RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C UGA4P32837 571 aa6.39□□□□□ -1.39
SEC20YDR498C MFT1P33441 392 aaKnown RBP6.39□□□□□ -1.39
SEC20YDR498C UBP5P39944 805 aa6.39□□□□□ -1.39
SEC20YDR498C EMP47P43555 445 aa6.39□□□□□ -1.39
SEC20YDR498C STU2P46675 888 aa6.39□□□□□ -1.39
SEC20YDR498C HFM1P51979 1187 aa6.39□□□□□ -1.39
SEC20YDR498C SDA1P53313 767 aaKnown RBP6.39□□□□□ -1.39
SEC20YDR498C YNR021WP53723 404 aaKnown RBP6.39□□□□□ -1.39
SEC20YDR498C FPK1P53739 893 aa6.39□□□□□ -1.39
SEC20YDR498C ORC4P54791 529 aa6.39□□□□□ -1.39
SEC20YDR498C EBS1Q03466 884 aaKnown RBP6.39□□□□□ -1.39
SEC20YDR498C TMA64Q04600 565 aaKnown RBP6.39□□□□□ -1.39
SEC20YDR498C OXR1Q08952 273 aa6.39□□□□□ -1.39
SEC20YDR498C YPR015CQ12531 247 aa6.39□□□□□ -1.39
SEC20YDR498C MRC1P25588 1096 aa6.38□□□□□ -1.39
SEC20YDR498C NUD1P32336 851 aa6.38□□□□□ -1.39
SEC20YDR498C TGL1P34163 548 aa6.38□□□□□ -1.39
SEC20YDR498C RPC25P35718 212 aa6.38□□□□□ -1.39
SEC20YDR498C UBP11P36026 717 aa6.38□□□□□ -1.39
SEC20YDR498C SUL1P38359 859 aa6.38□□□□□ -1.39
SEC20YDR498C ACA1P39970 489 aa6.38□□□□□ -1.39
SEC20YDR498C BIM1P40013 344 aa6.38□□□□□ -1.39
SEC20YDR498C NIT1P40447 199 aa6.38□□□□□ -1.39
SEC20YDR498C ATF2P53296 535 aa6.38□□□□□ -1.39
SEC20YDR498C BNI5P53890 448 aaKnown RBP6.38□□□□□ -1.39
SEC20YDR498C SEN54Q02825 467 aaPredicted RBP6.38□□□□□ -1.39
SEC20YDR498C GFD1Q04839 188 aaKnown RBP6.38□□□□□ -1.39
SEC20YDR498C SPP382Q06411 708 aaPredicted RBP6.38□□□□□ -1.39
SEC20YDR498C YAP7Q08182 245 aa6.38□□□□□ -1.39
SEC20YDR498C RIF1P29539 1916 aa6.38□□□□□ -1.39
SEC20YDR498C THS1P04801 734 aaKnown RBP6.37□□□□□ -1.39
SEC20YDR498C RPS9BP05755 195 aaKnown RBP6.37□□□□□ -1.39
SEC20YDR498C SPO11P23179 398 aa6.37□□□□□ -1.39
SEC20YDR498C PHO88P38264 188 aaPredicted RBP6.37□□□□□ -1.39
SEC20YDR498C MIP6P38760 659 aaKnown RBP6.37□□□□□ -1.39
SEC20YDR498C PES4P39684 611 aa6.37□□□□□ -1.39
SEC20YDR498C ULP2P40537 1034 aaPredicted RBP6.37□□□□□ -1.39
SEC20YDR498C VTC2P43585 828 aa6.37□□□□□ -1.39
SEC20YDR498C FMS1P50264 508 aa6.37□□□□□ -1.39
SEC20YDR498C YGL039WP53183 348 aaKnown RBP6.37□□□□□ -1.39
SEC20YDR498C SNU71P53207 620 aaKnown RBP6.37□□□□□ -1.39
SEC20YDR498C RTC4P53850 401 aa6.37□□□□□ -1.39
SEC20YDR498C CBK1P53894 756 aa6.37□□□□□ -1.39
SEC20YDR498C ILV1P00927 576 aaKnown RBP6.36□□□□□ -1.39
SEC20YDR498C CDC37P06101 506 aaKnown RBP6.36□□□□□ -1.39
SEC20YDR498C FBP1P09201 348 aa6.36□□□□□ -1.39
SEC20YDR498C TUP1P16649 713 aa6.36□□□□□ -1.39
SEC20YDR498C RPL8AP17076 256 aaKnown RBP6.36□□□□□ -1.39
SEC20YDR498C CLB5P30283 435 aa6.36□□□□□ -1.39
