RNA–Protein interactions for RNA: YER127W

LCP5, Essential protein involved in maturation of 18S rRNA, yeastyeast

Gene LCP5, Length 1,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCP5YER127W HIR3P47171 1648 aa9.02□□□□□ -0.97
LCP5YER127W MET6P05694 767 aaKnown RBP9.01□□□□□ -0.97
LCP5YER127W PHO8P11491 566 aa9.01□□□□□ -0.97
LCP5YER127W CHS2P14180 963 aa9.01□□□□□ -0.97
LCP5YER127W PPH3P32345 308 aa9.01□□□□□ -0.97
LCP5YER127W GEM1P39722 662 aa9.01□□□□□ -0.97
LCP5YER127W ACM1Q08981 209 aa9.01□□□□□ -0.97
LCP5YER127W THO2P53552 1597 aaKnown RBP9□□□□□ -0.97
LCP5YER127W ERR1P0CX10 437 aa9□□□□□ -0.97
LCP5YER127W ERR2P0CX11 437 aa9□□□□□ -0.97
LCP5YER127W CDC11P32458 415 aa9□□□□□ -0.97
LCP5YER127W TAF8Q03750 510 aa9□□□□□ -0.97
LCP5YER127W RCL1Q08096 367 aaPredicted RBP9□□□□□ -0.97
LCP5YER127W RRP14P36080 434 aaKnown RBP8.99□□□□□ -0.97
LCP5YER127W UGA2P38067 497 aa8.99□□□□□ -0.97
LCP5YER127W YBR284WP38150 797 aa8.99□□□□□ -0.97
LCP5YER127W SRP1Q02821 542 aaKnown RBP8.99□□□□□ -0.97
LCP5YER127W YLR125WQ12138 136 aa8.99□□□□□ -0.97
LCP5YER127W PRO1P32264 428 aa8.98□□□□□ -0.97
LCP5YER127W HBS1P32769 611 aaKnown RBP8.98□□□□□ -0.97
LCP5YER127W CCZ1P38273 704 aa8.98□□□□□ -0.97
LCP5YER127W SAH1P39954 449 aaKnown RBP8.98□□□□□ -0.97
LCP5YER127W GUS1P46655 708 aaKnown RBP RIP-Chip data8.98□□□□□ -0.97not detected
LCP5YER127W RSB1Q08417 382 aa8.98□□□□□ -0.97
LCP5YER127W NSI1Q12457 570 aa8.98□□□□□ -0.97
LCP5YER127W HBN1Q96VH4 193 aa8.98□□□□□ -0.97
LCP5YER127W SNF5P18480 905 aa8.97□□□□□ -0.97
LCP5YER127W MSB1P21339 1137 aaKnown RBP8.97□□□□□ -0.97
LCP5YER127W THI4P32318 326 aa8.97□□□□□ -0.97
LCP5YER127W PGM1P33401 570 aaKnown RBP8.97□□□□□ -0.97
LCP5YER127W ADE8P04161 214 aa8.96□□□□□ -0.98
LCP5YER127W SAM35P14693 329 aa8.96□□□□□ -0.98
LCP5YER127W MDL2P33311 773 aa8.96□□□□□ -0.98
LCP5YER127W SLA2P33338 968 aa8.96□□□□□ -0.98
LCP5YER127W KAE1P36132 386 aa8.96□□□□□ -0.98
LCP5YER127W RTA1P53047 317 aa8.96□□□□□ -0.98
LCP5YER127W YLR122CQ12312 125 aa8.96□□□□□ -0.98
LCP5YER127W YPR071WQ12346 211 aa8.96□□□□□ -0.98
LCP5YER127W THS1P04801 734 aaKnown RBP8.95□□□□□ -0.98
LCP5YER127W SPC42P36094 363 aa8.95□□□□□ -0.98
LCP5YER127W BET3P36149 193 aa8.95□□□□□ -0.98
LCP5YER127W YRO2P38079 344 aa8.95□□□□□ -0.98
LCP5YER127W BAP2P38084 609 aa8.95□□□□□ -0.98
LCP5YER127W PIK1P39104 1066 aa8.95□□□□□ -0.98
LCP5YER127W NPL3Q01560 414 aaKnown RBP RIP-Chip data8.95□□□□□ -0.98not detected
LCP5YER127W NBA1Q08229 501 aaKnown RBP8.95□□□□□ -0.98
LCP5YER127W TRE1Q08919 783 aa8.95□□□□□ -0.98
LCP5YER127W SRO9P25567 434 aaKnown RBP8.94□□□□□ -0.98
