RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W NPA3P47122 385 aa11.43□□□□□ -0.58
UBA4YHR111W SDA1P53313 767 aaKnown RBP11.43□□□□□ -0.58
UBA4YHR111W YLH47Q06493 454 aa11.43□□□□□ -0.58
UBA4YHR111W AHC1Q12433 566 aa11.43□□□□□ -0.58
UBA4YHR111W TUF1P02992 437 aaKnown RBP11.42□□□□□ -0.58
UBA4YHR111W PGI1P12709 554 aaKnown RBP11.42□□□□□ -0.58
UBA4YHR111W ALG1P16661 449 aa11.42□□□□□ -0.58
UBA4YHR111W YGR153WP48238 217 aa11.42□□□□□ -0.58
UBA4YHR111W PTC5Q12511 572 aa11.42□□□□□ -0.58
UBA4YHR111W SMC6Q12749 1114 aa11.42□□□□□ -0.58
UBA4YHR111W PRP22P24384 1145 aaKnown RBP11.41□□□□□ -0.58
UBA4YHR111W PRX1P34227 261 aaKnown RBP11.41□□□□□ -0.58
UBA4YHR111W BRL1P38770 471 aa11.41□□□□□ -0.58
UBA4YHR111W RTC4P53850 401 aa11.41□□□□□ -0.58
UBA4YHR111W PGA2P53903 129 aa11.41□□□□□ -0.58
UBA4YHR111W FAR11P53917 953 aa11.41□□□□□ -0.58
UBA4YHR111W CUS1Q02554 436 aaPredicted RBP11.41□□□□□ -0.58
UBA4YHR111W DED1P06634 604 aaKnown RBP11.4□□□□□ -0.58
UBA4YHR111W SRD1P09007 221 aa11.4□□□□□ -0.58
UBA4YHR111W MSS51P32335 436 aa11.4□□□□□ -0.58
UBA4YHR111W MAL33P38157 468 aa11.4□□□□□ -0.58
UBA4YHR111W SAD1P43589 448 aa11.4□□□□□ -0.58
UBA4YHR111W SMC5Q08204 1093 aa11.4□□□□□ -0.58
UBA4YHR111W NCR1Q12200 1170 aa11.4□□□□□ -0.58
UBA4YHR111W EFT1P32324 842 aaKnown RBP11.39□□□□□ -0.59
UBA4YHR111W GUA1P38625 525 aaKnown RBP11.39□□□□□ -0.59
UBA4YHR111W ROG3P43602 733 aa11.39□□□□□ -0.59
UBA4YHR111W PEX14P53112 341 aa11.39□□□□□ -0.59
UBA4YHR111W CAD1P24813 409 aaKnown RBP11.38□□□□□ -0.59
UBA4YHR111W DID4P36108 232 aa11.38□□□□□ -0.59
UBA4YHR111W POA1P38218 177 aa11.38□□□□□ -0.59
UBA4YHR111W FYV10P40492 516 aa11.38□□□□□ -0.59
UBA4YHR111W ULP2P40537 1034 aaPredicted RBP11.38□□□□□ -0.59
UBA4YHR111W ACF4P47129 309 aa11.38□□□□□ -0.59
UBA4YHR111W CBK1P53894 756 aa11.38□□□□□ -0.59
UBA4YHR111W FUS2Q05670 677 aa11.38□□□□□ -0.59
UBA4YHR111W SWI6P09959 803 aa11.37□□□□□ -0.59
UBA4YHR111W FRS2P15625 503 aaKnown RBP11.37□□□□□ -0.59
UBA4YHR111W FUB1P25659 250 aa11.37□□□□□ -0.59
UBA4YHR111W EAF5P39995 279 aa11.37□□□□□ -0.59
UBA4YHR111W JHD1P40034 492 aa11.37□□□□□ -0.59
UBA4YHR111W ROD1Q02805 837 aa11.37□□□□□ -0.59
UBA4YHR111W COQ9Q05779 260 aa11.37□□□□□ -0.59
UBA4YHR111W ADY4Q05955 493 aa11.37□□□□□ -0.59
UBA4YHR111W HXK1P04806 485 aaKnown RBP11.36□□□□□ -0.59
UBA4YHR111W BIK1P11709 440 aa11.36□□□□□ -0.59
UBA4YHR111W RGP1P16664 663 aa11.36□□□□□ -0.59
UBA4YHR111W RDS1P25611 832 aa11.36□□□□□ -0.59
UBA4YHR111W URA1P28272 314 aaPredicted RBP11.36□□□□□ -0.59
UBA4YHR111W RPN3P40016 523 aaKnown RBP11.36□□□□□ -0.59
UBA4YHR111W UBR2Q07963 1872 aa11.36□□□□□ -0.59
UBA4YHR111W RIF1P29539 1916 aa11.36□□□□□ -0.59
UBA4YHR111W YEL076C-AP0CX16 216 aa11.35□□□□□ -0.59
UBA4YHR111W YLR464WP0CX17 216 aa11.35□□□□□ -0.59
UBA4YHR111W TCP1P12612 559 aaKnown RBP11.35□□□□□ -0.59
UBA4YHR111W YGL015CP33199 130 aa11.35□□□□□ -0.59
UBA4YHR111W SIP3P38717 1229 aa11.35□□□□□ -0.59
UBA4YHR111W PIH1P38768 344 aa11.35□□□□□ -0.59
UBA4YHR111W YEL076CP39971 216 aa11.35□□□□□ -0.59
UBA4YHR111W RSC8P43609 557 aaKnown RBP11.35□□□□□ -0.59
UBA4YHR111W SPO74P45819 413 aa11.35□□□□□ -0.59
UBA4YHR111W UBA2P52488 636 aa11.35□□□□□ -0.59
UBA4YHR111W YGR035CP53222 116 aa11.35□□□□□ -0.59
UBA4YHR111W MMR1Q06324 491 aa11.35□□□□□ -0.59
UBA4YHR111W HIF1Q12373 385 aa11.35□□□□□ -0.59
UBA4YHR111W CKA2P19454 339 aa11.35□□□□□ -0.59
UBA4YHR111W MCM3P24279 971 aaKnown RBP11.35□□□□□ -0.59
UBA4YHR111W ATG19P35193 415 aa11.35□□□□□ -0.59
UBA4YHR111W PET10P36139 283 aa11.35□□□□□ -0.59
UBA4YHR111W DAK2P43550 591 aa11.35□□□□□ -0.59
UBA4YHR111W NOC3Q07896 663 aaPredicted RBP11.35□□□□□ -0.59
UBA4YHR111W DRE2P36152 348 aa11.34□□□□□ -0.59
UBA4YHR111W THI6P41835 540 aa11.34□□□□□ -0.59
UBA4YHR111W MCM6P53091 1017 aaKnown RBP11.34□□□□□ -0.59
UBA4YHR111W NCS2P53923 493 aaPredicted RBP11.34□□□□□ -0.59
UBA4YHR111W MUK1Q02866 612 aa11.34□□□□□ -0.59
UBA4YHR111W HFI1Q12060 488 aa11.34□□□□□ -0.59
UBA4YHR111W PCT1P13259 424 aa11.33□□□□□ -0.6
UBA4YHR111W NUP82P40368 713 aa11.33□□□□□ -0.6
UBA4YHR111W JJJ3P47138 172 aa11.33□□□□□ -0.6
UBA4YHR111W YGL081WP53156 320 aa11.33□□□□□ -0.6
UBA4YHR111W HRQ1Q05549 1077 aa11.33□□□□□ -0.6
UBA4YHR111W HIS4P00815 799 aaKnown RBP11.32□□□□□ -0.6
UBA4YHR111W RAM2P29703 316 aa11.32□□□□□ -0.6
UBA4YHR111W AVT1P47082 602 aa11.32□□□□□ -0.6
UBA4YHR111W FOB1O13329 566 aa11.31□□□□□ -0.6
UBA4YHR111W WHI2P12611 486 aa11.31□□□□□ -0.6
UBA4YHR111W PFK1P16861 987 aaKnown RBP11.31□□□□□ -0.6
UBA4YHR111W DBP5P20449 482 aaKnown RBP11.31□□□□□ -0.6
UBA4YHR111W MBR1P23493 339 aa11.31□□□□□ -0.6
UBA4YHR111W GUP1P53154 560 aa11.31□□□□□ -0.6
UBA4YHR111W ARK1P53974 638 aa11.31□□□□□ -0.6
UBA4YHR111W ISY1P21374 235 aaPredicted RBP11.3□□□□□ -0.6
UBA4YHR111W ERC1P38767 581 aa11.3□□□□□ -0.6
UBA4YHR111W GCV2P49095 1034 aa11.3□□□□□ -0.6
UBA4YHR111W CUE3P53137 624 aaKnown RBP11.3□□□□□ -0.6
UBA4YHR111W TPO2P53283 614 aa11.3□□□□□ -0.6
UBA4YHR111W SKY1Q03656 742 aa11.3□□□□□ -0.6
UBA4YHR111W COG8Q04632 607 aa11.3□□□□□ -0.6
UBA4YHR111W MAG2Q06436 670 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 181 ms