RNA–Protein interactions for RNA: YKR072C

SIS2, Transcript of Negative regulatory subunit of protein phosphatase 1 (Ppz1p), yeast

Gene SIS2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIS2	YKR072C	PXA2	P34230	853 aa		5.72	□□□□□ -1.49
SIS2	YKR072C	GIP1	P38229	639 aa		5.72	□□□□□ -1.49
SIS2	YKR072C	OAF1	P39720	1047 aa	Predicted RBP	5.72	□□□□□ -1.49
SIS2	YKR072C	UTP7	P40055	554 aa	Known RBP	5.72	□□□□□ -1.49
SIS2	YKR072C	SAP155	P43612	1002 aa		5.72	□□□□□ -1.49
SIS2	YKR072C	ERO1	Q03103	563 aa		5.72	□□□□□ -1.49
SIS2	YKR072C	RMP1	Q12530	201 aa		5.72	□□□□□ -1.49
SIS2	YKR072C	CDC9	P04819	755 aa		5.71	□□□□□ -1.5
SIS2	YKR072C	STE6	P12866	1290 aa		5.71	□□□□□ -1.5
SIS2	YKR072C	PFK1	P16861	987 aa	Known RBP	5.71	□□□□□ -1.5
SIS2	YKR072C	SFL1	P20134	766 aa		5.71	□□□□□ -1.5
SIS2	YKR072C	MRF1	P30775	413 aa	Predicted RBP	5.71	□□□□□ -1.5
SIS2	YKR072C	VPH1	P32563	840 aa	Known RBP	5.71	□□□□□ -1.5
SIS2	YKR072C	SMY2	P32909	740 aa	Known RBP	5.71	□□□□□ -1.5
SIS2	YKR072C	DUR3	P33413	735 aa		5.71	□□□□□ -1.5
SIS2	YKR072C	RKM3	P38222	552 aa		5.71	□□□□□ -1.5
SIS2	YKR072C	GZF3	P42944	551 aa	Known RBP	5.71	□□□□□ -1.5
SIS2	YKR072C	YGL176C	P46945	554 aa		5.71	□□□□□ -1.5
SIS2	YKR072C	SGM1	P47166	707 aa		5.71	□□□□□ -1.5
SIS2	YKR072C	CAF120	P53836	1060 aa		5.71	□□□□□ -1.5
SIS2	YKR072C	NOG1	Q02892	647 aa	Known RBP	5.71	□□□□□ -1.5
SIS2	YKR072C	PRT1	P06103	763 aa	Known RBP	5.7	□□□□□ -1.5
SIS2	YKR072C	YBR284W	P38150	797 aa		5.7	□□□□□ -1.5
SIS2	YKR072C	PAN5	P38787	379 aa		5.7	□□□□□ -1.5
SIS2	YKR072C	VPS8	P39702	1274 aa		5.7	□□□□□ -1.5
SIS2	YKR072C	HOS2	P53096	452 aa	Predicted RBP	5.7	□□□□□ -1.5
SIS2	YKR072C	NPY1	P53164	384 aa		5.7	□□□□□ -1.5
SIS2	YKR072C	HOL1	P53389	586 aa		5.7	□□□□□ -1.5
SIS2	YKR072C	ROD1	Q02805	837 aa		5.7	□□□□□ -1.5
SIS2	YKR072C	TIF35	Q04067	274 aa	Known RBP	5.7	□□□□□ -1.5
SIS2	YKR072C	SPN1	Q06505	410 aa	Predicted RBP	5.7	□□□□□ -1.5
SIS2	YKR072C	SDH5	Q08230	162 aa		5.7	□□□□□ -1.5
SIS2	YKR072C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.69	□□□□□ -1.5	not detected
SIS2	YKR072C	MOD5	P07884	428 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	MSH3	P25336	1018 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	RER1	P25560	188 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	BRF1	P29056	596 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	MLF3	P32047	452 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	VMA8	P32610	256 aa	Known RBP	5.69	□□□□□ -1.5
SIS2	YKR072C	BEM3	P32873	1128 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	BSD2	P38356	321 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	EMP65	P40085	556 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	ALG2	P43636	503 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	GTR1	Q00582	310 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	SRP1	Q02821	542 aa	Known RBP	5.69	□□□□□ -1.5
SIS2	YKR072C	TRS130	Q03660	1102 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	IRC3	Q06683	689 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	GUD1	Q07729	489 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	SPO21	Q12411	609 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	TY1B-DR4	Q07793	1604 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	RAS1	P01119	309 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	MSS18	P08593	268 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	HEM13	P11353	328 aa	Known RBP	5.69	□□□□□ -1.5
SIS2	YKR072C	PYC2	P32327	1180 aa	Known RBP	5.69	□□□□□ -1.5
SIS2	YKR072C	KAP122	P32767	1081 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	BIT2	P38346	545 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	SHU2	P38957	223 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	CAJ1	P39101	391 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	MEP3	P53390	489 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	COG8	Q04632	607 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	YOR296W	Q08748	1289 aa		5.69	□□□□□ -1.5
SIS2	YKR072C	MRP7	P12687	371 aa		5.68	□□□□□ -1.5
SIS2	YKR072C	MSD1	P15179	658 aa	Known RBP	5.68	□□□□□ -1.5
SIS2	YKR072C	HEM12	P32347	362 aa	Predicted RBP	5.68	□□□□□ -1.5
SIS2	YKR072C	PET10	P36139	283 aa		5.68	□□□□□ -1.5
SIS2	YKR072C	PES4	P39684	611 aa		5.68	□□□□□ -1.5
SIS2	YKR072C	MNN11	P46985	422 aa	Known RBP	5.68	□□□□□ -1.5
SIS2	YKR072C	GPI8	P49018	411 aa		5.68	□□□□□ -1.5
SIS2	YKR072C	YGR016W	P53209	190 aa		5.68	□□□□□ -1.5
SIS2	YKR072C	YNL165W	P53891	406 aa		5.68	□□□□□ -1.5
SIS2	YKR072C	RAT1	Q02792	1006 aa	Known RBP	5.68	□□□□□ -1.5
SIS2	YKR072C	EMG1	Q06287	252 aa	Known RBP	5.68	□□□□□ -1.5
SIS2	YKR072C	SPT7	P35177	1332 aa		5.68	□□□□□ -1.5
SIS2	YKR072C	SSM4	P40318	1319 aa		5.68	□□□□□ -1.5
SIS2	YKR072C	YER152C	P10356	443 aa		5.67	□□□□□ -1.5
SIS2	YKR072C	KRR1	P25586	316 aa	Predicted RBP	5.67	□□□□□ -1.5
SIS2	YKR072C	SPT23	P35210	1082 aa		5.67	□□□□□ -1.5
SIS2	YKR072C	ABZ1	P37254	787 aa	Predicted RBP	5.67	□□□□□ -1.5
SIS2	YKR072C	NOP4	P37838	685 aa	Known RBP	5.67	□□□□□ -1.5
SIS2	YKR072C	BCD1	P38772	366 aa		5.67	□□□□□ -1.5
SIS2	YKR072C	DLD3	P39976	496 aa	Known RBP	5.67	□□□□□ -1.5
SIS2	YKR072C	QRI7	P43122	407 aa		5.67	□□□□□ -1.5
SIS2	YKR072C	CCT8	P47079	568 aa	Known RBP	5.67	□□□□□ -1.5
SIS2	YKR072C	SLD3	P53135	668 aa		5.67	□□□□□ -1.5
SIS2	YKR072C	HAP5	Q02516	242 aa		5.67	□□□□□ -1.5
SIS2	YKR072C	YPL066W	Q12194	479 aa		5.67	□□□□□ -1.5
SIS2	YKR072C	TRK1	P12685	1235 aa		5.66	□□□□□ -1.5
SIS2	YKR072C	SYP1	P25623	870 aa	Known RBP	5.66	□□□□□ -1.5
SIS2	YKR072C	AAR2	P32357	355 aa	Predicted RBP	5.66	□□□□□ -1.5
SIS2	YKR072C	SPC29	P33419	253 aa		5.66	□□□□□ -1.5
SIS2	YKR072C	STO1	P34160	861 aa	Known RBP	5.66	□□□□□ -1.5
SIS2	YKR072C	RDH54	P38086	958 aa		5.66	□□□□□ -1.5
SIS2	YKR072C	PSY4	P38193	441 aa		5.66	□□□□□ -1.5
SIS2	YKR072C	ERR3	P42222	437 aa		5.66	□□□□□ -1.5
SIS2	YKR072C	CTF4	Q01454	927 aa		5.66	□□□□□ -1.5
SIS2	YKR072C	PRP3	Q03338	469 aa	Predicted RBP	5.66	□□□□□ -1.5
SIS2	YKR072C	YDR306C	Q06640	478 aa		5.66	□□□□□ -1.5
SIS2	YKR072C	YPR071W	Q12346	211 aa		5.66	□□□□□ -1.5
SIS2	YKR072C	TY1B-A	O13527	1196 aa	Known RBP	5.66	□□□□□ -1.5
SIS2	YKR072C	PPH3	P32345	308 aa		5.66	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 18.6 ms