RNA–Protein interactions for RNA: YLR208W

SEC13, Transcript of Structural component of 3 distinct complexes, yeastyeast

Gene SEC13, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC13YLR208W SWI6P09959 803 aa6.33□□□□□ -1.4
SEC13YLR208W SUI2P20459 304 aaKnown RBP6.33□□□□□ -1.4
SEC13YLR208W RPA135P22138 1203 aaKnown RBP6.33□□□□□ -1.4
SEC13YLR208W DPB3P27344 201 aa6.33□□□□□ -1.4
SEC13YLR208W ISW1P38144 1129 aa6.33□□□□□ -1.4
SEC13YLR208W REG2P38232 338 aa6.33□□□□□ -1.4
SEC13YLR208W CTR1P49573 406 aa6.33□□□□□ -1.4
SEC13YLR208W MET13P53128 600 aa6.33□□□□□ -1.4
SEC13YLR208W HST2P53686 357 aa6.33□□□□□ -1.4
SEC13YLR208W STB3Q12427 513 aa6.33□□□□□ -1.4
SEC13YLR208W SNA3P14359 133 aa6.32□□□□□ -1.4
SEC13YLR208W SPT5P27692 1063 aaKnown RBP6.32□□□□□ -1.4
SEC13YLR208W MPE1P35728 441 aaKnown RBP6.32□□□□□ -1.4
SEC13YLR208W VID27P40157 782 aa6.32□□□□□ -1.4
SEC13YLR208W YMR147WP40218 223 aaKnown RBP6.32□□□□□ -1.4
SEC13YLR208W YTA12P40341 825 aa6.32□□□□□ -1.4
SEC13YLR208W IOC3P43596 787 aa6.32□□□□□ -1.4
SEC13YLR208W RPN4Q03465 531 aa6.32□□□□□ -1.4
SEC13YLR208W UTP14Q04500 899 aaKnown RBP6.32□□□□□ -1.4
SEC13YLR208W KAR5Q04746 504 aa6.32□□□□□ -1.4
SEC13YLR208W MRX10Q05648 414 aa6.32□□□□□ -1.4
SEC13YLR208W MMP1Q12372 583 aa6.32□□□□□ -1.4
SEC13YLR208W NKP1Q12493 238 aa6.32□□□□□ -1.4
SEC13YLR208W ATG11Q12527 1178 aa6.32□□□□□ -1.4
SEC13YLR208W STI1P15705 589 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
SEC13YLR208W ACE2P21192 770 aa6.31□□□□□ -1.4
SEC13YLR208W SCJ1P25303 377 aa6.31□□□□□ -1.4
SEC13YLR208W PAT1P25644 796 aaKnown RBP6.31□□□□□ -1.4
SEC13YLR208W PPZ1P26570 692 aa6.31□□□□□ -1.4
SEC13YLR208W KTR4P38131 464 aa6.31□□□□□ -1.4
SEC13YLR208W STB5P38699 743 aa6.31□□□□□ -1.4
SEC13YLR208W IES1P43579 692 aa6.31□□□□□ -1.4
SEC13YLR208W YGR035CP53222 116 aa6.31□□□□□ -1.4
SEC13YLR208W ESF2P53743 316 aaKnown RBP6.31□□□□□ -1.4
SEC13YLR208W HEH2Q03281 663 aa6.31□□□□□ -1.4
SEC13YLR208W MSC2Q03455 724 aa6.31□□□□□ -1.4
SEC13YLR208W GUD1Q07729 489 aa6.31□□□□□ -1.4
SEC13YLR208W TY1A-DR4O74302 440 aa6.3□□□□□ -1.4
SEC13YLR208W TRL1P09880 827 aaKnown RBP6.3□□□□□ -1.4
SEC13YLR208W TY1A-HP0C2I4 478 aaKnown RBP6.3□□□□□ -1.4
SEC13YLR208W TY1A-AP0CX57 440 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-PR1P0CX58 440 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-ORP0CX59 440 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-PR2P0CX60 440 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-DR5P0CX65 440 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-ER2P0CX66 440 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-GR3P0CX67 440 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-LR1P0CX68 440 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-MR2P0CX69 440 aa6.3□□□□□ -1.4
SEC13YLR208W POL3P15436 1097 aa6.3□□□□□ -1.4
SEC13YLR208W SEC2P17065 759 aa6.3□□□□□ -1.4
SEC13YLR208W SLY41P22215 453 aa6.3□□□□□ -1.4
SEC13YLR208W PWP2P25635 923 aaKnown RBP6.3□□□□□ -1.4
SEC13YLR208W MRF1P30775 413 aaPredicted RBP6.3□□□□□ -1.4
SEC13YLR208W SYN8P31377 255 aa6.3□□□□□ -1.4
SEC13YLR208W PRO3P32263 286 aaKnown RBP6.3□□□□□ -1.4
SEC13YLR208W RTS1P38903 757 aa6.3□□□□□ -1.4
SEC13YLR208W IRC8P47046 822 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-JR2P47099 440 aa6.3□□□□□ -1.4
SEC13YLR208W PNG1Q02890 363 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-DR1Q03856 440 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-ML1Q04706 440 aaKnown RBP6.3□□□□□ -1.4
SEC13YLR208W ERF2Q06551 359 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-BRQ12217 440 aa6.3□□□□□ -1.4
SEC13YLR208W WHI5Q12416 295 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-NL2Q12470 440 aa6.3□□□□□ -1.4
SEC13YLR208W TY1A-GR2Q12485 440 aa6.3□□□□□ -1.4
SEC13YLR208W RAD61Q99359 647 aa6.3□□□□□ -1.4
SEC13YLR208W ENO2P00925 437 aaKnown RBP6.29□□□□□ -1.4
SEC13YLR208W ESS1P22696 170 aa6.29□□□□□ -1.4
SEC13YLR208W GCD7P32502 381 aaPredicted RBP6.29□□□□□ -1.4
SEC13YLR208W SPT16P32558 1035 aaKnown RBP6.29□□□□□ -1.4
SEC13YLR208W ALD5P40047 520 aaKnown RBP6.29□□□□□ -1.4
SEC13YLR208W MDJ2P42834 146 aa6.29□□□□□ -1.4
SEC13YLR208W SPO74P45819 413 aa6.29□□□□□ -1.4
SEC13YLR208W RPS7BP48164 190 aaKnown RBP6.29□□□□□ -1.4
SEC13YLR208W PKH3Q03306 898 aaPredicted RBP6.29□□□□□ -1.4
SEC13YLR208W COG4Q06096 861 aa6.29□□□□□ -1.4
SEC13YLR208W SUE1Q06524 206 aa6.29□□□□□ -1.4
SEC13YLR208W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.28□□□□□ -1.4not detected
SEC13YLR208W VPS24P36095 224 aaKnown RBP6.28□□□□□ -1.4
SEC13YLR208W MET1P36150 593 aa6.28□□□□□ -1.4
SEC13YLR208W NDT80P38830 627 aa6.28□□□□□ -1.4
SEC13YLR208W OPT1P40897 799 aa6.28□□□□□ -1.4
SEC13YLR208W MAD1P40957 749 aa6.28□□□□□ -1.4
SEC13YLR208W HUL4P40985 892 aa6.28□□□□□ -1.4
SEC13YLR208W BDP1P46678 594 aa6.28□□□□□ -1.4
SEC13YLR208W YGL242CP53066 181 aa6.28□□□□□ -1.4
SEC13YLR208W VMS1Q04311 632 aaKnown RBP6.28□□□□□ -1.4
SEC13YLR208W LCD1Q04377 747 aa6.28□□□□□ -1.4
SEC13YLR208W IRC10Q08118 586 aa6.28□□□□□ -1.4
SEC13YLR208W RKM4Q12504 494 aa6.28□□□□□ -1.4
SEC13YLR208W CHO2P05374 869 aaKnown RBP6.27□□□□□ -1.41
SEC13YLR208W RPL40AP0CH08 128 aaKnown RBP6.27□□□□□ -1.41
SEC13YLR208W RPL40BP0CH09 128 aaKnown RBP6.27□□□□□ -1.41
SEC13YLR208W COQ1P18900 473 aa6.27□□□□□ -1.41
SEC13YLR208W SEC6P32844 805 aa6.27□□□□□ -1.41
SEC13YLR208W MNN1P39106 762 aa6.27□□□□□ -1.41
SEC13YLR208W VPS8P39702 1274 aa6.27□□□□□ -1.41
SEC13YLR208W FAF1P40546 346 aaPredicted RBP6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 41.6 ms