RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C YCR015CP25616 317 aa5.61□□□□□ -1.51
SUB1YMR039C TOD6P34219 525 aa5.61□□□□□ -1.51
SUB1YMR039C FLR1P38124 548 aa5.61□□□□□ -1.51
SUB1YMR039C SIP5P40210 489 aaKnown RBP5.61□□□□□ -1.51
SUB1YMR039C MAP1Q01662 387 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
SUB1YMR039C GCN5Q03330 439 aa5.61□□□□□ -1.51
SUB1YMR039C GAL10P04397 699 aa5.6□□□□□ -1.51
SUB1YMR039C PRE10P21242 288 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SUB1YMR039C APL1P27351 700 aa5.6□□□□□ -1.51
SUB1YMR039C PIN4P34217 668 aaKnown RBP RIP-Chip data5.6□□□□□ -1.51not detected
SUB1YMR039C PLB2Q03674 706 aa5.6□□□□□ -1.51
SUB1YMR039C JIP5Q06214 492 aaPredicted RBP5.6□□□□□ -1.51
SUB1YMR039C CMP2P14747 604 aa5.59□□□□□ -1.51
SUB1YMR039C AGP1P25376 633 aa5.59□□□□□ -1.51
SUB1YMR039C DUS4Q06063 367 aa5.59□□□□□ -1.51
SUB1YMR039C YLR358CO13565 187 aa5.58□□□□□ -1.52
SUB1YMR039C DOM34P33309 386 aa5.58□□□□□ -1.52
SUB1YMR039C TAF1P46677 1066 aa5.58□□□□□ -1.52
SUB1YMR039C SPT20P50875 604 aa5.58□□□□□ -1.52
SUB1YMR039C CWC24P53769 259 aa5.58□□□□□ -1.52
SUB1YMR039C MSC2Q03455 724 aa5.58□□□□□ -1.52
SUB1YMR039C ROT1Q03691 256 aa5.58□□□□□ -1.52
SUB1YMR039C ESC2Q06340 456 aa5.58□□□□□ -1.52
SUB1YMR039C FAL1Q12099 399 aaKnown RBP5.58□□□□□ -1.52
SUB1YMR039C SBA1P28707 216 aaKnown RBP5.57□□□□□ -1.52
SUB1YMR039C ABD1P32783 436 aaPredicted RBP5.57□□□□□ -1.52
SUB1YMR039C YKL222CP35995 705 aa5.57□□□□□ -1.52
SUB1YMR039C GIP4P39732 760 aa5.57□□□□□ -1.52
SUB1YMR039C MTC3P53077 123 aa5.57□□□□□ -1.52
SUB1YMR039C PBP1P53297 722 aaKnown RBP5.57□□□□□ -1.52
SUB1YMR039C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
SUB1YMR039C YLL058WQ12198 575 aa5.57□□□□□ -1.52
SUB1YMR039C HFM1P51979 1187 aa5.56□□□□□ -1.52
SUB1YMR039C CLU1Q03690 1277 aaKnown RBP5.56□□□□□ -1.52
SUB1YMR039C CDC6P09119 513 aa5.55□□□□□ -1.52
SUB1YMR039C YKL151CP36059 337 aa5.55□□□□□ -1.52
SUB1YMR039C RXT3Q07458 294 aa5.55□□□□□ -1.52
SUB1YMR039C OPI10Q08202 246 aa5.55□□□□□ -1.52
SUB1YMR039C CDC20P26309 610 aa5.54□□□□□ -1.52
SUB1YMR039C PAM1P37304 830 aaKnown RBP5.54□□□□□ -1.52
SUB1YMR039C SHE9Q04172 456 aa5.54□□□□□ -1.52
SUB1YMR039C HRQ1Q05549 1077 aa5.54□□□□□ -1.52
SUB1YMR039C ACK1Q07622 623 aaPredicted RBP5.54□□□□□ -1.52
SUB1YMR039C GPB1Q08886 897 aa5.54□□□□□ -1.52
SUB1YMR039C VPS62P53285 467 aa5.53□□□□□ -1.52
SUB1YMR039C MDM38Q08179 573 aa5.53□□□□□ -1.52
SUB1YMR039C VBA5P36172 582 aa5.52□□□□□ -1.53
SUB1YMR039C TAT2P38967 592 aa5.52□□□□□ -1.53
SUB1YMR039C MBP1P39678 833 aa5.52□□□□□ -1.53
SUB1YMR039C XYL2Q07993 356 aa5.52□□□□□ -1.53
SUB1YMR039C OSW2Q12202 724 aa5.52□□□□□ -1.53
SUB1YMR039C FUN30P31380 1131 aa5.51□□□□□ -1.53
SUB1YMR039C YKL069WP36088 180 aa5.51□□□□□ -1.53
SUB1YMR039C YAP1801P38856 637 aa5.51□□□□□ -1.53
SUB1YMR039C VAC8P39968 578 aa5.51□□□□□ -1.53
SUB1YMR039C MND2P40577 368 aa5.51□□□□□ -1.53
SUB1YMR039C ALD6P54115 500 aaKnown RBP5.51□□□□□ -1.53
SUB1YMR039C SRT1Q03175 343 aa5.51□□□□□ -1.53
SUB1YMR039C HMI1Q12039 706 aa5.51□□□□□ -1.53
SUB1YMR039C CTS1P29029 562 aa5.5□□□□□ -1.53
SUB1YMR039C CDC12P32468 407 aaKnown RBP5.5□□□□□ -1.53
SUB1YMR039C MRP8P35719 219 aa5.5□□□□□ -1.53
SUB1YMR039C SRP1Q02821 542 aaKnown RBP5.5□□□□□ -1.53
SUB1YMR039C ADY3Q07732 790 aa5.5□□□□□ -1.53
SUB1YMR039C PRI2P20457 528 aa5.49□□□□□ -1.53
SUB1YMR039C STE11P23561 717 aa5.49□□□□□ -1.53
SUB1YMR039C GIC1P38785 314 aa5.49□□□□□ -1.53
SUB1YMR039C MPT5P39016 859 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
SUB1YMR039C SAH1P39954 449 aaKnown RBP5.49□□□□□ -1.53
SUB1YMR039C ZRG8P40021 1076 aa5.49□□□□□ -1.53
SUB1YMR039C GUS1P46655 708 aaKnown RBP RIP-Chip data5.49□□□□□ -1.53not detected
SUB1YMR039C GTF1P53260 183 aaPredicted RBP5.49□□□□□ -1.53
SUB1YMR039C NOP12Q08208 459 aaKnown RBP5.49□□□□□ -1.53
SUB1YMR039C LST4P34239 828 aa5.48□□□□□ -1.53
SUB1YMR039C SHM2P37291 469 aaKnown RBP5.48□□□□□ -1.53
SUB1YMR039C ECM21P38167 1117 aaKnown RBP5.48□□□□□ -1.53
SUB1YMR039C YAP6Q03935 383 aa5.48□□□□□ -1.53
SUB1YMR039C YLR224WQ05947 369 aa5.48□□□□□ -1.53
SUB1YMR039C TPO1Q07824 586 aa5.48□□□□□ -1.53
SUB1YMR039C RPP2AP05319 106 aaKnown RBP5.47□□□□□ -1.53
SUB1YMR039C EMC1P25574 760 aa5.47□□□□□ -1.53
SUB1YMR039C RPC82P32349 654 aa5.47□□□□□ -1.53
SUB1YMR039C POA1P38218 177 aa5.47□□□□□ -1.53
SUB1YMR039C SPF1P39986 1215 aaKnown RBP5.47□□□□□ -1.53
SUB1YMR039C MET12P46151 657 aa5.47□□□□□ -1.53
SUB1YMR039C GCV2P49095 1034 aa5.47□□□□□ -1.53
SUB1YMR039C DUS3Q06053 668 aaKnown RBP5.47□□□□□ -1.53
SUB1YMR039C CDA1Q06702 301 aa5.47□□□□□ -1.53
SUB1YMR039C ENA1P13587 1091 aa5.46□□□□□ -1.54
SUB1YMR039C PBY1P38254 753 aa5.46□□□□□ -1.54
SUB1YMR039C NPP2P39997 493 aa5.46□□□□□ -1.54
SUB1YMR039C IRR1P40541 1150 aa5.46□□□□□ -1.54
SUB1YMR039C MNN10P50108 393 aaKnown RBP5.46□□□□□ -1.54
SUB1YMR039C ENA2Q01896 1091 aa5.46□□□□□ -1.54
SUB1YMR039C TMA10Q06177 86 aa5.46□□□□□ -1.54
SUB1YMR039C ENA5Q12691 1091 aa5.46□□□□□ -1.54
SUB1YMR039C YKR078WP36158 585 aaKnown RBP5.45□□□□□ -1.54
SUB1YMR039C GYP7P48365 746 aa5.45□□□□□ -1.54
SUB1YMR039C YGR012WP53206 393 aa5.45□□□□□ -1.54
SUB1YMR039C TDA5Q06417 326 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 16.6 ms