RNA–Protein interactions for RNA: YGR002C

SWC4, Transcript of Component of the Swr1p complex that incorporates Htz1p into chromatin, yeast

Gene SWC4, Length 1,431 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWC4	YGR002C	CDC53	Q12018	815 aa	Known RBP	4.27	□□□□□ -1.73
SWC4	YGR002C	ELM1	P32801	640 aa		4.26	□□□□□ -1.73
SWC4	YGR002C	SLA2	P33338	968 aa		4.26	□□□□□ -1.73
SWC4	YGR002C	HUL5	P53119	910 aa		4.26	□□□□□ -1.73
SWC4	YGR002C	DUS3	Q06053	668 aa	Known RBP	4.26	□□□□□ -1.73
SWC4	YGR002C	SRP40	P32583	406 aa	Predicted RBP	4.25	□□□□□ -1.73
SWC4	YGR002C	SEC26	P41810	973 aa	Known RBP	4.25	□□□□□ -1.73
SWC4	YGR002C	PFD1	P46988	109 aa		4.25	□□□□□ -1.73
SWC4	YGR002C	SNO2	P53823	222 aa		4.25	□□□□□ -1.73
SWC4	YGR002C	MRPL22	P53881	309 aa		4.25	□□□□□ -1.73
SWC4	YGR002C	NSE3	Q05541	303 aa		4.25	□□□□□ -1.73
SWC4	YGR002C	YDR306C	Q06640	478 aa		4.25	□□□□□ -1.73
SWC4	YGR002C	UBX5	Q06682	500 aa		4.25	□□□□□ -1.73
SWC4	YGR002C	BDF2	Q07442	638 aa		4.25	□□□□□ -1.73
SWC4	YGR002C	SPO75	Q07798	868 aa		4.25	□□□□□ -1.73
SWC4	YGR002C	FMP25	Q08023	583 aa		4.25	□□□□□ -1.73
SWC4	YGR002C	YDL177C	Q12257	170 aa		4.25	□□□□□ -1.73
SWC4	YGR002C	OSH2	Q12451	1283 aa		4.25	□□□□□ -1.73
SWC4	YGR002C	BI4	P03879	638 aa		4.24	□□□□□ -1.73
SWC4	YGR002C	PRP9	P19736	530 aa	Known RBP	4.24	□□□□□ -1.73
SWC4	YGR002C	RPL8B	P29453	256 aa	Known RBP	4.24	□□□□□ -1.73
SWC4	YGR002C	YKL091C	P33324	310 aa	Known RBP	4.24	□□□□□ -1.73
SWC4	YGR002C	GEM1	P39722	662 aa		4.24	□□□□□ -1.73
SWC4	YGR002C	NIT1	P40447	199 aa		4.24	□□□□□ -1.73
SWC4	YGR002C	ALR2	P43553	858 aa		4.24	□□□□□ -1.73
SWC4	YGR002C	YGR125W	P53273	1036 aa		4.24	□□□□□ -1.73
SWC4	YGR002C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
SWC4	YGR002C	EAF1	Q06337	982 aa		4.24	□□□□□ -1.73
SWC4	YGR002C	ARE1	P25628	610 aa		4.23	□□□□□ -1.73
SWC4	YGR002C	PPH3	P32345	308 aa		4.23	□□□□□ -1.73
SWC4	YGR002C	AAR2	P32357	355 aa	Predicted RBP	4.23	□□□□□ -1.73
SWC4	YGR002C	RFC5	P38251	354 aa		4.23	□□□□□ -1.73
SWC4	YGR002C	SAH1	P39954	449 aa	Known RBP	4.23	□□□□□ -1.73
SWC4	YGR002C	ENV11	P53246	860 aa		4.23	□□□□□ -1.73
SWC4	YGR002C	RSM24	Q03976	319 aa		4.23	□□□□□ -1.73
SWC4	YGR002C	HRQ1	Q05549	1077 aa		4.23	□□□□□ -1.73
SWC4	YGR002C	SVS1	Q12254	260 aa		4.23	□□□□□ -1.73
SWC4	YGR002C	YTA7	P40340	1379 aa		4.23	□□□□□ -1.73
SWC4	YGR002C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SWC4	YGR002C	HSP60	P19882	572 aa	Known RBP	4.22	□□□□□ -1.73
SWC4	YGR002C	CCC2	P38995	1004 aa		4.22	□□□□□ -1.73
SWC4	YGR002C	UBP5	P39944	805 aa		4.22	□□□□□ -1.73
SWC4	YGR002C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
SWC4	YGR002C	ERP6	P53198	216 aa		4.22	□□□□□ -1.73
SWC4	YGR002C	FLC1	Q08967	793 aa		4.22	□□□□□ -1.73
SWC4	YGR002C	YOR131C	Q12486	218 aa		4.22	□□□□□ -1.73
SWC4	YGR002C	CYC1	P00044	109 aa	Predicted RBP	4.21	□□□□□ -1.73
SWC4	YGR002C	THS1	P04801	734 aa	Known RBP	4.21	□□□□□ -1.73
