RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C RSM24Q03976 319 aa5.41□□□□□ -1.54
ATG38YLR211C CDC6P09119 513 aa5.4□□□□□ -1.54
ATG38YLR211C PRE10P21242 288 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
ATG38YLR211C APL1P27351 700 aa5.4□□□□□ -1.54
ATG38YLR211C GEM1P39722 662 aa5.4□□□□□ -1.54
ATG38YLR211C HFM1P51979 1187 aa5.4□□□□□ -1.54
ATG38YLR211C SIZ1Q04195 904 aa5.4□□□□□ -1.54
ATG38YLR211C XYL2Q07993 356 aa5.4□□□□□ -1.54
ATG38YLR211C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.4□□□□□ -1.54not detected
ATG38YLR211C PIN2Q12057 282 aa5.4□□□□□ -1.54
ATG38YLR211C YKL107WP34251 309 aa5.39□□□□□ -1.55
ATG38YLR211C SPT20P50875 604 aa5.39□□□□□ -1.55
ATG38YLR211C YKL222CP35995 705 aa5.38□□□□□ -1.55
ATG38YLR211C MSC2Q03455 724 aa5.38□□□□□ -1.55
ATG38YLR211C HRQ1Q05549 1077 aa5.38□□□□□ -1.55
ATG38YLR211C JIP5Q06214 492 aaPredicted RBP5.38□□□□□ -1.55
ATG38YLR211C KIN2P13186 1147 aaKnown RBP5.37□□□□□ -1.55
ATG38YLR211C YKL069WP36088 180 aa5.37□□□□□ -1.55
ATG38YLR211C CLU1Q03690 1277 aaKnown RBP5.37□□□□□ -1.55
ATG38YLR211C SPO20Q04359 397 aa5.37□□□□□ -1.55
ATG38YLR211C CDC20P26309 610 aa5.36□□□□□ -1.55
ATG38YLR211C MBP1P39678 833 aa5.36□□□□□ -1.55
ATG38YLR211C RRT14P40470 206 aa5.36□□□□□ -1.55
ATG38YLR211C YOR352WQ08816 343 aa5.36□□□□□ -1.55
ATG38YLR211C CLN2P20438 545 aa5.35□□□□□ -1.55
ATG38YLR211C NPP2P39997 493 aa5.35□□□□□ -1.55
ATG38YLR211C MAD1P40957 749 aa5.35□□□□□ -1.55
ATG38YLR211C GCV2P49095 1034 aa5.35□□□□□ -1.55
ATG38YLR211C YLR358CO13565 187 aa5.34□□□□□ -1.55
ATG38YLR211C AGP1P25376 633 aa5.34□□□□□ -1.55
ATG38YLR211C CTS1P29029 562 aa5.34□□□□□ -1.55
ATG38YLR211C DOM34P33309 386 aa5.34□□□□□ -1.55
ATG38YLR211C GTF1P53260 183 aaPredicted RBP5.34□□□□□ -1.55
ATG38YLR211C VPS62P53285 467 aa5.34□□□□□ -1.55
ATG38YLR211C SVF1Q05515 481 aa5.34□□□□□ -1.55
ATG38YLR211C OPI10Q08202 246 aa5.34□□□□□ -1.55
ATG38YLR211C GPB1Q08886 897 aa5.34□□□□□ -1.55
ATG38YLR211C PRI2P20457 528 aa5.33□□□□□ -1.56
ATG38YLR211C PIN4P34217 668 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
ATG38YLR211C CWC24P53769 259 aa5.33□□□□□ -1.56
ATG38YLR211C ACK1Q07622 623 aaPredicted RBP5.33□□□□□ -1.56
ATG38YLR211C MDM38Q08179 573 aa5.33□□□□□ -1.56
ATG38YLR211C FAL1Q12099 399 aaKnown RBP5.33□□□□□ -1.56
ATG38YLR211C SBA1P28707 216 aaKnown RBP5.32□□□□□ -1.56
ATG38YLR211C LST4P34239 828 aa5.32□□□□□ -1.56
ATG38YLR211C VBA5P36172 582 aa5.32□□□□□ -1.56
ATG38YLR211C SHM2P37291 469 aaKnown RBP5.32□□□□□ -1.56
ATG38YLR211C PAM1P37304 830 aaKnown RBP5.32□□□□□ -1.56
ATG38YLR211C GIC1P38785 314 aa5.32□□□□□ -1.56
ATG38YLR211C YAP1801P38856 637 aa5.32□□□□□ -1.56
ATG38YLR211C TAT2P38967 592 aa5.32□□□□□ -1.56
ATG38YLR211C YAP6Q03935 383 aa5.32□□□□□ -1.56
ATG38YLR211C RXT3Q07458 294 aa5.32□□□□□ -1.56
ATG38YLR211C HMI1Q12039 706 aa5.32□□□□□ -1.56
ATG38YLR211C THS1P04801 734 aaKnown RBP5.31□□□□□ -1.56
ATG38YLR211C EMC1P25574 760 aa5.31□□□□□ -1.56
ATG38YLR211C MND2P40577 368 aa5.31□□□□□ -1.56
ATG38YLR211C ALD6P54115 500 aaKnown RBP5.31□□□□□ -1.56
ATG38YLR211C VAC8P39968 578 aa5.3□□□□□ -1.56
ATG38YLR211C SRT1Q03175 343 aa5.3□□□□□ -1.56
ATG38YLR211C TPO1Q07824 586 aa5.3□□□□□ -1.56
ATG38YLR211C YLL058WQ12198 575 aa5.3□□□□□ -1.56
ATG38YLR211C CDC12P32468 407 aaKnown RBP5.29□□□□□ -1.56
ATG38YLR211C MPT5P39016 859 aaKnown RBP RIP-Chip data5.29□□□□□ -1.56not detected
ATG38YLR211C SNU71P53207 620 aaKnown RBP5.29□□□□□ -1.56
ATG38YLR211C PBP1P53297 722 aaKnown RBP5.29□□□□□ -1.56
ATG38YLR211C TMA10Q06177 86 aa5.29□□□□□ -1.56
ATG38YLR211C ADY3Q07732 790 aa5.29□□□□□ -1.56
ATG38YLR211C SAH1P39954 449 aaKnown RBP5.28□□□□□ -1.56
ATG38YLR211C ZRG8P40021 1076 aa5.28□□□□□ -1.56
ATG38YLR211C SFB2P53953 876 aa5.28□□□□□ -1.56
ATG38YLR211C SHE9Q04172 456 aa5.28□□□□□ -1.56
ATG38YLR211C YLR224WQ05947 369 aa5.28□□□□□ -1.56
ATG38YLR211C CDA1Q06702 301 aa5.28□□□□□ -1.56
ATG38YLR211C OSW2Q12202 724 aa5.28□□□□□ -1.56
ATG38YLR211C NAP1P25293 417 aaKnown RBP5.27□□□□□ -1.57
ATG38YLR211C STE5P32917 917 aa5.27□□□□□ -1.57
ATG38YLR211C ECM21P38167 1117 aaKnown RBP5.27□□□□□ -1.57
ATG38YLR211C GUS1P46655 708 aaKnown RBP RIP-Chip data5.27□□□□□ -1.57not detected
ATG38YLR211C FUN30P31380 1131 aa5.26□□□□□ -1.57
ATG38YLR211C SRP101P32916 621 aa5.26□□□□□ -1.57
ATG38YLR211C SPF1P39986 1215 aaKnown RBP5.26□□□□□ -1.57
ATG38YLR211C MET12P46151 657 aa5.26□□□□□ -1.57
ATG38YLR211C DUS3Q06053 668 aaKnown RBP5.26□□□□□ -1.57
ATG38YLR211C ENA1P13587 1091 aa5.25□□□□□ -1.57
ATG38YLR211C NPP1P25353 742 aa5.25□□□□□ -1.57
ATG38YLR211C AFR1P33304 620 aa5.25□□□□□ -1.57
ATG38YLR211C MCM6P53091 1017 aaKnown RBP5.25□□□□□ -1.57
ATG38YLR211C ENA2Q01896 1091 aa5.25□□□□□ -1.57
ATG38YLR211C ENA5Q12691 1091 aa5.25□□□□□ -1.57
ATG38YLR211C POA1P38218 177 aa5.24□□□□□ -1.57
ATG38YLR211C PLB1P39105 664 aa5.24□□□□□ -1.57
ATG38YLR211C SNF7P39929 240 aaKnown RBP5.24□□□□□ -1.57
ATG38YLR211C CHA4P43634 648 aa5.24□□□□□ -1.57
ATG38YLR211C YGR012WP53206 393 aa5.24□□□□□ -1.57
ATG38YLR211C NOP12Q08208 459 aaKnown RBP5.24□□□□□ -1.57
ATG38YLR211C HIS5P07172 385 aa5.23□□□□□ -1.57
ATG38YLR211C STE11P23561 717 aa5.23□□□□□ -1.57
ATG38YLR211C MNN10P50108 393 aaKnown RBP5.23□□□□□ -1.57
ATG38YLR211C SRP1Q02821 542 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms