RNA–Protein interactions for RNA: YLR115W

CFT2, Transcript of Subunit of the mRNA cleavage and polyadenlylation factor (CPF), yeastyeast

Gene CFT2, Length 2,580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CFT2YLR115W ROT1Q03691 256 aa2.81□□□□□ -1.96
CFT2YLR115W GAL10P04397 699 aa2.81□□□□□ -1.96
CFT2YLR115W DOM34P33309 386 aa2.81□□□□□ -1.96
CFT2YLR115W MSC2Q03455 724 aa2.81□□□□□ -1.96
CFT2YLR115W INO1P11986 533 aa2.8□□□□□ -1.96
CFT2YLR115W YKL151CP36059 337 aa2.8□□□□□ -1.96
CFT2YLR115W GEM1P39722 662 aa2.8□□□□□ -1.96
CFT2YLR115W YLR225CQ05948 407 aaKnown RBP2.8□□□□□ -1.96
CFT2YLR115W RKM4Q12504 494 aa2.8□□□□□ -1.96
CFT2YLR115W TCB3Q03640 1545 aaKnown RBP2.8□□□□□ -1.96
CFT2YLR115W CMP2P14747 604 aa2.8□□□□□ -1.96
CFT2YLR115W YGL176CP46945 554 aa2.8□□□□□ -1.96
CFT2YLR115W CLU1Q03690 1277 aaKnown RBP2.8□□□□□ -1.96
CFT2YLR115W RSM24Q03976 319 aa2.8□□□□□ -1.96
CFT2YLR115W PIN2Q12057 282 aa2.8□□□□□ -1.96
CFT2YLR115W DNF1P32660 1571 aa2.79□□□□□ -1.96
CFT2YLR115W NAP1P25293 417 aaKnown RBP2.79□□□□□ -1.96
CFT2YLR115W RRT14P40470 206 aa2.79□□□□□ -1.96
CFT2YLR115W HFM1P51979 1187 aa2.79□□□□□ -1.96
CFT2YLR115W VPS16Q03308 798 aa2.79□□□□□ -1.96
CFT2YLR115W XYL2Q07993 356 aa2.79□□□□□ -1.96
CFT2YLR115W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
CFT2YLR115W YKL222CP35995 705 aa2.79□□□□□ -1.96
CFT2YLR115W GDE1Q02979 1223 aa2.79□□□□□ -1.96
CFT2YLR115W YLR358CO13565 187 aa2.78□□□□□ -1.96
CFT2YLR115W LST4P34239 828 aa2.78□□□□□ -1.96
CFT2YLR115W YKL107WP34251 309 aa2.78□□□□□ -1.96
CFT2YLR115W SPT20P50875 604 aa2.78□□□□□ -1.96
CFT2YLR115W SPP382Q06411 708 aaPredicted RBP2.78□□□□□ -1.96
CFT2YLR115W CDC20P26309 610 aa2.78□□□□□ -1.96
CFT2YLR115W APL1P27351 700 aa2.78□□□□□ -1.96
CFT2YLR115W ABD1P32783 436 aaPredicted RBP2.78□□□□□ -1.96
CFT2YLR115W TAT2P38967 592 aa2.78□□□□□ -1.96
CFT2YLR115W VPS62P53285 467 aa2.78□□□□□ -1.96
CFT2YLR115W HRQ1Q05549 1077 aa2.78□□□□□ -1.96
CFT2YLR115W IRC20Q06554 1556 aa2.78□□□□□ -1.96
CFT2YLR115W MYO2P19524 1574 aaKnown RBP2.77□□□□□ -1.97
CFT2YLR115W KIN2P13186 1147 aaKnown RBP2.77□□□□□ -1.97
CFT2YLR115W CTS1P29029 562 aa2.77□□□□□ -1.97
CFT2YLR115W YKL069WP36088 180 aa2.77□□□□□ -1.97
CFT2YLR115W HMI1Q12039 706 aa2.77□□□□□ -1.97
CFT2YLR115W NPP2P39997 493 aa2.77□□□□□ -1.97
CFT2YLR115W GCV2P49095 1034 aa2.77□□□□□ -1.97
CFT2YLR115W SPO20Q04359 397 aa2.77□□□□□ -1.97
CFT2YLR115W SVF1Q05515 481 aa2.77□□□□□ -1.97
CFT2YLR115W GPB1Q08886 897 aa2.77□□□□□ -1.97
CFT2YLR115W AGP1P25376 633 aa2.76□□□□□ -1.97
CFT2YLR115W ACK1Q07622 623 aaPredicted RBP2.76□□□□□ -1.97
CFT2YLR115W MDM38Q08179 573 aa2.76□□□□□ -1.97
CFT2YLR115W PIN4P34217 668 aaKnown RBP RIP-Chip data2.76□□□□□ -1.97not detected
CFT2YLR115W SHM2P37291 469 aaKnown RBP2.76□□□□□ -1.97
CFT2YLR115W YAP1801P38856 637 aa2.76□□□□□ -1.97
CFT2YLR115W MBP1P39678 833 aa2.76□□□□□ -1.97
CFT2YLR115W MND2P40577 368 aa2.76□□□□□ -1.97
CFT2YLR115W YAP6Q03935 383 aa2.76□□□□□ -1.97
CFT2YLR115W YLL058WQ12198 575 aa2.76□□□□□ -1.97
CFT2YLR115W THO2P53552 1597 aaKnown RBP2.76□□□□□ -1.97
CFT2YLR115W THS1P04801 734 aaKnown RBP2.75□□□□□ -1.97
CFT2YLR115W CLN2P20438 545 aa2.75□□□□□ -1.97
CFT2YLR115W GIC1P38785 314 aa2.75□□□□□ -1.97
CFT2YLR115W GTF1P53260 183 aaPredicted RBP2.75□□□□□ -1.97
CFT2YLR115W SRT1Q03175 343 aa2.75□□□□□ -1.97
CFT2YLR115W RXT3Q07458 294 aa2.75□□□□□ -1.97
CFT2YLR115W ADY3Q07732 790 aa2.75□□□□□ -1.97
CFT2YLR115W YOR352WQ08816 343 aa2.75□□□□□ -1.97
CFT2YLR115W EMC1P25574 760 aa2.75□□□□□ -1.97
CFT2YLR115W VBA5P36172 582 aa2.75□□□□□ -1.97
CFT2YLR115W JIP5Q06214 492 aaPredicted RBP2.75□□□□□ -1.97
CFT2YLR115W OPI10Q08202 246 aa2.75□□□□□ -1.97
CFT2YLR115W BNI1P41832 1953 aa2.75□□□□□ -1.97
CFT2YLR115W MDS3P53094 1487 aa2.74□□□□□ -1.97
CFT2YLR115W SBA1P28707 216 aaKnown RBP2.74□□□□□ -1.97
CFT2YLR115W PAM1P37304 830 aaKnown RBP2.74□□□□□ -1.97
CFT2YLR115W MPT5P39016 859 aaKnown RBP RIP-Chip data2.74□□□□□ -1.97not detected
CFT2YLR115W MET12P46151 657 aa2.74□□□□□ -1.97
CFT2YLR115W PBP1P53297 722 aaKnown RBP2.74□□□□□ -1.97
CFT2YLR115W SHE9Q04172 456 aa2.74□□□□□ -1.97
CFT2YLR115W YLR224WQ05947 369 aa2.74□□□□□ -1.97
CFT2YLR115W FAL1Q12099 399 aaKnown RBP2.74□□□□□ -1.97
CFT2YLR115W CDC12P32468 407 aaKnown RBP2.74□□□□□ -1.97
CFT2YLR115W ECM21P38167 1117 aaKnown RBP2.74□□□□□ -1.97
CFT2YLR115W MAD1P40957 749 aa2.74□□□□□ -1.97
CFT2YLR115W CDA1Q06702 301 aa2.74□□□□□ -1.97
CFT2YLR115W TPO1Q07824 586 aa2.74□□□□□ -1.97
CFT2YLR115W NOP12Q08208 459 aaKnown RBP2.74□□□□□ -1.97
CFT2YLR115W PEP1P32319 1579 aa2.73□□□□□ -1.97
CFT2YLR115W LTE1P07866 1435 aa2.73□□□□□ -1.97
CFT2YLR115W PRI2P20457 528 aa2.73□□□□□ -1.97
CFT2YLR115W STE11P23561 717 aa2.73□□□□□ -1.97
CFT2YLR115W STE5P32917 917 aa2.73□□□□□ -1.97
CFT2YLR115W AFR1P33304 620 aa2.73□□□□□ -1.97
CFT2YLR115W CHA4P43634 648 aa2.73□□□□□ -1.97
CFT2YLR115W TMA10Q06177 86 aa2.73□□□□□ -1.97
CFT2YLR115W URN1Q06525 465 aaKnown RBP2.73□□□□□ -1.97
CFT2YLR115W ZRG8P40021 1076 aa2.73□□□□□ -1.97
CFT2YLR115W FUN30P31380 1131 aa2.72□□□□□ -1.97
CFT2YLR115W VAC8P39968 578 aa2.72□□□□□ -1.97
CFT2YLR115W GUS1P46655 708 aaKnown RBP RIP-Chip data2.72□□□□□ -1.97not detected
CFT2YLR115W YGR012WP53206 393 aa2.72□□□□□ -1.97
CFT2YLR115W SFB2P53953 876 aa2.72□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 10.4 ms