RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C PGA2P53903 129 aa13.03□□□□□ -0.32
YKR040CYKR040C EAR1Q03212 550 aa13.03□□□□□ -0.32
YKR040CYKR040C HXK1P04806 485 aaKnown RBP13.02□□□□□ -0.33
YKR040CYKR040C FRS2P15625 503 aaKnown RBP13.02□□□□□ -0.33
YKR040CYKR040C SMY2P32909 740 aaKnown RBP13.02□□□□□ -0.33
YKR040CYKR040C FYV10P40492 516 aa13.02□□□□□ -0.33
YKR040CYKR040C YGL081WP53156 320 aa13.02□□□□□ -0.33
YKR040CYKR040C CBK1P53894 756 aa13.02□□□□□ -0.33
YKR040CYKR040C SMC5Q08204 1093 aa13.02□□□□□ -0.33
YKR040CYKR040C DED1P06634 604 aaKnown RBP13.01□□□□□ -0.33
YKR040CYKR040C POT1P27796 417 aaKnown RBP RIP-Chip data13.01□□□□□ -0.33not detected
YKR040CYKR040C ULP2P40537 1034 aaPredicted RBP13.01□□□□□ -0.33
YKR040CYKR040C INP51P40559 946 aaKnown RBP13.01□□□□□ -0.33
YKR040CYKR040C ROG3P43602 733 aa13.01□□□□□ -0.33
YKR040CYKR040C ADY4Q05955 493 aa13.01□□□□□ -0.33
YKR040CYKR040C NCR1Q12200 1170 aa13.01□□□□□ -0.33
YKR040CYKR040C MOT1P32333 1867 aa13.01□□□□□ -0.33
YKR040CYKR040C HIP1P06775 603 aa13□□□□□ -0.33
YKR040CYKR040C PRP22P24384 1145 aaKnown RBP13□□□□□ -0.33
YKR040CYKR040C URA1P28272 314 aaPredicted RBP13□□□□□ -0.33
YKR040CYKR040C DID4P36108 232 aa13□□□□□ -0.33
YKR040CYKR040C TVP23P38962 199 aa13□□□□□ -0.33
YKR040CYKR040C RPN3P40016 523 aaKnown RBP13□□□□□ -0.33
YKR040CYKR040C YNL115CP53925 644 aa13□□□□□ -0.33
YKR040CYKR040C HRQ1Q05549 1077 aa13□□□□□ -0.33
YKR040CYKR040C FUS2Q05670 677 aa13□□□□□ -0.33
YKR040CYKR040C MMR1Q06324 491 aa13□□□□□ -0.33
YKR040CYKR040C MCM3P24279 971 aaKnown RBP12.99□□□□□ -0.33
YKR040CYKR040C MSS51P32335 436 aa12.99□□□□□ -0.33
YKR040CYKR040C ATG19P35193 415 aa12.99□□□□□ -0.33
YKR040CYKR040C ACF4P47129 309 aa12.99□□□□□ -0.33
YKR040CYKR040C UBA2P52488 636 aa12.99□□□□□ -0.33
YKR040CYKR040C CKA2P19454 339 aa12.98□□□□□ -0.33
YKR040CYKR040C EFT1P32324 842 aaKnown RBP12.98□□□□□ -0.33
YKR040CYKR040C PET10P36139 283 aa12.98□□□□□ -0.33
YKR040CYKR040C MSC7P38694 644 aa12.98□□□□□ -0.33
YKR040CYKR040C SIP3P38717 1229 aa12.98□□□□□ -0.33
YKR040CYKR040C PIH1P38768 344 aa12.98□□□□□ -0.33
YKR040CYKR040C EAF5P39995 279 aa12.98□□□□□ -0.33
YKR040CYKR040C DAK2P43550 591 aa12.98□□□□□ -0.33
YKR040CYKR040C SAD1P43589 448 aa12.98□□□□□ -0.33
YKR040CYKR040C CUS1Q02554 436 aaPredicted RBP12.98□□□□□ -0.33
YKR040CYKR040C YEL076C-AP0CX16 216 aa12.97□□□□□ -0.33
YKR040CYKR040C YLR464WP0CX17 216 aa12.97□□□□□ -0.33
YKR040CYKR040C GUA1P38625 525 aaKnown RBP12.97□□□□□ -0.33
YKR040CYKR040C YEL076CP39971 216 aa12.97□□□□□ -0.33
YKR040CYKR040C THI6P41835 540 aa12.97□□□□□ -0.33
YKR040CYKR040C FOL2P51601 243 aaKnown RBP12.97□□□□□ -0.33
YKR040CYKR040C ROD1Q02805 837 aa12.97□□□□□ -0.33
YKR040CYKR040C COQ9Q05779 260 aa12.97□□□□□ -0.33
YKR040CYKR040C TCP1P12612 559 aaKnown RBP12.96□□□□□ -0.33
YKR040CYKR040C NOC3Q07896 663 aaPredicted RBP12.96□□□□□ -0.33
YKR040CYKR040C FOB1O13329 566 aa12.95□□□□□ -0.34
YKR040CYKR040C HIS4P00815 799 aaKnown RBP12.95□□□□□ -0.34
YKR040CYKR040C MBR1P23493 339 aa12.95□□□□□ -0.34
YKR040CYKR040C RAM2P29703 316 aa12.95□□□□□ -0.34
YKR040CYKR040C BRL1P38770 471 aa12.95□□□□□ -0.34
YKR040CYKR040C NUP82P40368 713 aa12.95□□□□□ -0.34
YKR040CYKR040C NCS2P53923 493 aaPredicted RBP12.95□□□□□ -0.34
YKR040CYKR040C HIF1Q12373 385 aa12.95□□□□□ -0.34
YKR040CYKR040C AHC1Q12433 566 aa12.95□□□□□ -0.34
YKR040CYKR040C FUB1P25659 250 aa12.94□□□□□ -0.34
YKR040CYKR040C CUE3P53137 624 aaKnown RBP12.94□□□□□ -0.34
YKR040CYKR040C COG8Q04632 607 aa12.94□□□□□ -0.34
YKR040CYKR040C SWI6P09959 803 aa12.93□□□□□ -0.34
YKR040CYKR040C DBP5P20449 482 aaKnown RBP12.93□□□□□ -0.34
YKR040CYKR040C POA1P38218 177 aa12.93□□□□□ -0.34
YKR040CYKR040C BDH2P39713 417 aa12.93□□□□□ -0.34
YKR040CYKR040C JJJ3P47138 172 aa12.93□□□□□ -0.34
YKR040CYKR040C GUP1P53154 560 aa12.93□□□□□ -0.34
YKR040CYKR040C YVH1Q02256 364 aaKnown RBP12.93□□□□□ -0.34
YKR040CYKR040C HFI1Q12060 488 aa12.93□□□□□ -0.34
YKR040CYKR040C PFK1P16861 987 aaKnown RBP12.92□□□□□ -0.34
YKR040CYKR040C ISY1P21374 235 aaPredicted RBP12.92□□□□□ -0.34
YKR040CYKR040C CAD1P24813 409 aaKnown RBP12.92□□□□□ -0.34
YKR040CYKR040C SPO74P45819 413 aa12.92□□□□□ -0.34
YKR040CYKR040C PEX19Q07418 342 aa12.92□□□□□ -0.34
YKR040CYKR040C BMH1P29311 267 aaKnown RBP12.91□□□□□ -0.34
YKR040CYKR040C DRE2P36152 348 aa12.91□□□□□ -0.34
YKR040CYKR040C RFT1P38206 574 aaPredicted RBP12.91□□□□□ -0.34
YKR040CYKR040C JHD1P40034 492 aa12.91□□□□□ -0.34
YKR040CYKR040C VTC2P43585 828 aa12.91□□□□□ -0.34
YKR040CYKR040C AVT1P47082 602 aa12.91□□□□□ -0.34
YKR040CYKR040C MUK1Q02866 612 aa12.91□□□□□ -0.34
YKR040CYKR040C PSR2Q07949 397 aa12.91□□□□□ -0.34
YKR040CYKR040C LSP1Q12230 341 aaKnown RBP12.91□□□□□ -0.34
YKR040CYKR040C COT1P32798 439 aa12.9□□□□□ -0.34
YKR040CYKR040C YKR023WP36119 530 aaKnown RBP12.9□□□□□ -0.34
YKR040CYKR040C RSC8P43609 557 aaKnown RBP12.9□□□□□ -0.34
YKR040CYKR040C YGR035CP53222 116 aa12.9□□□□□ -0.34
YKR040CYKR040C HST1P53685 503 aa12.9□□□□□ -0.34
YKR040CYKR040C ARK1P53974 638 aa12.9□□□□□ -0.34
YKR040CYKR040C OSW2Q12202 724 aa12.9□□□□□ -0.34
YKR040CYKR040C WHI2P12611 486 aa12.89□□□□□ -0.35
YKR040CYKR040C PGM2P37012 569 aaKnown RBP12.89□□□□□ -0.35
YKR040CYKR040C RTT102P53330 157 aa12.89□□□□□ -0.35
YKR040CYKR040C CDC15P27636 974 aa12.88□□□□□ -0.35
YKR040CYKR040C ERC1P38767 581 aa12.88□□□□□ -0.35
YKR040CYKR040C HYR1P40581 163 aaKnown RBP12.88□□□□□ -0.35
YKR040CYKR040C TPO2P53283 614 aa12.88□□□□□ -0.35
Retrieved 100 of 5,963 RNA–protein pairs in 74.6 ms