RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C LAM1P38851 1228 aa5.07□□□□□ -1.6
SSO2YMR183C NUG1P40010 520 aaKnown RBP5.07□□□□□ -1.6
SSO2YMR183C MAD1P40957 749 aa5.07□□□□□ -1.6
SSO2YMR183C FAA4P47912 694 aaKnown RBP5.07□□□□□ -1.6
SSO2YMR183C GDE1Q02979 1223 aa5.07□□□□□ -1.6
SSO2YMR183C URN1Q06525 465 aaKnown RBP5.07□□□□□ -1.6
SSO2YMR183C PIN2Q12057 282 aa5.07□□□□□ -1.6
SSO2YMR183C YPL066WQ12194 479 aa5.07□□□□□ -1.6
SSO2YMR183C THS1P04801 734 aaKnown RBP5.06□□□□□ -1.6
SSO2YMR183C KIN2P13186 1147 aaKnown RBP5.06□□□□□ -1.6
SSO2YMR183C SLA2P33338 968 aa5.06□□□□□ -1.6
SSO2YMR183C YKL107WP34251 309 aa5.06□□□□□ -1.6
SSO2YMR183C SNF7P39929 240 aaKnown RBP5.06□□□□□ -1.6
SSO2YMR183C RRT14P40470 206 aa5.06□□□□□ -1.6
SSO2YMR183C YGL176CP46945 554 aa5.06□□□□□ -1.6
SSO2YMR183C YJR008WP47085 338 aa5.06□□□□□ -1.6
SSO2YMR183C RTS3P53289 263 aa5.06□□□□□ -1.6
SSO2YMR183C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
SSO2YMR183C VPS16Q03308 798 aa5.06□□□□□ -1.6
SSO2YMR183C YDR132CQ03900 495 aa5.06□□□□□ -1.6
SSO2YMR183C BI4P03879 638 aa5.05□□□□□ -1.6
SSO2YMR183C MEF2P39677 819 aa5.05□□□□□ -1.6
SSO2YMR183C KRI1P42846 591 aaKnown RBP5.05□□□□□ -1.6
SSO2YMR183C YLR225CQ05948 407 aaKnown RBP5.05□□□□□ -1.6
SSO2YMR183C JIP5Q06214 492 aaPredicted RBP5.05□□□□□ -1.6
SSO2YMR183C RIB2Q12362 591 aaKnown RBP5.05□□□□□ -1.6
SSO2YMR183C GAL10P04397 699 aa5.04□□□□□ -1.6
SSO2YMR183C CMP2P14747 604 aa5.04□□□□□ -1.6
SSO2YMR183C ACE2P21192 770 aa5.04□□□□□ -1.6
SSO2YMR183C APL1P27351 700 aa5.04□□□□□ -1.6
SSO2YMR183C PIN4P34217 668 aaKnown RBP RIP-Chip data5.04□□□□□ -1.6not detected
SSO2YMR183C TOD6P34219 525 aa5.04□□□□□ -1.6
SSO2YMR183C SIP5P40210 489 aaKnown RBP5.04□□□□□ -1.6
SSO2YMR183C CWC24P53769 259 aa5.04□□□□□ -1.6
SSO2YMR183C GCN5Q03330 439 aa5.04□□□□□ -1.6
SSO2YMR183C SIZ1Q04195 904 aa5.04□□□□□ -1.6
SSO2YMR183C SRM1P21827 482 aa5.03□□□□□ -1.6
SSO2YMR183C PLB2Q03674 706 aa5.03□□□□□ -1.6
SSO2YMR183C ROT1Q03691 256 aa5.03□□□□□ -1.6
SSO2YMR183C AGP1P25376 633 aa5.02□□□□□ -1.61
SSO2YMR183C ABD1P32783 436 aaPredicted RBP5.02□□□□□ -1.61
SSO2YMR183C PPG1P32838 368 aa5.02□□□□□ -1.61
SSO2YMR183C ATG36P46983 293 aa5.02□□□□□ -1.61
SSO2YMR183C SPT20P50875 604 aa5.02□□□□□ -1.61
SSO2YMR183C YRB30P53107 440 aaPredicted RBP5.02□□□□□ -1.61
SSO2YMR183C RNH70P53331 553 aa5.02□□□□□ -1.61
SSO2YMR183C SUB1P54000 292 aaKnown RBP5.02□□□□□ -1.61
SSO2YMR183C ESC2Q06340 456 aa5.02□□□□□ -1.61
SSO2YMR183C FAL1Q12099 399 aaKnown RBP5.02□□□□□ -1.61
SSO2YMR183C YOL098CQ12496 1037 aa5.02□□□□□ -1.61
SSO2YMR183C PRE10P21242 288 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
SSO2YMR183C SBA1P28707 216 aaKnown RBP5.01□□□□□ -1.61
SSO2YMR183C RRP14P36080 434 aaKnown RBP5.01□□□□□ -1.61
SSO2YMR183C HFM1P51979 1187 aa5.01□□□□□ -1.61
SSO2YMR183C MSC2Q03455 724 aa5.01□□□□□ -1.61
SSO2YMR183C DUS4Q06063 367 aa5.01□□□□□ -1.61
SSO2YMR183C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
SSO2YMR183C YLR358CO13565 187 aa5□□□□□ -1.61
SSO2YMR183C DOM34P33309 386 aa5□□□□□ -1.61
SSO2YMR183C MTC3P53077 123 aa5□□□□□ -1.61
SSO2YMR183C PBP1P53297 722 aaKnown RBP5□□□□□ -1.61
SSO2YMR183C OPI10Q08202 246 aa5□□□□□ -1.61
SSO2YMR183C YLL058WQ12198 575 aa5□□□□□ -1.61
SSO2YMR183C RXT3Q07458 294 aa4.99□□□□□ -1.61
SSO2YMR183C SWE1P32944 819 aa4.98□□□□□ -1.61
SSO2YMR183C YKL151CP36059 337 aa4.98□□□□□ -1.61
SSO2YMR183C FPR3P38911 411 aaKnown RBP4.98□□□□□ -1.61
SSO2YMR183C CLU1Q03690 1277 aaKnown RBP4.98□□□□□ -1.61
SSO2YMR183C SHE9Q04172 456 aa4.98□□□□□ -1.61
SSO2YMR183C HRQ1Q05549 1077 aa4.98□□□□□ -1.61
SSO2YMR183C MDM38Q08179 573 aa4.98□□□□□ -1.61
SSO2YMR183C GPB1Q08886 897 aa4.98□□□□□ -1.61
SSO2YMR183C PNS1Q12412 539 aa4.98□□□□□ -1.61
SSO2YMR183C CDC20P26309 610 aa4.97□□□□□ -1.61
SSO2YMR183C SRP40P32583 406 aaPredicted RBP4.97□□□□□ -1.61
SSO2YMR183C ACK1Q07622 623 aaPredicted RBP4.97□□□□□ -1.61
SSO2YMR183C OSW2Q12202 724 aa4.97□□□□□ -1.61
SSO2YMR183C TUB2P02557 457 aaKnown RBP4.96□□□□□ -1.62
SSO2YMR183C CDC6P09119 513 aa4.96□□□□□ -1.62
SSO2YMR183C TSR4P25040 408 aa4.96□□□□□ -1.62
SSO2YMR183C YKL091CP33324 310 aaKnown RBP4.96□□□□□ -1.62
SSO2YMR183C VBA5P36172 582 aa4.96□□□□□ -1.62
SSO2YMR183C YAP1801P38856 637 aa4.96□□□□□ -1.62
SSO2YMR183C MBP1P39678 833 aa4.96□□□□□ -1.62
SSO2YMR183C VAC8P39968 578 aa4.96□□□□□ -1.62
SSO2YMR183C OSW7P43611 510 aa4.96□□□□□ -1.62
SSO2YMR183C ALD6P54115 500 aaKnown RBP4.96□□□□□ -1.62
SSO2YMR183C VPS72Q03388 795 aa4.96□□□□□ -1.62
SSO2YMR183C PRI2P20457 528 aa4.95□□□□□ -1.62
SSO2YMR183C TOM20P35180 183 aa4.95□□□□□ -1.62
SSO2YMR183C YKL069WP36088 180 aa4.95□□□□□ -1.62
SSO2YMR183C TAT2P38967 592 aa4.95□□□□□ -1.62
SSO2YMR183C SAH1P39954 449 aaKnown RBP4.95□□□□□ -1.62
SSO2YMR183C MND2P40577 368 aa4.95□□□□□ -1.62
SSO2YMR183C GTF1P53260 183 aaPredicted RBP4.95□□□□□ -1.62
SSO2YMR183C VPS62P53285 467 aa4.95□□□□□ -1.62
SSO2YMR183C SRP1Q02821 542 aaKnown RBP4.95□□□□□ -1.62
SSO2YMR183C XYL2Q07993 356 aa4.95□□□□□ -1.62
SSO2YMR183C ZRG8P40021 1076 aa4.94□□□□□ -1.62
SSO2YMR183C SRT1Q03175 343 aa4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 78.2 ms