SWC4	YGR002C	KIN2	P13186	1147 aa	Known RBP	4.21	□□□□□ -1.73
SWC4	YGR002C	APL1	P27351	700 aa		4.21	□□□□□ -1.73
SWC4	YGR002C	YKL151C	P36059	337 aa		4.21	□□□□□ -1.73
SWC4	YGR002C	AIM3	P38266	947 aa	Known RBP	4.21	□□□□□ -1.73
SWC4	YGR002C	YHR020W	P38708	688 aa	Known RBP	4.21	□□□□□ -1.73
SWC4	YGR002C	SRP1	Q02821	542 aa	Known RBP	4.21	□□□□□ -1.73
SWC4	YGR002C	CDA2	Q06703	312 aa		4.21	□□□□□ -1.73
SWC4	YGR002C	ACE2	P21192	770 aa		4.21	□□□□□ -1.74
SWC4	YGR002C	CDC12	P32468	407 aa	Known RBP	4.21	□□□□□ -1.74
SWC4	YGR002C	HBS1	P32769	611 aa	Known RBP	4.21	□□□□□ -1.74
SWC4	YGR002C	TSA1	P34760	196 aa	Known RBP	4.21	□□□□□ -1.74
SWC4	YGR002C	UTP8	P53276	713 aa	Known RBP	4.21	□□□□□ -1.74
SWC4	YGR002C	TPO2	P53283	614 aa		4.21	□□□□□ -1.74
SWC4	YGR002C	ORC1	P54784	914 aa	Predicted RBP	4.21	□□□□□ -1.74
SWC4	YGR002C	CIT1	P00890	479 aa		4.2	□□□□□ -1.74
SWC4	YGR002C	CMP2	P14747	604 aa		4.2	□□□□□ -1.74
SWC4	YGR002C	ABZ1	P37254	787 aa	Predicted RBP	4.2	□□□□□ -1.74
SWC4	YGR002C	YBR284W	P38150	797 aa		4.2	□□□□□ -1.74
SWC4	YGR002C	RSP5	P39940	809 aa	Known RBP	4.2	□□□□□ -1.74
SWC4	YGR002C	HFM1	P51979	1187 aa		4.2	□□□□□ -1.74
SWC4	YGR002C	ROT1	Q03691	256 aa		4.2	□□□□□ -1.74
SWC4	YGR002C	MDM38	Q08179	573 aa		4.2	□□□□□ -1.74
SWC4	YGR002C	RPS13	P05756	151 aa	Known RBP	4.19	□□□□□ -1.74
SWC4	YGR002C	YRO2	P38079	344 aa		4.19	□□□□□ -1.74
SWC4	YGR002C	ERT1	P38140	529 aa		4.19	□□□□□ -1.74
SWC4	YGR002C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SWC4	YGR002C	RRT14	P40470	206 aa		4.19	□□□□□ -1.74
SWC4	YGR002C	SGD1	Q06132	899 aa		4.19	□□□□□ -1.74
SWC4	YGR002C	ATG13	Q06628	738 aa		4.19	□□□□□ -1.74
SWC4	YGR002C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SWC4	YGR002C	GAL11	P19659	1081 aa		4.18	□□□□□ -1.74
SWC4	YGR002C	GIC1	P38785	314 aa		4.18	□□□□□ -1.74
SWC4	YGR002C	HUL4	P40985	892 aa		4.18	□□□□□ -1.74
SWC4	YGR002C	MTC3	P53077	123 aa		4.18	□□□□□ -1.74
SWC4	YGR002C	RIM8	P53179	542 aa		4.18	□□□□□ -1.74
SWC4	YGR002C	RPN4	Q03465	531 aa		4.18	□□□□□ -1.74
SWC4	YGR002C	YDL124W	Q07551	312 aa	Known RBP	4.18	□□□□□ -1.74
SWC4	YGR002C	XYL2	Q07993	356 aa		4.18	□□□□□ -1.74
SWC4	YGR002C	YPL277C	Q08989	487 aa		4.18	□□□□□ -1.74
SWC4	YGR002C	OSW2	Q12202	724 aa		4.18	□□□□□ -1.74
SWC4	YGR002C	YPR071W	Q12346	211 aa		4.18	□□□□□ -1.74
SWC4	YGR002C	RIB2	Q12362	591 aa	Known RBP	4.18	□□□□□ -1.74
SWC4	YGR002C	HBN1	Q96VH4	193 aa		4.18	□□□□□ -1.74
SWC4	YGR002C	ADE8	P04161	214 aa		4.17	□□□□□ -1.74
SWC4	YGR002C	GAL10	P04397	699 aa		4.17	□□□□□ -1.74
SWC4	YGR002C	TOP3	P13099	656 aa		4.17	□□□□□ -1.74
SWC4	YGR002C	PRP6	P19735	899 aa	Predicted RBP	4.17	□□□□□ -1.74
SWC4	YGR002C	NPP1	P25353	742 aa		4.17	□□□□□ -1.74
SWC4	YGR002C	CDC11	P32458	415 aa		4.17	□□□□□ -1.74
SWC4	YGR002C	TOD6	P34219	525 aa		4.17	□□□□□ -1.74
SWC4	YGR002C	LAM1	P38851	1228 aa		4.17	□□□□□ -1.74
SWC4	YGR002C	NPP2	P39997	493 aa		4.17	□□□□□ -1.74

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