LCP5YER127W YGR130CP53278 816 aa8.94□□□□□ -0.98
LCP5YER127W TOM70P07213 617 aaKnown RBP8.93□□□□□ -0.98
LCP5YER127W SCT1P32784 759 aa8.93□□□□□ -0.98
LCP5YER127W OYE3P41816 400 aaPredicted RBP8.93□□□□□ -0.98
LCP5YER127W DOS2P54858 310 aa8.93□□□□□ -0.98
LCP5YER127W HRQ1Q05549 1077 aa8.93□□□□□ -0.98
LCP5YER127W TOP3P13099 656 aa8.92□□□□□ -0.98
LCP5YER127W DOM34P33309 386 aa8.92□□□□□ -0.98
LCP5YER127W GTS1P40956 396 aa8.92□□□□□ -0.98
LCP5YER127W RSC58Q07979 502 aa8.92□□□□□ -0.98
LCP5YER127W BI4P03879 638 aa8.91□□□□□ -0.98
LCP5YER127W AIM26P32858 118 aa8.91□□□□□ -0.98
LCP5YER127W YKL151CP36059 337 aa8.91□□□□□ -0.98
LCP5YER127W PTC7P38797 343 aa8.91□□□□□ -0.98
LCP5YER127W PEX7P39108 375 aa8.91□□□□□ -0.98
LCP5YER127W CDC12P32468 407 aaKnown RBP8.9□□□□□ -0.98
LCP5YER127W POB3Q04636 552 aaKnown RBP8.9□□□□□ -0.98
LCP5YER127W SIT1P39980 628 aa8.89□□□□□ -0.99
LCP5YER127W HSV2P50079 448 aaPredicted RBP8.89□□□□□ -0.99
LCP5YER127W SSY1Q03770 852 aa8.89□□□□□ -0.99
LCP5YER127W XRN1P22147 1528 aaKnown RBP8.89□□□□□ -0.99
LCP5YER127W MSD1P15179 658 aaKnown RBP8.88□□□□□ -0.99
LCP5YER127W MNN1P39106 762 aa8.88□□□□□ -0.99
LCP5YER127W MDS3P53094 1487 aa8.88□□□□□ -0.99
LCP5YER127W CYC7P00045 113 aa8.87□□□□□ -0.99
LCP5YER127W GCD1P09032 578 aaPredicted RBP8.87□□□□□ -0.99
LCP5YER127W PET10P36139 283 aa8.87□□□□□ -0.99
LCP5YER127W FPR3P38911 411 aaKnown RBP8.87□□□□□ -0.99
LCP5YER127W UBP6P43593 499 aaKnown RBP8.87□□□□□ -0.99
LCP5YER127W CCT8P47079 568 aaKnown RBP8.87□□□□□ -0.99
LCP5YER127W LCD1Q04377 747 aa8.87□□□□□ -0.99
LCP5YER127W SVS1Q12254 260 aa8.87□□□□□ -0.99
LCP5YER127W MDM38Q08179 573 aa8.86□□□□□ -0.99
LCP5YER127W SPS1P08458 490 aa8.85□□□□□ -0.99
LCP5YER127W ADP1P25371 1049 aa8.85□□□□□ -0.99
LCP5YER127W GDH3P39708 457 aa8.85□□□□□ -0.99
LCP5YER127W MAP1Q01662 387 aaKnown RBP RIP-Chip data8.85□□□□□ -0.99not detected
LCP5YER127W TRP3P00937 484 aa8.84□□□□□ -0.99
LCP5YER127W NPP1P25353 742 aa8.84□□□□□ -0.99
LCP5YER127W ERT1P38140 529 aa8.84□□□□□ -0.99
LCP5YER127W MTC3P53077 123 aa8.84□□□□□ -0.99
LCP5YER127W YLL058WQ12198 575 aa8.84□□□□□ -0.99
LCP5YER127W ACE2P21192 770 aa8.83□□□□□ -1
LCP5YER127W TOK1P40310 691 aa8.83□□□□□ -1
LCP5YER127W RRT14P40470 206 aa8.83□□□□□ -1
LCP5YER127W PHR1P05066 565 aaKnown RBP RIP-Chip data8.82□□□□□ -1not detected
LCP5YER127W MSH2P25847 964 aa8.82□□□□□ -1
LCP5YER127W AFR1P33304 620 aa8.82□□□□□ -1
LCP5YER127W REC104P33323 182 aa8.82□□□□□ -1
LCP5YER127W MTC5Q03897 1148 aa8.82□□□□□ -1
LCP5YER127W ATG13Q06628 738 aa8.82□□□□□ -1
LCP5YER127W OSW2Q12202 724 aa8.82□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms