RNA–Protein interactions for RNA: YER088C

DOT6, Transcript of Protein involved in rRNA and ribosome biogenesis, yeast

Gene DOT6, Length 2,013 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT6	YER088C	BPT1	P14772	1559 aa		3	□□□□□ -1.93
DOT6	YER088C	ACE2	P21192	770 aa		3	□□□□□ -1.93
DOT6	YER088C	AFR1	P33304	620 aa		3	□□□□□ -1.93
DOT6	YER088C	PBY1	P38254	753 aa		3	□□□□□ -1.93
DOT6	YER088C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	3	□□□□□ -1.93	not detected
DOT6	YER088C	YJL049W	P47048	450 aa		3	□□□□□ -1.93
DOT6	YER088C	NSI1	Q12457	570 aa		3	□□□□□ -1.93
DOT6	YER088C	SRM1	P21827	482 aa		2.99	□□□□□ -1.93
DOT6	YER088C	HBS1	P32769	611 aa	Known RBP	2.99	□□□□□ -1.93
DOT6	YER088C	AIM26	P32858	118 aa		2.99	□□□□□ -1.93
DOT6	YER088C	LIP5	P32875	414 aa		2.99	□□□□□ -1.93
DOT6	YER088C	TSA1	P34760	196 aa	Known RBP	2.99	□□□□□ -1.93
DOT6	YER088C	NNF1	P47149	201 aa		2.99	□□□□□ -1.93
DOT6	YER088C	ORC1	P54784	914 aa	Predicted RBP	2.99	□□□□□ -1.93
DOT6	YER088C	NAN1	Q02931	896 aa	Known RBP	2.99	□□□□□ -1.93
DOT6	YER088C	BUL2	Q03758	920 aa	Known RBP	2.99	□□□□□ -1.93
DOT6	YER088C	BDF2	Q07442	638 aa		2.99	□□□□□ -1.93
DOT6	YER088C	FMP25	Q08023	583 aa		2.99	□□□□□ -1.93
DOT6	YER088C	RAD4	P14736	754 aa		2.98	□□□□□ -1.93
DOT6	YER088C	RPL8B	P29453	256 aa	Known RBP	2.98	□□□□□ -1.93
DOT6	YER088C	CDC12	P32468	407 aa	Known RBP	2.98	□□□□□ -1.93
DOT6	YER088C	NPP2	P39997	493 aa		2.98	□□□□□ -1.93
DOT6	YER088C	SEC26	P41810	973 aa	Known RBP	2.98	□□□□□ -1.93
DOT6	YER088C	NBA1	Q08229	501 aa	Known RBP	2.98	□□□□□ -1.93
DOT6	YER088C	YLL058W	Q12198	575 aa		2.98	□□□□□ -1.93
DOT6	YER088C	DFG16	Q99234	619 aa		2.98	□□□□□ -1.93
DOT6	YER088C	ATG2	P53855	1592 aa		2.98	□□□□□ -1.93
DOT6	YER088C	SPS1	P08458	490 aa		2.98	□□□□□ -1.93
DOT6	YER088C	MAC1	P35192	417 aa		2.98	□□□□□ -1.93
DOT6	YER088C	SNF7	P39929	240 aa	Known RBP	2.98	□□□□□ -1.93
DOT6	YER088C	SIT1	P39980	628 aa		2.98	□□□□□ -1.93
DOT6	YER088C	RRT14	P40470	206 aa		2.98	□□□□□ -1.93
DOT6	YER088C	KRI1	P42846	591 aa	Known RBP	2.98	□□□□□ -1.93
DOT6	YER088C	HUL5	P53119	910 aa		2.98	□□□□□ -1.93
DOT6	YER088C	UTP8	P53276	713 aa	Known RBP	2.98	□□□□□ -1.93
DOT6	YER088C	NSE3	Q05541	303 aa		2.98	□□□□□ -1.93
DOT6	YER088C	PPM2	Q08282	695 aa		2.98	□□□□□ -1.93
DOT6	YER088C	YOL098C	Q12496	1037 aa		2.98	□□□□□ -1.93
DOT6	YER088C	HFM1	P51979	1187 aa		2.97	□□□□□ -1.93
DOT6	YER088C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
DOT6	YER088C	SIZ1	Q04195	904 aa		2.97	□□□□□ -1.93
DOT6	YER088C	XYL2	Q07993	356 aa		2.97	□□□□□ -1.93
DOT6	YER088C	MDM38	Q08179	573 aa		2.97	□□□□□ -1.93
DOT6	YER088C	SVS1	Q12254	260 aa		2.97	□□□□□ -1.93
DOT6	YER088C	SEG2	P34250	1132 aa		2.97	□□□□□ -1.93
DOT6	YER088C	POL12	P38121	705 aa	Predicted RBP	2.97	□□□□□ -1.93
DOT6	YER088C	GIC1	P38785	314 aa		2.97	□□□□□ -1.93
DOT6	YER088C	BUD6	P41697	788 aa		2.97	□□□□□ -1.93
DOT6	YER088C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	2.97	□□□□□ -1.93	not detected
DOT6	YER088C	SSK2	P53599	1579 aa		2.96	□□□□□ -1.94
DOT6	YER088C	NPP1	P25353	742 aa		2.96	□□□□□ -1.94
DOT6	YER088C	RFC5	P38251	354 aa		2.96	□□□□□ -1.94
DOT6	YER088C	ETP1	P38748	585 aa	Known RBP	2.96	□□□□□ -1.94
DOT6	YER088C	SRT1	Q03175	343 aa		2.96	□□□□□ -1.94
DOT6	YER088C	MSC2	Q03455	724 aa		2.96	□□□□□ -1.94
DOT6	YER088C	RPN4	Q03465	531 aa		2.96	□□□□□ -1.94
DOT6	YER088C	TAF8	Q03750	510 aa		2.96	□□□□□ -1.94
DOT6	YER088C	CDA2	Q06703	312 aa		2.96	□□□□□ -1.94
DOT6	YER088C	RSB1	Q08417	382 aa		2.96	□□□□□ -1.94
DOT6	YER088C	THS1	P04801	734 aa	Known RBP	2.95	□□□□□ -1.94
DOT6	YER088C	TSL1	P38427	1098 aa	Known RBP	2.95	□□□□□ -1.94
DOT6	YER088C	ECL1	P48235	211 aa		2.95	□□□□□ -1.94
DOT6	YER088C	YKE2	P52553	114 aa		2.95	□□□□□ -1.94
DOT6	YER088C	ENV11	P53246	860 aa		2.95	□□□□□ -1.94
DOT6	YER088C	NRD1	P53617	575 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
DOT6	YER088C	DUS3	Q06053	668 aa	Known RBP	2.95	□□□□□ -1.94
DOT6	YER088C	UBX5	Q06682	500 aa		2.95	□□□□□ -1.94
DOT6	YER088C	SPO75	Q07798	868 aa		2.95	□□□□□ -1.94
DOT6	YER088C	FLC1	Q08967	793 aa		2.95	□□□□□ -1.94
DOT6	YER088C	XRN1	P22147	1528 aa	Known RBP	2.95	□□□□□ -1.94
DOT6	YER088C	CYC1	P00044	109 aa	Predicted RBP	2.95	□□□□□ -1.94
DOT6	YER088C	STI1	P15705	589 aa	Known RBP RIP-Chip data	2.95	□□□□□ -1.94	not detected
DOT6	YER088C	PRP9	P19736	530 aa	Known RBP	2.95	□□□□□ -1.94
DOT6	YER088C	YAP1801	P38856	637 aa		2.95	□□□□□ -1.94
DOT6	YER088C	TIM54	P47045	478 aa		2.95	□□□□□ -1.94
DOT6	YER088C	ERP6	P53198	216 aa		2.95	□□□□□ -1.94
DOT6	YER088C	PLB2	Q03674	706 aa		2.95	□□□□□ -1.94
DOT6	YER088C	EAF1	Q06337	982 aa		2.95	□□□□□ -1.94
DOT6	YER088C	YDR306C	Q06640	478 aa		2.95	□□□□□ -1.94
DOT6	YER088C	HBN1	Q96VH4	193 aa		2.95	□□□□□ -1.94
DOT6	YER088C	YCF1	P39109	1515 aa	Known RBP	2.94	□□□□□ -1.94
DOT6	YER088C	YTA7	P40340	1379 aa		2.94	□□□□□ -1.94
DOT6	YER088C	CIT1	P00890	479 aa		2.94	□□□□□ -1.94
DOT6	YER088C	CDC6	P09119	513 aa		2.94	□□□□□ -1.94
DOT6	YER088C	FUN30	P31380	1131 aa		2.94	□□□□□ -1.94
DOT6	YER088C	ELM1	P32801	640 aa		2.94	□□□□□ -1.94
DOT6	YER088C	BET3	P36149	193 aa		2.94	□□□□□ -1.94
DOT6	YER088C	ERT1	P38140	529 aa		2.94	□□□□□ -1.94
DOT6	YER088C	YBR238C	P38330	731 aa	Known RBP	2.94	□□□□□ -1.94
DOT6	YER088C	RSP5	P39940	809 aa	Known RBP	2.94	□□□□□ -1.94
DOT6	YER088C	ALR2	P43553	858 aa		2.94	□□□□□ -1.94
DOT6	YER088C	MRPL22	P53881	309 aa		2.94	□□□□□ -1.94
DOT6	YER088C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	2.94	□□□□□ -1.94	not detected
DOT6	YER088C	YDR132C	Q03900	495 aa		2.94	□□□□□ -1.94
DOT6	YER088C	CAN1	P04817	590 aa		2.93	□□□□□ -1.94
DOT6	YER088C	TOP3	P13099	656 aa		2.93	□□□□□ -1.94
DOT6	YER088C	HSP60	P19882	572 aa	Known RBP	2.93	□□□□□ -1.94
DOT6	YER088C	ECM21	P38167	1117 aa	Known RBP	2.93	□□□□□ -1.94
DOT6	YER088C	SAH1	P39954	449 aa	Known RBP	2.93	□□□□□ -1.94
DOT6	YER088C	GYP7	P48365	746 aa		2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 136.7 ms