1A-JR1P0CX74 440 aa2.51□□□□□ -2.01
HSH155YMR288W TY1A-LR3P0CX75 440 aa2.51□□□□□ -2.01
HSH155YMR288W TY1A-ML2P0CX76 440 aa2.51□□□□□ -2.01
HSH155YMR288W YKR073CP36153 106 aa2.51□□□□□ -2.01
HSH155YMR288W MMM1P41800 426 aa2.51□□□□□ -2.01
HSH155YMR288W YOR059CQ08448 450 aaKnown RBP2.51□□□□□ -2.01
HSH155YMR288W TY1A-GR1Q12085 440 aa2.51□□□□□ -2.01
HSH155YMR288W WRS1Q12109 432 aaKnown RBP2.51□□□□□ -2.01
HSH155YMR288W NYV1Q12255 253 aa2.51□□□□□ -2.01
HSH155YMR288W YLR122CQ12312 125 aa2.51□□□□□ -2.01
HSH155YMR288W TY1A-PR3Q6Q5H1 440 aaKnown RBP2.51□□□□□ -2.01
HSH155YMR288W TY1A-OLQ92392 440 aaKnown RBP2.51□□□□□ -2.01
HSH155YMR288W TRP3P00937 484 aa2.51□□□□□ -2.01
HSH155YMR288W RPS4AP0CX35 261 aaKnown RBP2.51□□□□□ -2.01
HSH155YMR288W RPS4BP0CX36 261 aaKnown RBP2.51□□□□□ -2.01
HSH155YMR288W SMY1P32364 656 aaKnown RBP2.51□□□□□ -2.01
HSH155YMR288W SMY2P32909 740 aaKnown RBP2.51□□□□□ -2.01
HSH155YMR288W MCM7P38132 845 aa2.51□□□□□ -2.01
HSH155YMR288W SAF1P38352 637 aa2.51□□□□□ -2.01
HSH155YMR288W PIC2P40035 300 aa2.51□□□□□ -2.01
HSH155YMR288W NCE103P53615 221 aa2.51□□□□□ -2.01
HSH155YMR288W TOS4Q06266 489 aa2.51□□□□□ -2.01
HSH155YMR288W PTC5Q12511 572 aa2.51□□□□□ -2.01
HSH155YMR288W MSB1P21339 1137 aaKnown RBP2.5□□□□□ -2.01
HSH155YMR288W PPH3P32345 308 aa2.5□□□□□ -2.01
HSH155YMR288W CIT3P43635 486 aa2.5□□□□□ -2.01
HSH155YMR288W FOL2P51601 243 aaKnown RBP2.5□□□□□ -2.01
HSH155YMR288W SIW14P53965 281 aa2.5□□□□□ -2.01
HSH155YMR288W GDE1Q02979 1223 aa2.5□□□□□ -2.01
HSH155YMR288W TPP1Q03796 238 aa2.5□□□□□ -2.01
HSH155YMR288W YLR257WQ06146 321 aaKnown RBP2.5□□□□□ -2.01
HSH155YMR288W ATG13Q06628 738 aa2.5□□□□□ -2.01
HSH155YMR288W FMP27Q06179 2628 aa2.5□□□□□ -2.01
HSH155YMR288W GCR1P07261 785 aa2.5□□□□□ -2.01
HSH155YMR288W CAF20P12962 161 aaKnown RBP2.5□□□□□ -2.01
HSH155YMR288W PUB1P32588 453 aaKnown RBP RIP-Chip data2.5□□□□□ -2.01not detected
HSH155YMR288W PGM1P33401 570 aaKnown RBP2.5□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 103 ms