RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C PRO1P32264 428 aa1.69□□□□□ -2.14
SWI4YER111C PGM2P37012 569 aaKnown RBP1.69□□□□□ -2.14
SWI4YER111C ARL1P38116 183 aaKnown RBP1.69□□□□□ -2.14
SWI4YER111C SIP5P40210 489 aaKnown RBP1.69□□□□□ -2.14
SWI4YER111C MPH1P40562 993 aa1.69□□□□□ -2.14
SWI4YER111C UBP6P43593 499 aaKnown RBP1.69□□□□□ -2.14
SWI4YER111C GCV1P48015 400 aa1.69□□□□□ -2.14
SWI4YER111C UME1Q03010 460 aa1.69□□□□□ -2.14
SWI4YER111C RKM2Q03942 479 aa1.69□□□□□ -2.14
SWI4YER111C YIG1Q08956 461 aa1.69□□□□□ -2.14
SWI4YER111C YDR461C-AQ2V2P7 80 aa1.69□□□□□ -2.14
SWI4YER111C PER1P25625 357 aa1.69□□□□□ -2.14
SWI4YER111C HBS1P32769 611 aaKnown RBP1.69□□□□□ -2.14
SWI4YER111C PET10P36139 283 aa1.69□□□□□ -2.14
SWI4YER111C BAP2P38084 609 aa1.69□□□□□ -2.14
SWI4YER111C ERT1P38140 529 aa1.69□□□□□ -2.14
SWI4YER111C DOT6P40059 670 aaKnown RBP1.69□□□□□ -2.14
SWI4YER111C TPM2P40414 161 aa1.69□□□□□ -2.14
SWI4YER111C YIR007WP40566 764 aa1.69□□□□□ -2.14
SWI4YER111C YJR120WP47157 116 aa1.69□□□□□ -2.14
SWI4YER111C TPP1Q03796 238 aa1.69□□□□□ -2.14
SWI4YER111C HFD1Q04458 532 aa1.69□□□□□ -2.14
SWI4YER111C SYT1Q06836 1226 aa1.69□□□□□ -2.14
SWI4YER111C RSB1Q08417 382 aa1.69□□□□□ -2.14
SWI4YER111C YPL260WQ08977 551 aa1.69□□□□□ -2.14
SWI4YER111C YOR223WQ12015 292 aa1.69□□□□□ -2.14
SWI4YER111C YOR093CQ12275 1648 aa1.68□□□□□ -2.14
SWI4YER111C CDC9P04819 755 aa1.68□□□□□ -2.14
SWI4YER111C YEF3P16521 1044 aaKnown RBP1.68□□□□□ -2.14
SWI4YER111C RFA1P22336 621 aaKnown RBP1.68□□□□□ -2.14
SWI4YER111C MEF1P25039 761 aa1.68□□□□□ -2.14
SWI4YER111C PRP19P32523 503 aaKnown RBP1.68□□□□□ -2.14
SWI4YER111C SAP190P36123 1033 aa1.68□□□□□ -2.14
SWI4YER111C GPT2P36148 743 aa1.68□□□□□ -2.14
SWI4YER111C NOP2P40991 618 aaKnown RBP1.68□□□□□ -2.14
SWI4YER111C ECM16Q04217 1267 aaKnown RBP1.68□□□□□ -2.14
SWI4YER111C YDR514CQ04408 483 aa1.68□□□□□ -2.14
SWI4YER111C RSA3Q05942 220 aaKnown RBP1.68□□□□□ -2.14
SWI4YER111C NHA1Q99271 985 aa1.68□□□□□ -2.14
SWI4YER111C RPL11AP0C0W9 174 aaKnown RBP1.68□□□□□ -2.14
SWI4YER111C PDC5P16467 563 aaKnown RBP1.68□□□□□ -2.14
SWI4YER111C NAR1P23503 491 aaKnown RBP1.68□□□□□ -2.14
SWI4YER111C MRC1P25588 1096 aa1.68□□□□□ -2.14
SWI4YER111C RRM3P38766 723 aa1.68□□□□□ -2.14
SWI4YER111C PNT1P38969 423 aa1.68□□□□□ -2.14
SWI4YER111C POL5P39985 1022 aaKnown RBP1.68□□□□□ -2.14
SWI4YER111C GUS1P46655 708 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
SWI4YER111C NIT3P49954 291 aa1.68□□□□□ -2.14
SWI4YER111C GUD1Q07729 489 aa1.68□□□□□ -2.14
SWI4YER111C HRK1Q08732 759 aaKnown RBP1.68□□□□□ -2.14
SWI4YER111C RPL11BQ3E757 174 aaPredicted RBP1.68□□□□□ -2.14
SWI4YER111C TMA7Q3E764 64 aaKnown RBP1.68□□□□□ -2.14
SWI4YER111C TY4B-PA0A0B7P3V8 1104 aa1.67□□□□□ -2.14
SWI4YER111C GPM1P00950 247 aaKnown RBP1.67□□□□□ -2.14
SWI4YER111C DBP2P24783 546 aaKnown RBP1.67□□□□□ -2.14
SWI4YER111C SEC6P32844 805 aa1.67□□□□□ -2.14
SWI4YER111C REC104P33323 182 aa1.67□□□□□ -2.14
SWI4YER111C TOK1P40310 691 aa1.67□□□□□ -2.14
SWI4YER111C YJL045WP47052 634 aa1.67□□□□□ -2.14
SWI4YER111C YNR014WP53719 212 aa1.67□□□□□ -2.14
SWI4YER111C SND1Q04007 877 aa1.67□□□□□ -2.14
SWI4YER111C GIS4Q04233 774 aa1.67□□□□□ -2.14
SWI4YER111C LCD1Q04377 747 aa1.67□□□□□ -2.14
SWI4YER111C LCB5Q06147 687 aaKnown RBP1.67□□□□□ -2.14
SWI4YER111C TY4A-HQ6Q5P6 413 aa1.67□□□□□ -2.14
SWI4YER111C COQ4O13525 335 aa1.67□□□□□ -2.14
SWI4YER111C KAR1P11927 433 aa1.67□□□□□ -2.14
SWI4YER111C NNK1P36003 928 aa1.67□□□□□ -2.14
SWI4YER111C RPN10P38886 268 aaKnown RBP1.67□□□□□ -2.14
SWI4YER111C MET13P53128 600 aa1.67□□□□□ -2.14
SWI4YER111C TNA1P53322 534 aa1.67□□□□□ -2.14
SWI4YER111C DSE4P53753 1117 aa1.67□□□□□ -2.14
SWI4YER111C VPS72Q03388 795 aa1.67□□□□□ -2.14
SWI4YER111C BUD21Q08492 214 aaPredicted RBP1.67□□□□□ -2.14
SWI4YER111C HAP1P0CE41 1502 aa1.67□□□□□ -2.14
SWI4YER111C RPS9AO13516 197 aaKnown RBP1.67□□□□□ -2.14
SWI4YER111C SFL1P20134 766 aa1.67□□□□□ -2.14
SWI4YER111C STO1P34160 861 aaKnown RBP1.67□□□□□ -2.14
SWI4YER111C PMC1P38929 1173 aaPredicted RBP1.67□□□□□ -2.14
SWI4YER111C BOI2P39969 1040 aa1.67□□□□□ -2.14
SWI4YER111C SHR5P41912 237 aa1.67□□□□□ -2.14
SWI4YER111C YFL054CP43549 646 aa1.67□□□□□ -2.14
SWI4YER111C LYS5P50113 272 aa1.67□□□□□ -2.14
SWI4YER111C AIM14P53109 570 aa1.67□□□□□ -2.14
SWI4YER111C DAM1P53267 343 aa1.67□□□□□ -2.14
SWI4YER111C HOS3Q02959 697 aaKnown RBP1.67□□□□□ -2.14
SWI4YER111C VMS1Q04311 632 aaKnown RBP1.67□□□□□ -2.14
SWI4YER111C MET7Q08645 548 aa1.67□□□□□ -2.14
SWI4YER111C TRE2Q08693 809 aa1.67□□□□□ -2.14
SWI4YER111C SLX4Q12098 748 aa1.67□□□□□ -2.14
SWI4YER111C MPD2Q99316 277 aa1.67□□□□□ -2.14
SWI4YER111C RPS4AP0CX35 261 aaKnown RBP1.66□□□□□ -2.14
SWI4YER111C RPS4BP0CX36 261 aaKnown RBP1.66□□□□□ -2.14
SWI4YER111C KNS1P32350 737 aaPredicted RBP1.66□□□□□ -2.14
SWI4YER111C CEP3P40969 608 aa1.66□□□□□ -2.14
SWI4YER111C ALY2P47029 1046 aa1.66□□□□□ -2.14
SWI4YER111C BFA1P47113 574 aa1.66□□□□□ -2.14
SWI4YER111C CCM1P48237 864 aaPredicted RBP1.66□□□□□ -2.14
SWI4YER111C PEX14P53112 341 aa1.66□□□□□ -2.14
SWI4YER111C VPS30Q02948 557 aa1.66□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms