RNA–Protein interactions for RNA: YMR272C

SCS7, Transcript of Sphingolipid alpha-hydroxylase, yeastyeast

Gene SCS7, Length 1,155 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCS7YMR272C EAF5P39995 279 aa7.08□□□□□ -1.28
SCS7YMR272C RPN3P40016 523 aaKnown RBP7.08□□□□□ -1.28
SCS7YMR272C OYE3P41816 400 aaPredicted RBP7.08□□□□□ -1.28
SCS7YMR272C PEX14P53112 341 aa7.08□□□□□ -1.28
SCS7YMR272C SDA1P53313 767 aaKnown RBP7.08□□□□□ -1.28
SCS7YMR272C MAG2Q06436 670 aaKnown RBP7.08□□□□□ -1.28
SCS7YMR272C YOR296WQ08748 1289 aa7.08□□□□□ -1.28
SCS7YMR272C FKS1P38631 1876 aaKnown RBP7.08□□□□□ -1.28
SCS7YMR272C HIP1P06775 603 aa7.07□□□□□ -1.28
SCS7YMR272C SRD1P09007 221 aa7.07□□□□□ -1.28
SCS7YMR272C RPL19AP0CX82 189 aaKnown RBP7.07□□□□□ -1.28
SCS7YMR272C RPL19BP0CX83 189 aaPredicted RBP7.07□□□□□ -1.28
SCS7YMR272C WHI2P12611 486 aa7.07□□□□□ -1.28
SCS7YMR272C TCP1P12612 559 aaKnown RBP7.07□□□□□ -1.28
SCS7YMR272C EFT1P32324 842 aaKnown RBP7.07□□□□□ -1.28
SCS7YMR272C SKG6P32900 734 aaPredicted RBP7.07□□□□□ -1.28
SCS7YMR272C EPL1P43572 832 aa7.07□□□□□ -1.28
SCS7YMR272C ACF4P47129 309 aa7.07□□□□□ -1.28
SCS7YMR272C SCS3P53012 380 aa7.07□□□□□ -1.28
SCS7YMR272C MET13P53128 600 aa7.07□□□□□ -1.28
SCS7YMR272C YGR273CP53329 174 aa7.07□□□□□ -1.28
SCS7YMR272C YNL115CP53925 644 aa7.07□□□□□ -1.28
SCS7YMR272C TRS120Q04183 1289 aa7.07□□□□□ -1.28
SCS7YMR272C AIM33Q04516 312 aa7.07□□□□□ -1.28
SCS7YMR272C RIF1P29539 1916 aa7.06□□□□□ -1.28
SCS7YMR272C YMR084WA2P2R3 262 aa7.06□□□□□ -1.28
SCS7YMR272C PGI1P12709 554 aaKnown RBP7.06□□□□□ -1.28
SCS7YMR272C KIN82P25341 720 aa7.06□□□□□ -1.28
SCS7YMR272C RPC53P25441 422 aa7.06□□□□□ -1.28
SCS7YMR272C CAB3P36076 571 aa7.06□□□□□ -1.28
SCS7YMR272C GPD2P41911 440 aaKnown RBP7.06□□□□□ -1.28
SCS7YMR272C ROG3P43602 733 aa7.06□□□□□ -1.28
SCS7YMR272C PIL1P53252 339 aaKnown RBP7.06□□□□□ -1.28
SCS7YMR272C YNR014WP53719 212 aa7.06□□□□□ -1.28
SCS7YMR272C ECM23Q02710 187 aa7.06□□□□□ -1.28
SCS7YMR272C CKA2P19454 339 aa7.05□□□□□ -1.28
SCS7YMR272C ESS1P22696 170 aa7.05□□□□□ -1.28
SCS7YMR272C DRE2P36152 348 aa7.05□□□□□ -1.28
SCS7YMR272C GAA1P39012 614 aa7.05□□□□□ -1.28
SCS7YMR272C SNF7P39929 240 aaKnown RBP7.05□□□□□ -1.28
SCS7YMR272C ESL1P40456 1118 aa7.05□□□□□ -1.28
SCS7YMR272C FIS1P40515 155 aa7.05□□□□□ -1.28
SCS7YMR272C GCV2P49095 1034 aa7.05□□□□□ -1.28
SCS7YMR272C SHE10P53075 577 aa7.05□□□□□ -1.28
SCS7YMR272C WHI4Q07655 649 aaKnown RBP7.05□□□□□ -1.28
SCS7YMR272C ELG1Q12050 791 aa7.05□□□□□ -1.28
SCS7YMR272C TFC8Q12308 588 aa7.05□□□□□ -1.28
SCS7YMR272C DBP5P20449 482 aaKnown RBP7.04□□□□□ -1.28
SCS7YMR272C STT3P39007 718 aaKnown RBP7.04□□□□□ -1.28
SCS7YMR272C INP51P40559 946 aaKnown RBP7.04□□□□□ -1.28
SCS7YMR272C CIT3P43635 486 aa7.04□□□□□ -1.28
SCS7YMR272C ISM1P48526 1002 aa7.04□□□□□ -1.28
SCS7YMR272C SEC5P89102 971 aa7.04□□□□□ -1.28
SCS7YMR272C YLR407WQ06070 228 aa7.04□□□□□ -1.28
SCS7YMR272C GET3Q12154 354 aaKnown RBP7.04□□□□□ -1.28
SCS7YMR272C MNL2Q12205 849 aa7.04□□□□□ -1.28
SCS7YMR272C PCD1Q12524 340 aa7.04□□□□□ -1.28
SCS7YMR272C TUF1P02992 437 aaKnown RBP7.03□□□□□ -1.28
SCS7YMR272C KGD2P19262 463 aaPredicted RBP7.03□□□□□ -1.28
SCS7YMR272C DPH2P32461 534 aa7.03□□□□□ -1.28
SCS7YMR272C UBP11P36026 717 aa7.03□□□□□ -1.28
SCS7YMR272C EBP2P36049 427 aaKnown RBP7.03□□□□□ -1.28
SCS7YMR272C UBP13P38187 747 aa7.03□□□□□ -1.28
SCS7YMR272C TVP23P38962 199 aa7.03□□□□□ -1.28
SCS7YMR272C LAM5P43560 674 aa7.03□□□□□ -1.28
SCS7YMR272C NCS2P53923 493 aaPredicted RBP7.03□□□□□ -1.28
SCS7YMR272C EIS1Q05050 843 aaKnown RBP7.03□□□□□ -1.28
SCS7YMR272C YLR455WQ06188 304 aa7.03□□□□□ -1.28
SCS7YMR272C NOC3Q07896 663 aaPredicted RBP7.03□□□□□ -1.28
SCS7YMR272C TRL1P09880 827 aaKnown RBP7.02□□□□□ -1.29
SCS7YMR272C SUP45P12385 437 aaKnown RBP7.02□□□□□ -1.29
SCS7YMR272C ALG1P16661 449 aa7.02□□□□□ -1.29
SCS7YMR272C COT1P32798 439 aa7.02□□□□□ -1.29
SCS7YMR272C RFC5P38251 354 aa7.02□□□□□ -1.29
SCS7YMR272C RGD1P38339 666 aa7.02□□□□□ -1.29
SCS7YMR272C CTF18P49956 741 aa7.02□□□□□ -1.29
SCS7YMR272C YGL081WP53156 320 aa7.02□□□□□ -1.29
SCS7YMR272C YGR130CP53278 816 aa7.02□□□□□ -1.29
SCS7YMR272C CBK1P53894 756 aa7.02□□□□□ -1.29
SCS7YMR272C PGA2P53903 129 aa7.02□□□□□ -1.29
SCS7YMR272C MUK1Q02866 612 aa7.02□□□□□ -1.29
SCS7YMR272C COQ9Q05779 260 aa7.02□□□□□ -1.29
SCS7YMR272C TSR3Q12094 313 aaKnown RBP7.02□□□□□ -1.29
SCS7YMR272C YAP1801P38856 637 aa7.01□□□□□ -1.29
SCS7YMR272C FMP10P40098 244 aa7.01□□□□□ -1.29
SCS7YMR272C NUP82P40368 713 aa7.01□□□□□ -1.29
SCS7YMR272C ATG32P40458 529 aa7.01□□□□□ -1.29
SCS7YMR272C EMI2Q04409 500 aaKnown RBP7.01□□□□□ -1.29
SCS7YMR272C FUS2Q05670 677 aa7.01□□□□□ -1.29
SCS7YMR272C YPR117WQ06116 2489 aa7.01□□□□□ -1.29
SCS7YMR272C DED1P06634 604 aaKnown RBP7□□□□□ -1.29
SCS7YMR272C CDC6P09119 513 aa7□□□□□ -1.29
SCS7YMR272C SIP3P38717 1229 aa7□□□□□ -1.29
SCS7YMR272C BFA1P47113 574 aa7□□□□□ -1.29
SCS7YMR272C ENT3P47160 408 aa7□□□□□ -1.29
SCS7YMR272C MAP1Q01662 387 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
SCS7YMR272C ROD1Q02805 837 aa7□□□□□ -1.29
SCS7YMR272C FOB1O13329 566 aa6.99□□□□□ -1.29
SCS7YMR272C HXK1P04806 485 aaKnown RBP6.99□□□□□ -1.29
SCS7YMR272C RGP1P16664 663 aa6.99□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 386 ms