SEC20YDR498C PIH1P38768 344 aa6.36□□□□□ -1.39
SEC20YDR498C HUL4P40985 892 aa6.36□□□□□ -1.39
SEC20YDR498C GUP1P53154 560 aa6.36□□□□□ -1.39
SEC20YDR498C DIP5P53388 608 aa6.36□□□□□ -1.39
SEC20YDR498C YML037CQ03703 340 aa6.36□□□□□ -1.39
SEC20YDR498C BUL2Q03758 920 aaKnown RBP6.36□□□□□ -1.39
SEC20YDR498C PUS5Q06244 254 aa6.36□□□□□ -1.39
SEC20YDR498C CWC2Q12046 339 aaPredicted RBP6.36□□□□□ -1.39
SEC20YDR498C ARP6Q12509 438 aa6.36□□□□□ -1.39
SEC20YDR498C SAM1P10659 382 aaKnown RBP6.35□□□□□ -1.39
SEC20YDR498C RAD18P10862 487 aa6.35□□□□□ -1.39
SEC20YDR498C CKA2P19454 339 aa6.35□□□□□ -1.39
SEC20YDR498C ESS1P22696 170 aa6.35□□□□□ -1.39
SEC20YDR498C YDJ1P25491 409 aaKnown RBP6.35□□□□□ -1.39
SEC20YDR498C TRK2P28584 889 aa6.35□□□□□ -1.39
SEC20YDR498C RTG2P32608 588 aaKnown RBP6.35□□□□□ -1.39
SEC20YDR498C YKL091CP33324 310 aaKnown RBP6.35□□□□□ -1.39
SEC20YDR498C SAS3P34218 831 aa6.35□□□□□ -1.39
SEC20YDR498C YEL1P34225 687 aa6.35□□□□□ -1.39
SEC20YDR498C PGM2P37012 569 aaKnown RBP6.35□□□□□ -1.39
SEC20YDR498C CTM1P38818 585 aa6.35□□□□□ -1.39
SEC20YDR498C PNT1P38969 423 aa6.35□□□□□ -1.39
SEC20YDR498C TFG2P41896 400 aaPredicted RBP6.35□□□□□ -1.39
SEC20YDR498C GPD2P41911 440 aaKnown RBP6.35□□□□□ -1.39
SEC20YDR498C OSW7P43611 510 aa6.35□□□□□ -1.39
SEC20YDR498C PGA2P53903 129 aa6.35□□□□□ -1.39
SEC20YDR498C FUS2Q05670 677 aa6.35□□□□□ -1.39
SEC20YDR498C HCR1Q05775 265 aaKnown RBP6.35□□□□□ -1.39
SEC20YDR498C UBX5Q06682 500 aa6.35□□□□□ -1.39
SEC20YDR498C TLG2Q08144 397 aa6.35□□□□□ -1.39
SEC20YDR498C TCO89Q08921 799 aa6.35□□□□□ -1.39
SEC20YDR498C SPO12P17123 173 aa6.34□□□□□ -1.39
SEC20YDR498C GSY1P23337 708 aa6.34□□□□□ -1.39
SEC20YDR498C PRP22P24384 1145 aaKnown RBP6.34□□□□□ -1.39
SEC20YDR498C MSH3P25336 1018 aa6.34□□□□□ -1.39
SEC20YDR498C RRP43P25359 394 aaPredicted RBP6.34□□□□□ -1.39
SEC20YDR498C SRO9P25567 434 aaKnown RBP6.34□□□□□ -1.39
SEC20YDR498C SHP1P34223 423 aa6.34□□□□□ -1.39
SEC20YDR498C PPS1P38148 807 aa6.34□□□□□ -1.39
SEC20YDR498C SEC9P40357 651 aa6.34□□□□□ -1.39
SEC20YDR498C ROG3P43602 733 aa6.34□□□□□ -1.39
SEC20YDR498C YJL007CP47080 104 aa6.34□□□□□ -1.39
SEC20YDR498C ISM1P48526 1002 aa6.34□□□□□ -1.39
SEC20YDR498C TAD1P53065 400 aa6.34□□□□□ -1.39
SEC20YDR498C SOL4P53315 255 aa6.34□□□□□ -1.39
SEC20YDR498C ARK1P53974 638 aa6.34□□□□□ -1.39
SEC20YDR498C ALD6P54115 500 aaKnown RBP6.34□□□□□ -1.39
SEC20YDR498C MFM1Q02783 413 aa6.34□□□□□ -1.39
SEC20YDR498C COG4Q06096 861 aa6.34□□□□□ -1.39
SEC20YDR498C GYP1Q08484 637 aa6.34□□□□□ -1.39
SEC20YDR498C HMI1Q12039 706 aa6.34□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms