RNA–Protein interactions for RNA: YIL148W

RPL40A, Transcript of Ubiquitin-ribosomal 60S subunit protein L40A fusion protein, yeastyeast

Gene RPL40A, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40AYIL148W RAD4P14736 754 aa3.29□□□□□ -1.88
RPL40AYIL148W AGP1P25376 633 aa3.29□□□□□ -1.88
RPL40AYIL148W DUT1P33317 147 aa3.29□□□□□ -1.88
RPL40AYIL148W QNS1P38795 714 aaKnown RBP3.29□□□□□ -1.88
RPL40AYIL148W SPF1P39986 1215 aaKnown RBP3.29□□□□□ -1.88
RPL40AYIL148W CNN1P43618 361 aa3.29□□□□□ -1.88
RPL40AYIL148W HNT2P49775 206 aa3.29□□□□□ -1.88
RPL40AYIL148W NSE3Q05541 303 aa3.29□□□□□ -1.88
RPL40AYIL148W YLR225CQ05948 407 aaKnown RBP3.29□□□□□ -1.88
RPL40AYIL148W RKM4Q12504 494 aa3.29□□□□□ -1.88
RPL40AYIL148W INO1P11986 533 aa3.28□□□□□ -1.88
RPL40AYIL148W PRP9P19736 530 aaKnown RBP3.28□□□□□ -1.88
RPL40AYIL148W DBP5P20449 482 aaKnown RBP3.28□□□□□ -1.88
RPL40AYIL148W HCM1P25364 564 aa3.28□□□□□ -1.88
RPL40AYIL148W SBA1P28707 216 aaKnown RBP3.28□□□□□ -1.88
RPL40AYIL148W MOT2P34909 587 aaKnown RBP3.28□□□□□ -1.88
RPL40AYIL148W ALG3P38179 458 aa3.28□□□□□ -1.88
RPL40AYIL148W RGD1P38339 666 aa3.28□□□□□ -1.88
RPL40AYIL148W IRR1P40541 1150 aa3.28□□□□□ -1.88
RPL40AYIL148W HUL4P40985 892 aa3.28□□□□□ -1.88
RPL40AYIL148W ENV11P53246 860 aa3.28□□□□□ -1.88
RPL40AYIL148W YGR125WP53273 1036 aa3.28□□□□□ -1.88
RPL40AYIL148W EEB1Q02891 456 aa3.28□□□□□ -1.88
RPL40AYIL148W SHE9Q04172 456 aa3.28□□□□□ -1.88
RPL40AYIL148W NBA1Q08229 501 aaKnown RBP3.28□□□□□ -1.88
RPL40AYIL148W SPO21Q12411 609 aa3.28□□□□□ -1.88
RPL40AYIL148W HEM13P11353 328 aaKnown RBP3.27□□□□□ -1.89
RPL40AYIL148W HSP60P19882 572 aaKnown RBP3.27□□□□□ -1.89
RPL40AYIL148W PUF4P25339 888 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
RPL40AYIL148W ARE1P25628 610 aa3.27□□□□□ -1.89
RPL40AYIL148W ABD1P32783 436 aaPredicted RBP3.27□□□□□ -1.89
RPL40AYIL148W DOM34P33309 386 aa3.27□□□□□ -1.89
RPL40AYIL148W LST4P34239 828 aa3.27□□□□□ -1.89
RPL40AYIL148W PBY1P38254 753 aa3.27□□□□□ -1.89
RPL40AYIL148W NMD2P38798 1089 aaKnown RBP3.27□□□□□ -1.89
RPL40AYIL148W HXT13P39924 564 aa3.27□□□□□ -1.89
RPL40AYIL148W YGL176CP46945 554 aa3.27□□□□□ -1.89
RPL40AYIL148W GNP1P48813 663 aa3.27□□□□□ -1.89
RPL40AYIL148W ERP6P53198 216 aa3.27□□□□□ -1.89
RPL40AYIL148W HXT17P53631 564 aa3.27□□□□□ -1.89
RPL40AYIL148W HXT15P54854 567 aa3.27□□□□□ -1.89
RPL40AYIL148W RAT1Q02792 1006 aaKnown RBP3.27□□□□□ -1.89
RPL40AYIL148W TIF35Q04067 274 aaKnown RBP3.27□□□□□ -1.89
RPL40AYIL148W EAF1Q06337 982 aa3.27□□□□□ -1.89
RPL40AYIL148W SPP382Q06411 708 aaPredicted RBP3.27□□□□□ -1.89
RPL40AYIL148W GAL11P19659 1081 aa3.26□□□□□ -1.89
RPL40AYIL148W MLS1P30952 554 aa3.26□□□□□ -1.89
RPL40AYIL148W CDC11P32458 415 aa3.26□□□□□ -1.89
RPL40AYIL148W VBA5P36172 582 aa3.26□□□□□ -1.89
RPL40AYIL148W BRN1P38170 754 aa3.26□□□□□ -1.89
RPL40AYIL148W YBR184WP38299 523 aa3.26□□□□□ -1.89
RPL40AYIL148W GGA2P38817 585 aaKnown RBP3.26□□□□□ -1.89
RPL40AYIL148W CHZ1P40019 153 aaPredicted RBP3.26□□□□□ -1.89
RPL40AYIL148W SEC26P41810 973 aaKnown RBP3.26□□□□□ -1.89
RPL40AYIL148W HUL5P53119 910 aa3.26□□□□□ -1.89
RPL40AYIL148W TMA10Q06177 86 aa3.26□□□□□ -1.89
RPL40AYIL148W BDF2Q07442 638 aa3.26□□□□□ -1.89
RPL40AYIL148W YPL260WQ08977 551 aa3.26□□□□□ -1.89
RPL40AYIL148W GNT1Q12096 491 aa3.26□□□□□ -1.89
RPL40AYIL148W NTO1Q12311 748 aa3.26□□□□□ -1.89
RPL40AYIL148W RAD53P22216 821 aa3.25□□□□□ -1.89
RPL40AYIL148W CDC20P26309 610 aa3.25□□□□□ -1.89
RPL40AYIL148W RRP14P36080 434 aaKnown RBP3.25□□□□□ -1.89
RPL40AYIL148W YKL069WP36088 180 aa3.25□□□□□ -1.89
RPL40AYIL148W IOC3P43596 787 aa3.25□□□□□ -1.89
RPL40AYIL148W PHO23P50947 330 aa3.25□□□□□ -1.89
RPL40AYIL148W MCM6P53091 1017 aaKnown RBP3.25□□□□□ -1.89
RPL40AYIL148W RNH70P53331 553 aa3.25□□□□□ -1.89
RPL40AYIL148W CTF4Q01454 927 aa3.25□□□□□ -1.89
RPL40AYIL148W RPN4Q03465 531 aa3.25□□□□□ -1.89
RPL40AYIL148W FLC1Q08967 793 aa3.25□□□□□ -1.89
RPL40AYIL148W COQ4O13525 335 aa3.24□□□□□ -1.89
RPL40AYIL148W GAL10P04397 699 aa3.24□□□□□ -1.89
RPL40AYIL148W MET6P05694 767 aaKnown RBP3.24□□□□□ -1.89
RPL40AYIL148W SRM1P21827 482 aa3.24□□□□□ -1.89
RPL40AYIL148W KIP1P28742 1111 aa3.24□□□□□ -1.89
RPL40AYIL148W PPH3P32345 308 aa3.24□□□□□ -1.89
RPL40AYIL148W AAR2P32357 355 aaPredicted RBP3.24□□□□□ -1.89
RPL40AYIL148W BAP2P38084 609 aa3.24□□□□□ -1.89
RPL40AYIL148W CHS7P38843 316 aa3.24□□□□□ -1.89
RPL40AYIL148W GPB2P39717 880 aa3.24□□□□□ -1.89
RPL40AYIL148W AIM21P40563 679 aa3.24□□□□□ -1.89
RPL40AYIL148W ALR2P43553 858 aa3.24□□□□□ -1.89
RPL40AYIL148W MNN10P50108 393 aaKnown RBP3.24□□□□□ -1.89
RPL40AYIL148W YDL124WQ07551 312 aaKnown RBP3.24□□□□□ -1.89
RPL40AYIL148W THS1P04801 734 aaKnown RBP3.23□□□□□ -1.89
RPL40AYIL148W CDC6P09119 513 aa3.23□□□□□ -1.89
RPL40AYIL148W PMI40P29952 429 aaKnown RBP3.23□□□□□ -1.89
RPL40AYIL148W AFG2P32794 780 aa3.23□□□□□ -1.89
RPL40AYIL148W PBP2P38151 413 aaKnown RBP RIP-Chip data3.23□□□□□ -1.89not detected
RPL40AYIL148W CCZ1P38273 704 aa3.23□□□□□ -1.89
RPL40AYIL148W FPR3P38911 411 aaKnown RBP3.23□□□□□ -1.89
RPL40AYIL148W SRP1Q02821 542 aaKnown RBP3.23□□□□□ -1.89
RPL40AYIL148W ESC2Q06340 456 aa3.23□□□□□ -1.89
RPL40AYIL148W ACK1Q07622 623 aaPredicted RBP3.23□□□□□ -1.89
RPL40AYIL148W RSB1Q08417 382 aa3.23□□□□□ -1.89
RPL40AYIL148W YLR125WQ12138 136 aa3.23□□□□□ -1.89
RPL40AYIL148W CIT1P00890 479 aa3.22□□□□□ -1.89
RPL40AYIL148W ADE8P04161 214 aa3.22□□□□□ -1.89
RPL40AYIL148W CMP2P14747 604 aa3.22□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms