RNA–Protein interactions for RNA: YLR229C

CDC42, Transcript of Small rho-like GTPase, yeastyeast

Gene CDC42, Length 576 nt, Biotype protein coding, Subcellular localisation Cellular bud, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC42YLR229C NEO1P40527 1151 aa5.04□□□□□ -1.6
CDC42YLR229C RPN11P43588 306 aaKnown RBP5.04□□□□□ -1.6
CDC42YLR229C SMC3P47037 1230 aa5.04□□□□□ -1.6
CDC42YLR229C YGR130CP53278 816 aa5.04□□□□□ -1.6
CDC42YLR229C HST1P53685 503 aa5.04□□□□□ -1.6
CDC42YLR229C ULP1Q02724 621 aa5.04□□□□□ -1.6
CDC42YLR229C FCP1Q03254 732 aa5.04□□□□□ -1.6
CDC42YLR229C FPR4Q06205 392 aaPredicted RBP5.04□□□□□ -1.6
CDC42YLR229C NYV1Q12255 253 aa5.04□□□□□ -1.6
CDC42YLR229C TAF13P11747 167 aa5.03□□□□□ -1.6
CDC42YLR229C YKL077WP36081 392 aa5.03□□□□□ -1.6
CDC42YLR229C KTR3P38130 404 aaPredicted RBP5.03□□□□□ -1.6
CDC42YLR229C BDH2P39713 417 aa5.03□□□□□ -1.6
CDC42YLR229C KRI1P42846 591 aaKnown RBP5.03□□□□□ -1.6
CDC42YLR229C GUP1P53154 560 aa5.03□□□□□ -1.6
CDC42YLR229C RSC1P53236 928 aa5.03□□□□□ -1.6
CDC42YLR229C MRPS35P53292 345 aa5.03□□□□□ -1.6
CDC42YLR229C CWC24P53769 259 aa5.03□□□□□ -1.6
CDC42YLR229C ALD3P54114 506 aa5.03□□□□□ -1.6
CDC42YLR229C ALO1P54783 526 aaKnown RBP5.03□□□□□ -1.6
CDC42YLR229C ETT1Q08421 412 aaKnown RBP5.03□□□□□ -1.6
CDC42YLR229C RIM20Q12033 661 aa5.03□□□□□ -1.6
CDC42YLR229C SNU66Q12420 587 aaPredicted RBP5.03□□□□□ -1.6
CDC42YLR229C RIM15P43565 1770 aa5.03□□□□□ -1.6
CDC42YLR229C PDC5P16467 563 aaKnown RBP5.02□□□□□ -1.61
CDC42YLR229C NPR1P22211 790 aa5.02□□□□□ -1.61
CDC42YLR229C MNR2P35724 969 aa5.02□□□□□ -1.61
CDC42YLR229C AAP1P37898 856 aaKnown RBP5.02□□□□□ -1.61
CDC42YLR229C NPR2P39923 615 aa5.02□□□□□ -1.61
CDC42YLR229C YJR124CP47159 448 aa5.02□□□□□ -1.61
CDC42YLR229C BIO5P53744 561 aaKnown RBP5.02□□□□□ -1.61
CDC42YLR229C YAF9P53930 226 aa5.02□□□□□ -1.61
CDC42YLR229C PEX13P80667 386 aa5.02□□□□□ -1.61
CDC42YLR229C ADI1Q03677 179 aa5.02□□□□□ -1.61
CDC42YLR229C SLP1Q12232 587 aa5.02□□□□□ -1.61
CDC42YLR229C GLO4Q12320 285 aa5.02□□□□□ -1.61
CDC42YLR229C SSK22P25390 1331 aaPredicted RBP5.01□□□□□ -1.61
CDC42YLR229C SAC3P46674 1301 aa5.01□□□□□ -1.61
CDC42YLR229C GPM1P00950 247 aaKnown RBP5.01□□□□□ -1.61
CDC42YLR229C BIK1P11709 440 aa5.01□□□□□ -1.61
CDC42YLR229C RNA1P11745 407 aaKnown RBP5.01□□□□□ -1.61
CDC42YLR229C SEC18P18759 758 aaKnown RBP5.01□□□□□ -1.61
CDC42YLR229C RPN12P32496 274 aa5.01□□□□□ -1.61
CDC42YLR229C RKM3P38222 552 aa5.01□□□□□ -1.61
CDC42YLR229C ALG14P38242 237 aa5.01□□□□□ -1.61
CDC42YLR229C HYR1P40581 163 aaKnown RBP5.01□□□□□ -1.61
CDC42YLR229C STU2P46675 888 aa5.01□□□□□ -1.61
CDC42YLR229C JJJ3P47138 172 aa5.01□□□□□ -1.61
CDC42YLR229C HOS3Q02959 697 aaKnown RBP5.01□□□□□ -1.61
CDC42YLR229C YMR074CQ04773 145 aa5.01□□□□□ -1.61
CDC42YLR229C HPF1Q05164 967 aa5.01□□□□□ -1.61
CDC42YLR229C SOG2Q08817 791 aa5.01□□□□□ -1.61
CDC42YLR229C CMR1Q12510 522 aaKnown RBP5.01□□□□□ -1.61
CDC42YLR229C SAC7P17121 654 aa5□□□□□ -1.61
CDC42YLR229C TPM1P17536 199 aaKnown RBP5□□□□□ -1.61
CDC42YLR229C RAD27P26793 382 aa5□□□□□ -1.61
CDC42YLR229C RIM11P38615 370 aa5□□□□□ -1.61
CDC42YLR229C LSB6P42951 607 aa5□□□□□ -1.61
CDC42YLR229C SOK2P53438 785 aaPredicted RBP5□□□□□ -1.61
CDC42YLR229C UBP16Q02863 499 aa5□□□□□ -1.61
CDC42YLR229C YPL109CQ02981 657 aa5□□□□□ -1.61
CDC42YLR229C SPO71Q03868 1245 aa5□□□□□ -1.61
CDC42YLR229C VPS20Q04272 221 aa5□□□□□ -1.61
CDC42YLR229C BUG1Q12191 341 aa5□□□□□ -1.61
CDC42YLR229C YLL054CQ12244 843 aa5□□□□□ -1.61
CDC42YLR229C NHA1Q99271 985 aa5□□□□□ -1.61
CDC42YLR229C ADR1P07248 1323 aa4.99□□□□□ -1.61
CDC42YLR229C UGA4P32837 571 aa4.99□□□□□ -1.61
CDC42YLR229C PBY1P38254 753 aa4.99□□□□□ -1.61
CDC42YLR229C OSH3P38713 996 aaKnown RBP4.99□□□□□ -1.61
CDC42YLR229C NPA3P47122 385 aa4.99□□□□□ -1.61
CDC42YLR229C PIB2P53191 635 aa4.99□□□□□ -1.61
CDC42YLR229C YNR014WP53719 212 aa4.99□□□□□ -1.61
CDC42YLR229C YNL193WP53870 558 aa4.99□□□□□ -1.61
CDC42YLR229C RAT1Q02792 1006 aaKnown RBP4.99□□□□□ -1.61
CDC42YLR229C MRL1Q06815 381 aa4.99□□□□□ -1.61
CDC42YLR229C YDL176WQ12027 708 aa4.99□□□□□ -1.61
CDC42YLR229C LTV1P34078 463 aa4.98□□□□□ -1.61
CDC42YLR229C PGM2P37012 569 aaKnown RBP4.98□□□□□ -1.61
CDC42YLR229C VAC8P39968 578 aa4.98□□□□□ -1.61
CDC42YLR229C GIP2P40036 548 aa4.98□□□□□ -1.61
CDC42YLR229C SPO22P40511 975 aa4.98□□□□□ -1.61
CDC42YLR229C PEX14P53112 341 aa4.98□□□□□ -1.61
CDC42YLR229C YNR065CP53751 1116 aa4.98□□□□□ -1.61
CDC42YLR229C VPS60Q03390 229 aa4.98□□□□□ -1.61
CDC42YLR229C RPN7Q06103 429 aaKnown RBP4.98□□□□□ -1.61
CDC42YLR229C TOS4Q06266 489 aa4.98□□□□□ -1.61
CDC42YLR229C DIB1Q06819 143 aaPredicted RBP4.98□□□□□ -1.61
CDC42YLR229C PIN2Q12057 282 aa4.98□□□□□ -1.61
CDC42YLR229C WRS1Q12109 432 aaKnown RBP4.98□□□□□ -1.61
CDC42YLR229C RRI2Q12348 645 aa4.98□□□□□ -1.61
CDC42YLR229C MRP10O75012 95 aa4.97□□□□□ -1.61
CDC42YLR229C PIF1P07271 859 aa4.97□□□□□ -1.61
CDC42YLR229C OPI1P21957 404 aa4.97□□□□□ -1.61
CDC42YLR229C MSH3P25336 1018 aa4.97□□□□□ -1.61
CDC42YLR229C DUR3P33413 735 aa4.97□□□□□ -1.61
CDC42YLR229C TFA2P36145 328 aa4.97□□□□□ -1.61
CDC42YLR229C MRPL10P36520 322 aa4.97□□□□□ -1.61
CDC42YLR229C PEX28P38848 579 aa4.97□□□□□ -1.61
CDC42YLR229C UTP22P53254 1237 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 22.7 ms