RNA–Protein interactions for RNA: ENST00000540352.5

MDM2-226, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 1,315 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-226ENST00000540352 ZNF232Q9UNY5 417 aa7.01□□□□□ -1.29
MDM2-226ENST00000540352 ELOAQ14241 798 aaKnown RBP7□□□□□ -1.29
MDM2-226ENST00000540352 CHMP7Q8WUX9 453 aaPredicted RBP7□□□□□ -1.29
MDM2-226ENST00000540352 GPAMQ9HCL2 828 aa7□□□□□ -1.29
MDM2-226ENST00000540352 ZMIZ1Q9ULJ6 1067 aa7□□□□□ -1.29
MDM2-226ENST00000540352 USP3Q9Y6I4 520 aa7□□□□□ -1.29
MDM2-226ENST00000540352 CDC14CA4D256 554 aa6.99□□□□□ -1.29
MDM2-226ENST00000540352 SLC35F4A4IF30 521 aa6.99□□□□□ -1.29
MDM2-226ENST00000540352 PPP1R12BO60237 982 aaPredicted RBP6.99□□□□□ -1.29
MDM2-226ENST00000540352 CSB-PGBD3P0DP91 1061 aa6.99□□□□□ -1.29
MDM2-226ENST00000540352 EPHA4P54764 986 aa6.99□□□□□ -1.29
MDM2-226ENST00000540352 NBPF1Q3BBV0 1214 aa6.99□□□□□ -1.29
MDM2-226ENST00000540352 WDR44Q5JSH3 913 aa6.99□□□□□ -1.29
MDM2-226ENST00000540352 SLC16A10Q8TF71 515 aa6.99□□□□□ -1.29
MDM2-226ENST00000540352 SCG3Q8WXD2 468 aaKnown RBP6.99□□□□□ -1.29
MDM2-226ENST00000540352 PARP3Q9Y6F1 533 aa6.99□□□□□ -1.29
MDM2-226ENST00000540352 SENP3-EIF4A1A0A087X0R7 540 aa6.98□□□□□ -1.29
MDM2-226ENST00000540352 A0A1B0GTH6 734 aa6.98□□□□□ -1.29
MDM2-226ENST00000540352 PPFIA3O75145 1194 aa6.98□□□□□ -1.29
MDM2-226ENST00000540352 PSMA6P60900 246 aaKnown RBP6.98□□□□□ -1.29
MDM2-226ENST00000540352 TMEM164Q5U3C3 297 aa6.98□□□□□ -1.29
MDM2-226ENST00000540352 TREML4Q6UXN2 200 aa6.98□□□□□ -1.29
MDM2-226ENST00000540352 IQSEC3Q9UPP2 1182 aaPredicted RBP6.98□□□□□ -1.29
MDM2-226ENST00000540352 DYRK1BQ9Y463 629 aa6.98□□□□□ -1.29
MDM2-226ENST00000540352 SERTM1A2A2V5 107 aa6.97□□□□□ -1.29
MDM2-226ENST00000540352 TERTO14746 1132 aaKnown RBP6.97□□□□□ -1.29
MDM2-226ENST00000540352 TATP17735 454 aaPredicted RBP6.97□□□□□ -1.29
MDM2-226ENST00000540352 ITGA6P23229 1130 aa6.97□□□□□ -1.29
MDM2-226ENST00000540352 FOXK2Q01167 660 aa6.97□□□□□ -1.29
MDM2-226ENST00000540352 ERICH6BQ5W0A0 696 aa6.97□□□□□ -1.29
MDM2-226ENST00000540352 PGBD3Q8N328 593 aa6.97□□□□□ -1.29
MDM2-226ENST00000540352 PRMT3O60678 531 aa6.96□□□□□ -1.3
MDM2-226ENST00000540352 F11P03951 625 aa6.96□□□□□ -1.3
MDM2-226ENST00000540352 MSX1P28360 303 aa6.96□□□□□ -1.3
MDM2-226ENST00000540352 SWI5Q1ZZU3 235 aa6.96□□□□□ -1.3
MDM2-226ENST00000540352 NPAS3Q8IXF0 933 aa6.96□□□□□ -1.3
MDM2-226ENST00000540352 L3MBTL2Q969R5 705 aa6.96□□□□□ -1.3
MDM2-226ENST00000540352 VTI1AQ96AJ9 217 aa6.96□□□□□ -1.3
MDM2-226ENST00000540352 ATAD2Q6PL18 1390 aa6.95□□□□□ -1.3
MDM2-226ENST00000540352 H3BM21 787 aa6.95□□□□□ -1.3
MDM2-226ENST00000540352 NOS2P35228 1153 aa6.95□□□□□ -1.3
MDM2-226ENST00000540352 TRIM26Q12899 539 aaPredicted RBP6.95□□□□□ -1.3
MDM2-226ENST00000540352 TEAD4Q15561 434 aa6.95□□□□□ -1.3
MDM2-226ENST00000540352 BICDL1Q6ZP65 573 aa6.95□□□□□ -1.3
MDM2-226ENST00000540352 ZDHHC1Q8WTX9 485 aa6.95□□□□□ -1.3
MDM2-226ENST00000540352 PRIMPOLQ96LW4 560 aa6.95□□□□□ -1.3
MDM2-226ENST00000540352 RUBCNLQ9H714 662 aa6.95□□□□□ -1.3
MDM2-226ENST00000540352 H7C1W4 665 aa6.94□□□□□ -1.3
MDM2-226ENST00000540352 IGFBP4P22692 258 aa6.94□□□□□ -1.3
MDM2-226ENST00000540352 ARSJQ5FYB0 599 aaPredicted RBP6.94□□□□□ -1.3
MDM2-226ENST00000540352 ZNF295-AS1Q8N0V1 137 aa6.94□□□□□ -1.3
MDM2-226ENST00000540352 GAS2L2Q8NHY3 880 aa6.94□□□□□ -1.3
MDM2-226ENST00000540352 NGLY1Q96IV0 654 aa6.94□□□□□ -1.3
MDM2-226ENST00000540352 GJA3Q9Y6H8 435 aa6.94□□□□□ -1.3
MDM2-226ENST00000540352 C21orf2O43822 256 aa6.93□□□□□ -1.3
MDM2-226ENST00000540352 WFS1O76024 890 aa6.93□□□□□ -1.3
MDM2-226ENST00000540352 TXLNAP40222 546 aa6.93□□□□□ -1.3
MDM2-226ENST00000540352 EFHC2Q5JST6 749 aa6.93□□□□□ -1.3
MDM2-226ENST00000540352 SH3PXD2AQ5TCZ1 1133 aa6.93□□□□□ -1.3
MDM2-226ENST00000540352 VWA5B2Q8N398 1253 aa6.93□□□□□ -1.3
MDM2-226ENST00000540352 C1orf216Q8TAB5 229 aa6.93□□□□□ -1.3
MDM2-226ENST00000540352 RHPN1Q8TCX5 695 aa6.93□□□□□ -1.3
MDM2-226ENST00000540352 IRF7Q92985 503 aa6.93□□□□□ -1.3
MDM2-226ENST00000540352 NUCKS1Q9H1E3 243 aaKnown RBP6.93□□□□□ -1.3
MDM2-226ENST00000540352 ZDHHC3Q9NYG2 299 aa6.93□□□□□ -1.3
MDM2-226ENST00000540352 HCN4Q9Y3Q4 1203 aa6.93□□□□□ -1.3
MDM2-226ENST00000540352 EML1O00423 815 aa6.92□□□□□ -1.3
MDM2-226ENST00000540352 ATP4AP20648 1035 aa6.92□□□□□ -1.3
MDM2-226ENST00000540352 FOXR1Q6PIV2 292 aa6.92□□□□□ -1.3
MDM2-226ENST00000540352 SV2AQ7L0J3 742 aa6.92□□□□□ -1.3
MDM2-226ENST00000540352 TRIM22Q8IYM9 498 aa6.92□□□□□ -1.3
MDM2-226ENST00000540352 PHACTR1Q9C0D0 580 aa6.92□□□□□ -1.3
MDM2-226ENST00000540352 NEUROD4Q9HD90 331 aa6.92□□□□□ -1.3
MDM2-226ENST00000540352 CUEDC1Q9NWM3 386 aaPredicted RBP6.92□□□□□ -1.3
MDM2-226ENST00000540352 FOXO3O43524 673 aa6.91□□□□□ -1.3
MDM2-226ENST00000540352 WEE1P30291 646 aa6.91□□□□□ -1.3
MDM2-226ENST00000540352 FAM69CQ0P6D2 419 aa6.91□□□□□ -1.3
MDM2-226ENST00000540352 NFX1Q12986 1120 aaKnown RBP6.91□□□□□ -1.3
MDM2-226ENST00000540352 CLP1Q92989 425 aaKnown RBP6.91□□□□□ -1.3
MDM2-226ENST00000540352 GTPBP3Q969Y2 492 aaKnown RBP6.91□□□□□ -1.3
MDM2-226ENST00000540352 ZNF837Q96EG3 531 aaPredicted RBP6.91□□□□□ -1.3
MDM2-226ENST00000540352 C2orf49Q9BVC5 232 aaPredicted RBP6.91□□□□□ -1.3
MDM2-226ENST00000540352 ATP2B4P23634 1241 aa6.9□□□□□ -1.3
MDM2-226ENST00000540352 DBN1Q16643 649 aa6.9□□□□□ -1.3
MDM2-226ENST00000540352 STAG2Q8N3U4 1231 aa6.9□□□□□ -1.3
MDM2-226ENST00000540352 RETREG2Q8NC44 543 aa6.9□□□□□ -1.3
MDM2-226ENST00000540352 GMCL1Q96IK5 515 aa6.9□□□□□ -1.3
MDM2-226ENST00000540352 TRERF1Q96PN7 1200 aa6.9□□□□□ -1.3
MDM2-226ENST00000540352 MKNK1Q9BUB5 465 aa6.9□□□□□ -1.3
MDM2-226ENST00000540352 USTQ9Y2C2 406 aa6.9□□□□□ -1.3
MDM2-226ENST00000540352 A0A1W2PNR3 127 aa6.89□□□□□ -1.31
MDM2-226ENST00000540352 CARNS1A5YM72 827 aa6.89□□□□□ -1.31
MDM2-226ENST00000540352 HIRAP54198 1017 aaPredicted RBP6.89□□□□□ -1.31
MDM2-226ENST00000540352 FKBP5Q13451 457 aaPredicted RBP6.89□□□□□ -1.31
MDM2-226ENST00000540352 LBRQ14739 615 aaKnown RBP6.89□□□□□ -1.31
MDM2-226ENST00000540352 ALDH16A1Q8IZ83 802 aa6.89□□□□□ -1.31
MDM2-226ENST00000540352 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.89□□□□□ -1.311e-8■■■■■ 50.5
MDM2-226ENST00000540352 CXXC1Q9P0U4 656 aaPredicted RBP6.89□□□□□ -1.31
MDM2-226ENST00000540352 ERBB4Q15303 1308 aa6.89□□□□□ -1.31
MDM2-226ENST00000540352 TMEM88BA6NKF7 163 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms