RNA–Protein interactions for RNA: YKL018W

SWD2, Transcript of Subunit of the COMPASS (Set1C) histone H3K4 methyltransferase complex, yeast

Gene SWD2, Length 990 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWD2	YKL018W	MEF2	P39677	819 aa		5.26	□□□□□ -1.57
SWD2	YKL018W	GCN5	Q03330	439 aa		5.26	□□□□□ -1.57
SWD2	YKL018W	SVF1	Q05515	481 aa		5.26	□□□□□ -1.57
SWD2	YKL018W	AIM44	Q99299	758 aa		5.26	□□□□□ -1.57
SWD2	YKL018W	FAL1	Q12099	399 aa	Known RBP	5.25	□□□□□ -1.57
SWD2	YKL018W	BI4	P03879	638 aa		5.24	□□□□□ -1.57
SWD2	YKL018W	ACE2	P21192	770 aa		5.24	□□□□□ -1.57
SWD2	YKL018W	DBP2	P24783	546 aa	Known RBP	5.24	□□□□□ -1.57
SWD2	YKL018W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.24	□□□□□ -1.57	not detected
SWD2	YKL018W	PNT1	P38969	423 aa		5.24	□□□□□ -1.57
SWD2	YKL018W	RRT14	P40470	206 aa		5.24	□□□□□ -1.57
SWD2	YKL018W	FAA4	P47912	694 aa	Known RBP	5.24	□□□□□ -1.57
SWD2	YKL018W	GTF1	P53260	183 aa	Predicted RBP	5.24	□□□□□ -1.57
SWD2	YKL018W	ATG13	Q06628	738 aa		5.24	□□□□□ -1.57
SWD2	YKL018W	RXT3	Q07458	294 aa		5.24	□□□□□ -1.57
SWD2	YKL018W	SLA2	P33338	968 aa		5.23	□□□□□ -1.57
SWD2	YKL018W	FLR1	P38124	548 aa		5.23	□□□□□ -1.57
SWD2	YKL018W	YGR053C	P53234	283 aa		5.23	□□□□□ -1.57
SWD2	YKL018W	PLB2	Q03674	706 aa		5.23	□□□□□ -1.57
SWD2	YKL018W	ABD1	P32783	436 aa	Predicted RBP	5.22	□□□□□ -1.57
SWD2	YKL018W	GPB1	Q08886	897 aa		5.22	□□□□□ -1.57
SWD2	YKL018W	YPL066W	Q12194	479 aa		5.22	□□□□□ -1.57
SWD2	YKL018W	ENA1	P13587	1091 aa		5.21	□□□□□ -1.58
SWD2	YKL018W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	5.21	□□□□□ -1.58	not detected
SWD2	YKL018W	ENA2	Q01896	1091 aa		5.21	□□□□□ -1.58
SWD2	YKL018W	YDR132C	Q03900	495 aa		5.21	□□□□□ -1.58
SWD2	YKL018W	PIN2	Q12057	282 aa		5.21	□□□□□ -1.58
SWD2	YKL018W	OSW2	Q12202	724 aa		5.21	□□□□□ -1.58
SWD2	YKL018W	ENA5	Q12691	1091 aa		5.21	□□□□□ -1.58
SWD2	YKL018W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
SWD2	YKL018W	SAH1	P39954	449 aa	Known RBP	5.2	□□□□□ -1.58
SWD2	YKL018W	VPS16	Q03308	798 aa		5.2	□□□□□ -1.58
SWD2	YKL018W	MSC2	Q03455	724 aa		5.2	□□□□□ -1.58
SWD2	YKL018W	CLU1	Q03690	1277 aa	Known RBP	5.2	□□□□□ -1.58
SWD2	YKL018W	ESC2	Q06340	456 aa		5.2	□□□□□ -1.58
SWD2	YKL018W	RIB2	Q12362	591 aa	Known RBP	5.2	□□□□□ -1.58
SWD2	YKL018W	SRM1	P21827	482 aa		5.19	□□□□□ -1.58
SWD2	YKL018W	HFM1	P51979	1187 aa		5.19	□□□□□ -1.58
SWD2	YKL018W	SRP1	Q02821	542 aa	Known RBP	5.19	□□□□□ -1.58
SWD2	YKL018W	SIZ1	Q04195	904 aa		5.19	□□□□□ -1.58
SWD2	YKL018W	ACK1	Q07622	623 aa	Predicted RBP	5.19	□□□□□ -1.58
SWD2	YKL018W	PRI2	P20457	528 aa		5.18	□□□□□ -1.58
SWD2	YKL018W	SBA1	P28707	216 aa	Known RBP	5.18	□□□□□ -1.58
SWD2	YKL018W	TAT2	P38967	592 aa		5.18	□□□□□ -1.58
SWD2	YKL018W	VAC8	P39968	578 aa		5.18	□□□□□ -1.58
SWD2	YKL018W	ZRG8	P40021	1076 aa		5.18	□□□□□ -1.58
SWD2	YKL018W	SIP5	P40210	489 aa	Known RBP	5.18	□□□□□ -1.58
SWD2	YKL018W	DUS4	Q06063	367 aa		5.18	□□□□□ -1.58
SWD2	YKL018W	AGP1	P25376	633 aa		5.17	□□□□□ -1.58
SWD2	YKL018W	DOM34	P33309	386 aa		5.17	□□□□□ -1.58
SWD2	YKL018W	SHM2	P37291	469 aa	Known RBP	5.17	□□□□□ -1.58
SWD2	YKL018W	GCV2	P49095	1034 aa		5.17	□□□□□ -1.58
SWD2	YKL018W	CDC20	P26309	610 aa		5.16	□□□□□ -1.58
SWD2	YKL018W	PAM1	P37304	830 aa	Known RBP	5.16	□□□□□ -1.58
SWD2	YKL018W	POA1	P38218	177 aa		5.16	□□□□□ -1.58
SWD2	YKL018W	MBP1	P39678	833 aa		5.16	□□□□□ -1.58
SWD2	YKL018W	OPI10	Q08202	246 aa		5.16	□□□□□ -1.58
SWD2	YKL018W	TAD3	Q9URQ3	322 aa		5.16	□□□□□ -1.58
SWD2	YKL018W	RPP2A	P05319	106 aa	Known RBP	5.15	□□□□□ -1.59
SWD2	YKL018W	EMC1	P25574	760 aa		5.15	□□□□□ -1.59
SWD2	YKL018W	MCM6	P53091	1017 aa	Known RBP	5.15	□□□□□ -1.59
SWD2	YKL018W	YAP6	Q03935	383 aa		5.15	□□□□□ -1.59
SWD2	YKL018W	DUS3	Q06053	668 aa	Known RBP	5.15	□□□□□ -1.59
SWD2	YKL018W	TMA10	Q06177	86 aa		5.15	□□□□□ -1.59
SWD2	YKL018W	MDM38	Q08179	573 aa		5.15	□□□□□ -1.59
SWD2	YKL018W	YLL058W	Q12198	575 aa		5.15	□□□□□ -1.59
SWD2	YKL018W	CTS1	P29029	562 aa		5.14	□□□□□ -1.59
SWD2	YKL018W	VBA5	P36172	582 aa		5.14	□□□□□ -1.59
SWD2	YKL018W	YAP1801	P38856	637 aa		5.14	□□□□□ -1.59
SWD2	YKL018W	MND2	P40577	368 aa		5.14	□□□□□ -1.59
SWD2	YKL018W	PSP2	P50109	593 aa	Known RBP	5.14	□□□□□ -1.59
SWD2	YKL018W	ALD6	P54115	500 aa	Known RBP	5.14	□□□□□ -1.59
SWD2	YKL018W	ORC1	P54784	914 aa	Predicted RBP	5.14	□□□□□ -1.59
SWD2	YKL018W	HRQ1	Q05549	1077 aa		5.14	□□□□□ -1.59
SWD2	YKL018W	XYL2	Q07993	356 aa		5.14	□□□□□ -1.59
SWD2	YKL018W	PPH3	P32345	308 aa		5.13	□□□□□ -1.59
SWD2	YKL018W	MTC3	P53077	123 aa		5.13	□□□□□ -1.59
SWD2	YKL018W	SHE9	Q04172	456 aa		5.13	□□□□□ -1.59
SWD2	YKL018W	YPR196W	Q06595	470 aa		5.13	□□□□□ -1.59
SWD2	YKL018W	YDR306C	Q06640	478 aa		5.13	□□□□□ -1.59
SWD2	YKL018W	TPO1	Q07824	586 aa		5.13	□□□□□ -1.59
SWD2	YKL018W	TUB2	P02557	457 aa	Known RBP	5.12	□□□□□ -1.59
SWD2	YKL018W	FUN30	P31380	1131 aa		5.12	□□□□□ -1.59
SWD2	YKL018W	SRP101	P32916	621 aa		5.12	□□□□□ -1.59
SWD2	YKL018W	CCC2	P38995	1004 aa		5.12	□□□□□ -1.59
SWD2	YKL018W	MNN10	P50108	393 aa	Known RBP	5.12	□□□□□ -1.59
SWD2	YKL018W	YGR012W	P53206	393 aa		5.12	□□□□□ -1.59
SWD2	YKL018W	TPO2	P53283	614 aa		5.12	□□□□□ -1.59
SWD2	YKL018W	VPS62	P53285	467 aa		5.12	□□□□□ -1.59
SWD2	YKL018W	SRT1	Q03175	343 aa		5.12	□□□□□ -1.59
SWD2	YKL018W	YLR224W	Q05947	369 aa		5.12	□□□□□ -1.59
SWD2	YKL018W	NOP12	Q08208	459 aa	Known RBP	5.12	□□□□□ -1.59
SWD2	YKL018W	HMI1	Q12039	706 aa		5.12	□□□□□ -1.59
SWD2	YKL018W	MRP8	P35719	219 aa		5.11	□□□□□ -1.59
SWD2	YKL018W	YKL151C	P36059	337 aa		5.11	□□□□□ -1.59
SWD2	YKL018W	WRS1	Q12109	432 aa	Known RBP	5.11	□□□□□ -1.59
SWD2	YKL018W	CDC6	P09119	513 aa		5.1	□□□□□ -1.59
SWD2	YKL018W	HSF1	P10961	833 aa		5.1	□□□□□ -1.59
SWD2	YKL018W	STE11	P23561	717 aa		5.1	□□□□□ -1.59
SWD2	YKL018W	AAR2	P32357	355 aa	Predicted RBP	5.1	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms