RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDF1	YLR399C	YML119W	Q03208	357 aa		13.26	□□□□□ -0.29
BDF1	YLR399C	SLK19	Q08581	821 aa	Known RBP	13.26	□□□□□ -0.29
BDF1	YLR399C	RRP14	P36080	434 aa	Known RBP	13.25	□□□□□ -0.29
BDF1	YLR399C	IRC8	P47046	822 aa		13.25	□□□□□ -0.29
BDF1	YLR399C	TAD1	P53065	400 aa		13.25	□□□□□ -0.29
BDF1	YLR399C	ARI1	P53111	347 aa	Known RBP	13.25	□□□□□ -0.29
BDF1	YLR399C	ATP25	Q03153	612 aa		13.25	□□□□□ -0.29
BDF1	YLR399C	PRP9	P19736	530 aa	Known RBP	13.25	□□□□□ -0.29
BDF1	YLR399C	APL6	P46682	809 aa		13.25	□□□□□ -0.29
BDF1	YLR399C	ATG36	P46983	293 aa		13.25	□□□□□ -0.29
BDF1	YLR399C	RPC17	P47076	161 aa		13.25	□□□□□ -0.29
BDF1	YLR399C	UFD2	P54860	961 aa		13.25	□□□□□ -0.29
BDF1	YLR399C	GDE1	Q02979	1223 aa		13.25	□□□□□ -0.29
BDF1	YLR399C	PRP42	Q03776	544 aa	Known RBP	13.25	□□□□□ -0.29
BDF1	YLR399C	INP2	Q03824	705 aa		13.25	□□□□□ -0.29
BDF1	YLR399C	PNP1	Q05788	311 aa		13.25	□□□□□ -0.29
BDF1	YLR399C	ECI1	Q05871	280 aa		13.25	□□□□□ -0.29
BDF1	YLR399C	ALG1	P16661	449 aa		13.24	□□□□□ -0.29
BDF1	YLR399C	LIN1	P38852	340 aa	Predicted RBP	13.24	□□□□□ -0.29
BDF1	YLR399C	TDA11	P38854	504 aa		13.24	□□□□□ -0.29
BDF1	YLR399C	DAK2	P43550	591 aa		13.24	□□□□□ -0.29
BDF1	YLR399C	VTC2	P43585	828 aa		13.24	□□□□□ -0.29
BDF1	YLR399C	REC107	P21651	314 aa		13.24	□□□□□ -0.29
BDF1	YLR399C	TOM71	P38825	639 aa	Known RBP	13.24	□□□□□ -0.29
BDF1	YLR399C	YFL034W	P43564	1073 aa		13.24	□□□□□ -0.29
BDF1	YLR399C	INP52	P50942	1183 aa		13.24	□□□□□ -0.29
BDF1	YLR399C	RIO1	Q12196	484 aa	Known RBP	13.24	□□□□□ -0.29
BDF1	YLR399C	ERG11	P10614	530 aa		13.23	□□□□□ -0.29
BDF1	YLR399C	CDC27	P38042	758 aa		13.23	□□□□□ -0.29
BDF1	YLR399C	BEM4	P39011	633 aa		13.23	□□□□□ -0.29
BDF1	YLR399C	AIM20	P40451	204 aa		13.23	□□□□□ -0.29
BDF1	YLR399C	NDL1	Q06568	189 aa		13.23	□□□□□ -0.29
BDF1	YLR399C	KEX2	P13134	814 aa		13.22	□□□□□ -0.29
BDF1	YLR399C	SRV2	P17555	526 aa	Known RBP	13.22	□□□□□ -0.29
BDF1	YLR399C	SSE1	P32589	693 aa	Known RBP	13.22	□□□□□ -0.29
BDF1	YLR399C	GIS4	Q04233	774 aa		13.22	□□□□□ -0.29
BDF1	YLR399C	TUM1	Q08686	304 aa	Known RBP	13.22	□□□□□ -0.29
BDF1	YLR399C	YOR111W	Q99210	232 aa		13.22	□□□□□ -0.29
BDF1	YLR399C	VID27	P40157	782 aa		13.22	□□□□□ -0.29
BDF1	YLR399C	SAP185	P40856	1058 aa		13.22	□□□□□ -0.29
BDF1	YLR399C	MDR1	P53258	950 aa		13.22	□□□□□ -0.29
BDF1	YLR399C	IMH1	Q06704	911 aa	Known RBP	13.22	□□□□□ -0.29
BDF1	YLR399C	NUC1	P08466	329 aa		13.21	□□□□□ -0.29
BDF1	YLR399C	OM45	P16547	393 aa		13.21	□□□□□ -0.29
BDF1	YLR399C	PWP1	P21304	576 aa	Known RBP	13.21	□□□□□ -0.29
BDF1	YLR399C	RPL5	P26321	297 aa	Known RBP	13.21	□□□□□ -0.29
BDF1	YLR399C	XRS2	P33301	854 aa		13.21	□□□□□ -0.29
BDF1	YLR399C	YKL091C	P33324	310 aa	Known RBP	13.21	□□□□□ -0.29
BDF1	YLR399C	MAL31	P38156	614 aa		13.21	□□□□□ -0.29
BDF1	YLR399C	RSC8	P43609	557 aa	Known RBP	13.21	□□□□□ -0.29
BDF1	YLR399C	NMD5	P46970	1048 aa		13.21	□□□□□ -0.29
BDF1	YLR399C	CPR6	P53691	371 aa	Known RBP	13.21	□□□□□ -0.29
BDF1	YLR399C	RTC4	P53850	401 aa		13.21	□□□□□ -0.29
BDF1	YLR399C	FRA1	Q07825	749 aa		13.21	□□□□□ -0.29
BDF1	YLR399C	RTP1	Q12751	981 aa		13.21	□□□□□ -0.29
BDF1	YLR399C	LHS1	P36016	881 aa		13.2	□□□□□ -0.3
BDF1	YLR399C	JNM1	P36224	373 aa		13.2	□□□□□ -0.3
BDF1	YLR399C	TMA64	Q04600	565 aa	Known RBP	13.2	□□□□□ -0.3
BDF1	YLR399C	YSH1	Q06224	779 aa	Predicted RBP	13.2	□□□□□ -0.3
BDF1	YLR399C	ADR1	P07248	1323 aa		13.2	□□□□□ -0.3
BDF1	YLR399C	POL3	P15436	1097 aa		13.2	□□□□□ -0.3
BDF1	YLR399C	NAM7	P30771	971 aa	Known RBP	13.2	□□□□□ -0.3
BDF1	YLR399C	SEC27	P41811	889 aa	Known RBP	13.2	□□□□□ -0.3
BDF1	YLR399C	KAP114	P53067	1004 aa		13.2	□□□□□ -0.3
BDF1	YLR399C	SUM1	P46676	1062 aa		13.19	□□□□□ -0.3
BDF1	YLR399C	BRO1	P48582	844 aa		13.19	□□□□□ -0.3
BDF1	YLR399C	YPR097W	Q06839	1073 aa		13.19	□□□□□ -0.3
BDF1	YLR399C	MLH2	Q07980	695 aa		13.19	□□□□□ -0.3
BDF1	YLR399C	GPN2	Q08726	347 aa	Predicted RBP	13.19	□□□□□ -0.3
BDF1	YLR399C	CEX1	Q12453	761 aa		13.19	□□□□□ -0.3
BDF1	YLR399C	SEY1	Q99287	776 aa		13.19	□□□□□ -0.3
BDF1	YLR399C	MET6	P05694	767 aa	Known RBP	13.19	□□□□□ -0.3
BDF1	YLR399C	PDR1	P12383	1068 aa		13.19	□□□□□ -0.3
BDF1	YLR399C	TYR1	P20049	452 aa		13.19	□□□□□ -0.3
BDF1	YLR399C	MLS1	P30952	554 aa		13.19	□□□□□ -0.3
BDF1	YLR399C	KAR9	P32526	644 aa		13.19	□□□□□ -0.3
BDF1	YLR399C	SPR3	P41901	512 aa		13.19	□□□□□ -0.3
BDF1	YLR399C	NAF1	P53919	492 aa	Known RBP	13.19	□□□□□ -0.3
BDF1	YLR399C	RPS15	Q01855	142 aa	Known RBP	13.19	□□□□□ -0.3
BDF1	YLR399C	ATG13	Q06628	738 aa		13.19	□□□□□ -0.3
BDF1	YLR399C	TIP41	Q12199	356 aa		13.19	□□□□□ -0.3
BDF1	YLR399C	TAL1	P15019	335 aa	Known RBP	13.18	□□□□□ -0.3
BDF1	YLR399C	RPC82	P32349	654 aa		13.18	□□□□□ -0.3
BDF1	YLR399C	IOC2	Q12072	812 aa		13.18	□□□□□ -0.3
BDF1	YLR399C	RAD16	P31244	790 aa		13.17	□□□□□ -0.3
BDF1	YLR399C	CSM2	P40465	213 aa		13.17	□□□□□ -0.3
BDF1	YLR399C	MMM1	P41800	426 aa		13.17	□□□□□ -0.3
BDF1	YLR399C	UBA2	P52488	636 aa		13.17	□□□□□ -0.3
BDF1	YLR399C	MCM6	P53091	1017 aa	Known RBP	13.17	□□□□□ -0.3
BDF1	YLR399C	FRK1	Q03002	865 aa	Predicted RBP	13.17	□□□□□ -0.3
BDF1	YLR399C	UTP14	Q04500	899 aa	Known RBP	13.17	□□□□□ -0.3
BDF1	YLR399C	TUF1	P02992	437 aa	Known RBP	13.17	□□□□□ -0.3
BDF1	YLR399C	RPC53	P25441	422 aa		13.17	□□□□□ -0.3
BDF1	YLR399C	GCN20	P43535	752 aa	Known RBP	13.17	□□□□□ -0.3
BDF1	YLR399C	SGM1	P47166	707 aa		13.17	□□□□□ -0.3
BDF1	YLR399C	HFD1	Q04458	532 aa		13.17	□□□□□ -0.3
BDF1	YLR399C	MPC54	Q08550	464 aa		13.17	□□□□□ -0.3
BDF1	YLR399C	UBP1	P25037	809 aa		13.16	□□□□□ -0.3
BDF1	YLR399C	ANP1	P32629	500 aa		13.16	□□□□□ -0.3
BDF1	YLR399C	SCS2	P40075	244 aa	Known RBP	13.16	□□□□□ -0.3

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms