RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A YMR321CQ04898 105 aa14.11□□□□□ -0.15
LSM3YLR438C-A YEL076C-AP0CX16 216 aa14.1□□□□□ -0.15
LSM3YLR438C-A YLR464WP0CX17 216 aa14.1□□□□□ -0.15
LSM3YLR438C-A CLC1P17891 233 aa14.1□□□□□ -0.15
LSM3YLR438C-A TIM23P32897 222 aa14.1□□□□□ -0.15
LSM3YLR438C-A NOC2P39744 710 aaKnown RBP14.1□□□□□ -0.15
LSM3YLR438C-A YEL076CP39971 216 aa14.1□□□□□ -0.15
LSM3YLR438C-A BRE2P43132 505 aa14.1□□□□□ -0.15
LSM3YLR438C-A RSC1P53236 928 aa14.1□□□□□ -0.15
LSM3YLR438C-A TAF13P11747 167 aa14.09□□□□□ -0.15
LSM3YLR438C-A FIS1P40515 155 aa14.09□□□□□ -0.15
LSM3YLR438C-A GUP1P53154 560 aa14.09□□□□□ -0.15
LSM3YLR438C-A MDR1P53258 950 aa14.09□□□□□ -0.15
LSM3YLR438C-A MIP1P15801 1254 aa14.08□□□□□ -0.16
LSM3YLR438C-A PFK1P16861 987 aaKnown RBP14.08□□□□□ -0.16
LSM3YLR438C-A ISY1P21374 235 aaPredicted RBP14.08□□□□□ -0.16
LSM3YLR438C-A GSY2P27472 705 aa14.08□□□□□ -0.16
LSM3YLR438C-A ATG19P35193 415 aa14.08□□□□□ -0.16
LSM3YLR438C-A ULP2P40537 1034 aaPredicted RBP14.08□□□□□ -0.16
LSM3YLR438C-A YJR107WP47145 328 aa14.08□□□□□ -0.16
LSM3YLR438C-A RPS7BP48164 190 aaKnown RBP14.08□□□□□ -0.16
LSM3YLR438C-A YPR148CQ06523 435 aa14.08□□□□□ -0.16
LSM3YLR438C-A GPT2P36148 743 aa14.07□□□□□ -0.16
LSM3YLR438C-A PPS1P38148 807 aa14.07□□□□□ -0.16
LSM3YLR438C-A YEL025CP39991 1188 aa14.07□□□□□ -0.16
LSM3YLR438C-A SEC5P89102 971 aa14.07□□□□□ -0.16
LSM3YLR438C-A HCR1Q05775 265 aaKnown RBP14.07□□□□□ -0.16
LSM3YLR438C-A GPI13Q07830 1017 aa14.07□□□□□ -0.16
LSM3YLR438C-A SMC5Q08204 1093 aa14.07□□□□□ -0.16
LSM3YLR438C-A PDC1P06169 563 aaKnown RBP14.06□□□□□ -0.16
LSM3YLR438C-A POX1P13711 748 aa14.06□□□□□ -0.16
LSM3YLR438C-A PRP22P24384 1145 aaKnown RBP14.06□□□□□ -0.16
LSM3YLR438C-A NCS2P53923 493 aaPredicted RBP14.06□□□□□ -0.16
LSM3YLR438C-A LCD1Q04377 747 aa14.06□□□□□ -0.16
LSM3YLR438C-A YOR131CQ12486 218 aa14.06□□□□□ -0.16
LSM3YLR438C-A TCP1P12612 559 aaKnown RBP14.05□□□□□ -0.16
LSM3YLR438C-A RKM3P38222 552 aa14.05□□□□□ -0.16
LSM3YLR438C-A BRE5P53741 515 aaKnown RBP14.05□□□□□ -0.16
LSM3YLR438C-A AFT2Q08957 416 aa14.05□□□□□ -0.16
LSM3YLR438C-A DBP1P24784 617 aaKnown RBP14.04□□□□□ -0.16
LSM3YLR438C-A KNS1P32350 737 aaPredicted RBP14.04□□□□□ -0.16
LSM3YLR438C-A PAH1P32567 862 aa14.04□□□□□ -0.16
LSM3YLR438C-A YFL034WP43564 1073 aa14.04□□□□□ -0.16
LSM3YLR438C-A PSP2P50109 593 aaKnown RBP14.04□□□□□ -0.16
LSM3YLR438C-A ULP1Q02724 621 aa14.04□□□□□ -0.16
LSM3YLR438C-A SUT2Q12286 268 aa14.04□□□□□ -0.16
LSM3YLR438C-A MAS2P11914 482 aa14.03□□□□□ -0.16
LSM3YLR438C-A ATE1P16639 503 aa14.03□□□□□ -0.16
LSM3YLR438C-A DBP5P20449 482 aaKnown RBP14.03□□□□□ -0.16
LSM3YLR438C-A SCS3P53012 380 aa14.03□□□□□ -0.16
LSM3YLR438C-A SPP382Q06411 708 aaPredicted RBP14.03□□□□□ -0.16
LSM3YLR438C-A NOC3Q07896 663 aaPredicted RBP14.03□□□□□ -0.16
LSM3YLR438C-A OM45P16547 393 aa14.02□□□□□ -0.17
LSM3YLR438C-A YKL091CP33324 310 aaKnown RBP14.02□□□□□ -0.17
LSM3YLR438C-A ADE17P38009 592 aaKnown RBP14.02□□□□□ -0.17
LSM3YLR438C-A SKP2P42843 763 aa14.02□□□□□ -0.17
LSM3YLR438C-A GFD1Q04839 188 aaKnown RBP14.02□□□□□ -0.17
LSM3YLR438C-A VPS35P34110 944 aa14.01□□□□□ -0.17
LSM3YLR438C-A UBP13P38187 747 aa14.01□□□□□ -0.17
LSM3YLR438C-A BCD1P38772 366 aa14.01□□□□□ -0.17
LSM3YLR438C-A TFG2P41896 400 aaPredicted RBP14.01□□□□□ -0.17
LSM3YLR438C-A TOF1P53840 1238 aa14.01□□□□□ -0.17
LSM3YLR438C-A CDC37P06101 506 aaKnown RBP14□□□□□ -0.17
LSM3YLR438C-A RPC53P25441 422 aa14□□□□□ -0.17
LSM3YLR438C-A MRPL10P36520 322 aa14□□□□□ -0.17
LSM3YLR438C-A FLR1P38124 548 aa14□□□□□ -0.17
LSM3YLR438C-A YGR237CP50089 785 aa14□□□□□ -0.17
LSM3YLR438C-A DAK1P54838 584 aaKnown RBP14□□□□□ -0.17
LSM3YLR438C-A NCR1Q12200 1170 aa14□□□□□ -0.17
LSM3YLR438C-A PCK1P10963 549 aa13.99□□□□□ -0.17
LSM3YLR438C-A SNA3P14359 133 aa13.99□□□□□ -0.17
LSM3YLR438C-A PSO2P30620 661 aa13.99□□□□□ -0.17
LSM3YLR438C-A MRF1P30775 413 aaPredicted RBP13.99□□□□□ -0.17
LSM3YLR438C-A RME1P32338 300 aaKnown RBP13.99□□□□□ -0.17
LSM3YLR438C-A IRE1P32361 1115 aa13.99□□□□□ -0.17
LSM3YLR438C-A EAF5P39995 279 aa13.99□□□□□ -0.17
LSM3YLR438C-A YPL277CQ08989 487 aa13.99□□□□□ -0.17
LSM3YLR438C-A MAM3Q12296 706 aa13.99□□□□□ -0.17
LSM3YLR438C-A RTP1Q12751 981 aa13.99□□□□□ -0.17
LSM3YLR438C-A DED1P06634 604 aaKnown RBP13.98□□□□□ -0.17
LSM3YLR438C-A UBC1P21734 215 aaKnown RBP13.98□□□□□ -0.17
LSM3YLR438C-A BCS1P32839 456 aa13.98□□□□□ -0.17
LSM3YLR438C-A MIC60P36112 540 aa13.98□□□□□ -0.17
LSM3YLR438C-A KSP1P38691 1029 aaKnown RBP13.98□□□□□ -0.17
LSM3YLR438C-A SSL2Q00578 843 aa13.98□□□□□ -0.17
LSM3YLR438C-A MSC2Q03455 724 aa13.98□□□□□ -0.17
LSM3YLR438C-A YML020WQ03722 664 aa13.98□□□□□ -0.17
LSM3YLR438C-A YPL216WQ08964 1102 aa13.98□□□□□ -0.17
LSM3YLR438C-A AFT1P22149 690 aa13.97□□□□□ -0.17
LSM3YLR438C-A PGM2P37012 569 aaKnown RBP13.97□□□□□ -0.17
LSM3YLR438C-A CCM1P48237 864 aaPredicted RBP13.97□□□□□ -0.17
LSM3YLR438C-A VID30P53076 958 aa13.97□□□□□ -0.17
LSM3YLR438C-A VPS62P53285 467 aa13.97□□□□□ -0.17
LSM3YLR438C-A LSC2P53312 427 aa13.97□□□□□ -0.17
LSM3YLR438C-A ROD1Q02805 837 aa13.97□□□□□ -0.17
LSM3YLR438C-A OSW2Q12202 724 aa13.97□□□□□ -0.17
LSM3YLR438C-A FKS1P38631 1876 aaKnown RBP13.96□□□□□ -0.17
LSM3YLR438C-A COT1P32798 439 aa13.96□□□□□ -0.17
LSM3YLR438C-A AIM21P40563 679 aa13.96□□□□□ -0.17
LSM3YLR438C-A MGA2P40578 1113 aa13.96□□□□□ -0.17
Retrieved 100 of 5,963 RNA–protein pairs in 47.7 ms