RNA–Protein interactions for RNA: YDR079C-A

TFB5, Transcript of Component of RNA polymerase II general transcription factor TFIIH, yeastyeast

Gene TFB5, Length 219 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFB5YDR079C-A ALG7P07286 448 aa2.05□□□□□ -2.08
TFB5YDR079C-A ALG3P38179 458 aa2.05□□□□□ -2.08
TFB5YDR079C-A TRP4P07285 380 aaPredicted RBP2.04□□□□□ -2.08
TFB5YDR079C-A HCA4P20448 770 aaKnown RBP2.04□□□□□ -2.08
TFB5YDR079C-A ZRG8P40021 1076 aa2.04□□□□□ -2.08
TFB5YDR079C-A VPS73P53142 486 aaKnown RBP2.04□□□□□ -2.08
TFB5YDR079C-A GUP2Q08929 609 aa2.04□□□□□ -2.08
TFB5YDR079C-A TRM13Q12383 476 aa2.04□□□□□ -2.08
TFB5YDR079C-A ACE2P21192 770 aa2.03□□□□□ -2.08
TFB5YDR079C-A MEP2P41948 499 aa2.03□□□□□ -2.08
TFB5YDR079C-A HEM13P11353 328 aaKnown RBP2.02□□□□□ -2.09
TFB5YDR079C-A ADY2P25613 283 aa2.02□□□□□ -2.09
TFB5YDR079C-A GLO3P38682 493 aaKnown RBP2.02□□□□□ -2.09
TFB5YDR079C-A RSM26P47141 266 aa2.02□□□□□ -2.09
TFB5YDR079C-A NCS6P53088 359 aa2.02□□□□□ -2.09
TFB5YDR079C-A TRS120Q04183 1289 aa2.02□□□□□ -2.09
TFB5YDR079C-A EST2Q06163 884 aa2.02□□□□□ -2.09
TFB5YDR079C-A RGT2Q12300 763 aa2.02□□□□□ -2.09
TFB5YDR079C-A ENA1P13587 1091 aa2.01□□□□□ -2.09
TFB5YDR079C-A YHL017WP38745 532 aa2.01□□□□□ -2.09
TFB5YDR079C-A PEX28P38848 579 aa2.01□□□□□ -2.09
TFB5YDR079C-A QDR1P40475 563 aa2.01□□□□□ -2.09
TFB5YDR079C-A ENA2Q01896 1091 aa2.01□□□□□ -2.09
TFB5YDR079C-A YCS4Q06156 1176 aa2.01□□□□□ -2.09
TFB5YDR079C-A ENA5Q12691 1091 aa2.01□□□□□ -2.09
TFB5YDR079C-A MET6P05694 767 aaKnown RBP2□□□□□ -2.09
TFB5YDR079C-A GEF1P37020 779 aa2□□□□□ -2.09
TFB5YDR079C-A MPS1P54199 764 aa2□□□□□ -2.09
TFB5YDR079C-A CIR2Q08822 631 aa2□□□□□ -2.09
TFB5YDR079C-A CAD1P24813 409 aaKnown RBP1.99□□□□□ -2.09
TFB5YDR079C-A SQT1P35184 431 aa1.99□□□□□ -2.09
TFB5YDR079C-A SLX1P38324 304 aa1.99□□□□□ -2.09
TFB5YDR079C-A YIL166CP40445 542 aa1.99□□□□□ -2.09
TFB5YDR079C-A HFM1P51979 1187 aa1.99□□□□□ -2.09
TFB5YDR079C-A MRI1Q06489 411 aaKnown RBP1.99□□□□□ -2.09
TFB5YDR079C-A NOC3Q07896 663 aaPredicted RBP1.99□□□□□ -2.09
TFB5YDR079C-A SPE1P08432 466 aa1.98□□□□□ -2.09
TFB5YDR079C-A UGA4P32837 571 aa1.98□□□□□ -2.09
TFB5YDR079C-A PPS1P38148 807 aa1.98□□□□□ -2.09
TFB5YDR079C-A RSP5P39940 809 aaKnown RBP1.98□□□□□ -2.09
TFB5YDR079C-A URM1P40554 99 aaPredicted RBP1.98□□□□□ -2.09
TFB5YDR079C-A DAS1P47005 663 aa1.98□□□□□ -2.09
TFB5YDR079C-A YGL140CP53120 1219 aa1.98□□□□□ -2.09
TFB5YDR079C-A ORC2P32833 620 aa1.97□□□□□ -2.09
TFB5YDR079C-A RRT14P40470 206 aa1.97□□□□□ -2.09
TFB5YDR079C-A RIM13Q03792 727 aa1.97□□□□□ -2.09
TFB5YDR079C-A YER152CP10356 443 aa1.96□□□□□ -2.1
TFB5YDR079C-A XYL2Q07993 356 aa1.96□□□□□ -2.1
TFB5YDR079C-A SEC23P15303 768 aaKnown RBP1.95□□□□□ -2.1
TFB5YDR079C-A BAS1P22035 811 aa1.95□□□□□ -2.1
TFB5YDR079C-A DED81P38707 554 aaKnown RBP1.95□□□□□ -2.1
TFB5YDR079C-A BNA3P47039 444 aaKnown RBP1.95□□□□□ -2.1
TFB5YDR079C-A ULP1Q02724 621 aa1.95□□□□□ -2.1
TFB5YDR079C-A CDA1Q06702 301 aa1.95□□□□□ -2.1
TFB5YDR079C-A BI4P03879 638 aa1.94□□□□□ -2.1
TFB5YDR079C-A DED1P06634 604 aaKnown RBP1.94□□□□□ -2.1
TFB5YDR079C-A CDC43P18898 376 aa1.94□□□□□ -2.1
TFB5YDR079C-A PRP40P33203 583 aaKnown RBP1.94□□□□□ -2.1
TFB5YDR079C-A YGR012WP53206 393 aa1.94□□□□□ -2.1
TFB5YDR079C-A YAP1801P38856 637 aa1.93□□□□□ -2.1
TFB5YDR079C-A ERG5P54781 538 aa1.93□□□□□ -2.1
TFB5YDR079C-A SEG1Q04279 960 aa1.93□□□□□ -2.1
TFB5YDR079C-A FRE5Q08908 694 aa1.93□□□□□ -2.1
TFB5YDR079C-A UGA2P38067 497 aa1.92□□□□□ -2.1
TFB5YDR079C-A RGD1P38339 666 aa1.92□□□□□ -2.1
TFB5YDR079C-A ACF4P47129 309 aa1.92□□□□□ -2.1
TFB5YDR079C-A SAM37P50110 327 aa1.92□□□□□ -2.1
TFB5YDR079C-A ATG1P53104 897 aa1.92□□□□□ -2.1
TFB5YDR079C-A KIN3P22209 435 aa1.91□□□□□ -2.1
TFB5YDR079C-A CIC1P38779 376 aaKnown RBP1.91□□□□□ -2.1
TFB5YDR079C-A CCC2P38995 1004 aa1.91□□□□□ -2.1
TFB5YDR079C-A RAT1Q02792 1006 aaKnown RBP1.91□□□□□ -2.1
TFB5YDR079C-A WHI4Q07655 649 aaKnown RBP1.91□□□□□ -2.1
TFB5YDR079C-A KAR2P16474 682 aaKnown RBP1.9□□□□□ -2.11
TFB5YDR079C-A PTP1P25044 335 aa1.9□□□□□ -2.11
TFB5YDR079C-A ATG19P35193 415 aa1.9□□□□□ -2.11
TFB5YDR079C-A LTP1P40347 161 aa1.9□□□□□ -2.11
TFB5YDR079C-A NET1P47035 1189 aa1.9□□□□□ -2.11
TFB5YDR079C-A PSP2P50109 593 aaKnown RBP1.9□□□□□ -2.11
TFB5YDR079C-A GEP3Q08622 556 aa1.9□□□□□ -2.11
TFB5YDR079C-A APM1Q00776 475 aaPredicted RBP1.89□□□□□ -2.11
TFB5YDR079C-A SLU7Q02775 382 aaKnown RBP1.89□□□□□ -2.11
TFB5YDR079C-A GPI13Q07830 1017 aa1.89□□□□□ -2.11
TFB5YDR079C-A HOM2P13663 365 aaKnown RBP1.88□□□□□ -2.11
TFB5YDR079C-A SPO11P23179 398 aa1.88□□□□□ -2.11
TFB5YDR079C-A SRP101P32916 621 aa1.88□□□□□ -2.11
TFB5YDR079C-A KAR5Q04746 504 aa1.88□□□□□ -2.11
TFB5YDR079C-A ADY4Q05955 493 aa1.88□□□□□ -2.11
TFB5YDR079C-A ACM1Q08981 209 aa1.88□□□□□ -2.11
TFB5YDR079C-A SLA2P33338 968 aa1.87□□□□□ -2.11
TFB5YDR079C-A MXR1P40029 184 aa1.87□□□□□ -2.11
TFB5YDR079C-A UPC2Q12151 913 aa1.87□□□□□ -2.11
TFB5YDR079C-A HSF1P10961 833 aa1.86□□□□□ -2.11
TFB5YDR079C-A MLS1P30952 554 aa1.86□□□□□ -2.11
TFB5YDR079C-A PCL5P38794 229 aa1.86□□□□□ -2.11
TFB5YDR079C-A MET30P39014 640 aa1.86□□□□□ -2.11
TFB5YDR079C-A MTC3P53077 123 aa1.86□□□□□ -2.11
TFB5YDR079C-A YPL068CQ02749 293 aa1.86□□□□□ -2.11
TFB5YDR079C-A YLR149CQ99296 730 aa1.86□□□□□ -2.11
TFB5YDR079C-A TAF13P11747 167 aa1.85□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 23.9 ms