RNA–Protein interactions for RNA: NME1

NME1, Transcript of RNA component of RNase MRP, yeastyeast

Gene NME1, Length 340 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NME1NME1 YPL062WQ02781 134 aa11.07□□□□□ -0.64
NME1NME1 YMR187CQ03236 431 aa11.07□□□□□ -0.64
NME1NME1 TOP3P13099 656 aa11.06□□□□□ -0.64
NME1NME1 SLA2P33338 968 aa11.06□□□□□ -0.64
NME1NME1 UGA2P38067 497 aa11.06□□□□□ -0.64
NME1NME1 CCZ1P38273 704 aa11.06□□□□□ -0.64
NME1NME1 SAH1P39954 449 aaKnown RBP11.06□□□□□ -0.64
NME1NME1 NAM7P30771 971 aaKnown RBP11.05□□□□□ -0.64
NME1NME1 TAT1P38085 619 aa11.05□□□□□ -0.64
NME1NME1 YHL012WP38709 493 aa11.05□□□□□ -0.64
NME1NME1 GDH3P39708 457 aa11.05□□□□□ -0.64
NME1NME1 IOC4Q04213 475 aa11.05□□□□□ -0.64
NME1NME1 YOR059CQ08448 450 aaKnown RBP11.05□□□□□ -0.64
NME1NME1 YPR071WQ12346 211 aa11.05□□□□□ -0.64
NME1NME1 MSD1P15179 658 aaKnown RBP11.04□□□□□ -0.64
NME1NME1 SNF5P18480 905 aa11.04□□□□□ -0.64
NME1NME1 CDC12P32468 407 aaKnown RBP11.04□□□□□ -0.64
NME1NME1 WHI3P34761 661 aaKnown RBP11.04□□□□□ -0.64
NME1NME1 PET10P36139 283 aa11.04□□□□□ -0.64
NME1NME1 YRO2P38079 344 aa11.04□□□□□ -0.64
NME1NME1 UBP6P43593 499 aaKnown RBP11.04□□□□□ -0.64
NME1NME1 CIT3P43635 486 aa11.04□□□□□ -0.64
NME1NME1 YJR142WP47173 342 aa11.04□□□□□ -0.64
NME1NME1 YVC1Q12324 675 aa11.04□□□□□ -0.64
NME1NME1 BAP2P38084 609 aa11.03□□□□□ -0.64
NME1NME1 PIK1P39104 1066 aa11.03□□□□□ -0.64
NME1NME1 YFL054CP43549 646 aa11.03□□□□□ -0.64
NME1NME1 NOP14Q99207 810 aaKnown RBP11.03□□□□□ -0.64
NME1NME1 SLN1P39928 1220 aaPredicted RBP11.02□□□□□ -0.65
NME1NME1 UGO1Q03327 502 aa11.02□□□□□ -0.65
NME1NME1 LCD1Q04377 747 aa11.02□□□□□ -0.65
NME1NME1 PUF3Q07807 879 aaKnown RBP RIP-Chip data11.02□□□□□ -0.65not detected
NME1NME1 NTG2Q08214 380 aa11.02□□□□□ -0.65
NME1NME1 YPR053CQ6Q5F3 151 aa11.02□□□□□ -0.65
NME1NME1 YCK2P23292 546 aaKnown RBP11.01□□□□□ -0.65
NME1NME1 SRO9P25567 434 aaKnown RBP11.01□□□□□ -0.65
NME1NME1 HRQ1Q05549 1077 aa11.01□□□□□ -0.65
NME1NME1 PHM7Q12252 991 aa11.01□□□□□ -0.65
NME1NME1 COQ2P32378 372 aa11□□□□□ -0.65
NME1NME1 MDL2P33311 773 aa11□□□□□ -0.65
NME1NME1 SAF1P38352 637 aa11□□□□□ -0.65
NME1NME1 YGL081WP53156 320 aa11□□□□□ -0.65
NME1NME1 NBA1Q08229 501 aaKnown RBP11□□□□□ -0.65
NME1NME1 RCM1P53972 490 aa10.99□□□□□ -0.65
NME1NME1 RCL1Q08096 367 aaPredicted RBP10.99□□□□□ -0.65
NME1NME1 YLL058WQ12198 575 aa10.99□□□□□ -0.65
NME1NME1 SAM35P14693 329 aa10.98□□□□□ -0.65
NME1NME1 MTC5Q03897 1148 aa10.98□□□□□ -0.65
NME1NME1 RSB1Q08417 382 aa10.98□□□□□ -0.65
NME1NME1 SRM1P21827 482 aa10.97□□□□□ -0.65
NME1NME1 SFP1P32432 683 aa10.97□□□□□ -0.65
NME1NME1 PEX6P33760 1030 aa10.97□□□□□ -0.65
NME1NME1 YKL151CP36059 337 aa10.97□□□□□ -0.65
NME1NME1 MAL11P53048 616 aa10.97□□□□□ -0.65
NME1NME1 BI4P03879 638 aa10.96□□□□□ -0.65
NME1NME1 ALG2P43636 503 aa10.96□□□□□ -0.65
NME1NME1 NSI1Q12457 570 aa10.96□□□□□ -0.65
NME1NME1 TSR4P25040 408 aa10.95□□□□□ -0.66
NME1NME1 TOK1P40310 691 aa10.95□□□□□ -0.66
NME1NME1 CCM1P48237 864 aaPredicted RBP10.95□□□□□ -0.66
NME1NME1 DNM1P54861 757 aa10.95□□□□□ -0.66
NME1NME1 REC104P33323 182 aa10.94□□□□□ -0.66
NME1NME1 BUL2Q03758 920 aaKnown RBP10.94□□□□□ -0.66
NME1NME1 MDM38Q08179 573 aa10.94□□□□□ -0.66
NME1NME1 CHS2P14180 963 aa10.93□□□□□ -0.66
NME1NME1 MSB1P21339 1137 aaKnown RBP10.93□□□□□ -0.66
NME1NME1 GSY1P23337 708 aa10.93□□□□□ -0.66
NME1NME1 AFR1P33304 620 aa10.93□□□□□ -0.66
NME1NME1 RRT14P40470 206 aa10.93□□□□□ -0.66
NME1NME1 RSC58Q07979 502 aa10.93□□□□□ -0.66
NME1NME1 ADR1P07248 1323 aa10.92□□□□□ -0.66
NME1NME1 PHR1P05066 565 aaKnown RBP RIP-Chip data10.92□□□□□ -0.66not detected
NME1NME1 RAD53P22216 821 aa10.92□□□□□ -0.66
NME1NME1 NPP1P25353 742 aa10.92□□□□□ -0.66
NME1NME1 PGM1P33401 570 aaKnown RBP10.92□□□□□ -0.66
NME1NME1 YKR078WP36158 585 aaKnown RBP10.92□□□□□ -0.66
NME1NME1 DSS1P39112 969 aa10.92□□□□□ -0.66
NME1NME1 TRE1Q08919 783 aa10.92□□□□□ -0.66
NME1NME1 MDM12Q92328 271 aa10.92□□□□□ -0.66
NME1NME1 SKN7P38889 622 aa10.91□□□□□ -0.66
NME1NME1 OYE3P41816 400 aaPredicted RBP10.91□□□□□ -0.66
NME1NME1 GYP7P48365 746 aa10.91□□□□□ -0.66
NME1NME1 TFB2Q02939 513 aa10.91□□□□□ -0.66
NME1NME1 RPL8AP17076 256 aaKnown RBP10.9□□□□□ -0.66
NME1NME1 ERT1P38140 529 aa10.9□□□□□ -0.66
NME1NME1 CRP1P38845 465 aaKnown RBP10.9□□□□□ -0.66
NME1NME1 ICP55P40051 511 aa10.9□□□□□ -0.66
NME1NME1 YPL034WQ03083 165 aa10.9□□□□□ -0.66
NME1NME1 ATG13Q06628 738 aa10.9□□□□□ -0.66
NME1NME1 YER158CP40095 573 aa10.89□□□□□ -0.67
NME1NME1 MCA1Q08601 432 aa10.89□□□□□ -0.67
NME1NME1 ACE2P21192 770 aa10.88□□□□□ -0.67
NME1NME1 TSL1P38427 1098 aaKnown RBP10.88□□□□□ -0.67
NME1NME1 PEX7P39108 375 aa10.88□□□□□ -0.67
NME1NME1 SRT1Q03175 343 aa10.88□□□□□ -0.67
NME1NME1 SVS1Q12254 260 aa10.88□□□□□ -0.67
NME1NME1 CDC48P25694 835 aaKnown RBP10.87□□□□□ -0.67
NME1NME1 AIM26P32858 118 aa10.87□□□□□ -0.67
NME1NME1 GIC1P38785 314 aa10.87□□□□□ -0.67
NME1NME1 MTC3P53077 123 aa10.87□□□□□ -0.67
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms