RNA–Protein interactions for RNA: ENST00000488774.1

PTPRD-212, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 3

Gene PTPRD, Length 420 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-212ENST00000488774 COL11A2P13942 1736 aaPredicted RBP8.65□□□□□ -1.03
PTPRD-212ENST00000488774 TAF1P21675 1872 aa8.64□□□□□ -1.03
PTPRD-212ENST00000488774 ANKRD36CQ5JPF3 1778 aa8.64□□□□□ -1.03
PTPRD-212ENST00000488774 BTBD11A6QL63 1104 aa8.64□□□□□ -1.03
PTPRD-212ENST00000488774 NBPF26B4DH59 902 aa8.64□□□□□ -1.03
PTPRD-212ENST00000488774 ANP32CO43423 234 aa8.64□□□□□ -1.03
PTPRD-212ENST00000488774 A1BGP04217 495 aa8.64□□□□□ -1.03
PTPRD-212ENST00000488774 NBPF10Q6P3W6 841 aaKnown RBP8.64□□□□□ -1.03
PTPRD-212ENST00000488774 NBPF15Q8N660 670 aa8.64□□□□□ -1.03
PTPRD-212ENST00000488774 ARHGEF1Q92888 912 aaKnown RBP8.64□□□□□ -1.03
PTPRD-212ENST00000488774 BCL2L12Q9HB09 334 aa8.64□□□□□ -1.03
PTPRD-212ENST00000488774 SPINK5Q9NQ38 1064 aaPredicted RBP8.64□□□□□ -1.03
PTPRD-212ENST00000488774 SOS1Q07889 1333 aaPredicted RBP8.63□□□□□ -1.03
PTPRD-212ENST00000488774 CNTNAP4Q9C0A0 1308 aa8.63□□□□□ -1.03
PTPRD-212ENST00000488774 TEFQ10587 303 aa8.63□□□□□ -1.03
PTPRD-212ENST00000488774 WDR43Q15061 677 aaKnown RBP eCLIP8.63□□□□□ -1.03
PTPRD-212ENST00000488774 LAMB2P55268 1798 aa8.63□□□□□ -1.03
PTPRD-212ENST00000488774 ARFGEF2Q9Y6D5 1785 aa8.63□□□□□ -1.03
PTPRD-212ENST00000488774 MAPK8IP3Q9UPT6 1336 aa8.62□□□□□ -1.03
PTPRD-212ENST00000488774 HTATSF1O43719 755 aaKnown RBP8.62□□□□□ -1.03
PTPRD-212ENST00000488774 EIF4A1P60842 406 aaKnown RBP8.62□□□□□ -1.03
PTPRD-212ENST00000488774 TAF7Q15545 349 aaPredicted RBP8.62□□□□□ -1.03
PTPRD-212ENST00000488774 AK7Q96M32 723 aa8.62□□□□□ -1.03
PTPRD-212ENST00000488774 SALL2Q9Y467 1007 aaPredicted RBP8.62□□□□□ -1.03
PTPRD-212ENST00000488774 DLEC1Q9Y238 1755 aa8.62□□□□□ -1.03
PTPRD-212ENST00000488774 TNRC6CQ9HCJ0 1690 aaKnown RBP8.62□□□□□ -1.03
PTPRD-212ENST00000488774 CCDC88AQ3V6T2 1871 aa8.62□□□□□ -1.03
PTPRD-212ENST00000488774 RPS6KA4O75676 772 aa8.61□□□□□ -1.03
PTPRD-212ENST00000488774 ANXA1P04083 346 aa8.61□□□□□ -1.03
PTPRD-212ENST00000488774 ZNF853P0CG23 659 aa8.61□□□□□ -1.03
PTPRD-212ENST00000488774 GYS1P13807 737 aa8.61□□□□□ -1.03
PTPRD-212ENST00000488774 PROSER3Q2NL68 480 aa8.61□□□□□ -1.03
PTPRD-212ENST00000488774 RC3H1Q5TC82 1133 aaKnown RBP8.61□□□□□ -1.03
PTPRD-212ENST00000488774 LRP10Q7Z4F1 713 aa8.61□□□□□ -1.03
PTPRD-212ENST00000488774 FAM9BQ8IZU0 186 aa8.61□□□□□ -1.03
PTPRD-212ENST00000488774 RTF1Q92541 710 aaKnown RBP8.61□□□□□ -1.03
PTPRD-212ENST00000488774 MTFR1LQ9H019 292 aa8.61□□□□□ -1.03
PTPRD-212ENST00000488774 CCDC87Q9NVE4 849 aa8.61□□□□□ -1.03
PTPRD-212ENST00000488774 COL15A1P39059 1388 aa8.61□□□□□ -1.03
PTPRD-212ENST00000488774 COL4A1P02462 1669 aa8.6□□□□□ -1.03
PTPRD-212ENST00000488774 CHL1O00533 1208 aa8.6□□□□□ -1.03
PTPRD-212ENST00000488774 GIGYF1O75420 1035 aaPredicted RBP8.6□□□□□ -1.03
PTPRD-212ENST00000488774 CANXP27824 592 aaKnown RBP8.6□□□□□ -1.03
PTPRD-212ENST00000488774 DDR1Q08345 913 aa8.6□□□□□ -1.03
PTPRD-212ENST00000488774 FKBP8Q14318 412 aa8.6□□□□□ -1.03
PTPRD-212ENST00000488774 PDIA6Q15084 440 aa8.6□□□□□ -1.03
PTPRD-212ENST00000488774 NLGN2Q8NFZ4 835 aa8.6□□□□□ -1.03
PTPRD-212ENST00000488774 SPON1Q9HCB6 807 aa8.6□□□□□ -1.03
PTPRD-212ENST00000488774 MBIPQ9NS73 344 aa8.6□□□□□ -1.03
PTPRD-212ENST00000488774 CHD4Q14839 1912 aa8.59□□□□□ -1.03
PTPRD-212ENST00000488774 SSFA2P28290 1259 aa8.59□□□□□ -1.03
PTPRD-212ENST00000488774 EIF5P55010 431 aaKnown RBP8.59□□□□□ -1.03
PTPRD-212ENST00000488774 DIEXFQ68CQ4 756 aaKnown RBP8.59□□□□□ -1.03
PTPRD-212ENST00000488774 VSIG10Q8N0Z9 540 aa8.59□□□□□ -1.03
PTPRD-212ENST00000488774 TSPYL6Q8N831 410 aa8.59□□□□□ -1.03
PTPRD-212ENST00000488774 NECTIN2Q92692 538 aa8.59□□□□□ -1.03
PTPRD-212ENST00000488774 TSR2Q969E8 191 aaKnown RBP8.59□□□□□ -1.03
PTPRD-212ENST00000488774 FMNL2Q96PY5 1086 aa8.59□□□□□ -1.03
PTPRD-212ENST00000488774 FHDC1Q9C0D6 1143 aaPredicted RBP8.59□□□□□ -1.03
PTPRD-212ENST00000488774 CARMIL3Q8ND23 1372 aa8.59□□□□□ -1.03
PTPRD-212ENST00000488774 CACNA1FO60840 1977 aa8.59□□□□□ -1.03
PTPRD-212ENST00000488774 USP42Q9H9J4 1324 aaKnown RBP8.58□□□□□ -1.04
PTPRD-212ENST00000488774 SBF1O95248 1867 aa8.58□□□□□ -1.04
PTPRD-212ENST00000488774 DDX60Q8IY21 1712 aaKnown RBP8.58□□□□□ -1.04
PTPRD-212ENST00000488774 USPL1Q5W0Q7 1092 aa8.58□□□□□ -1.04
PTPRD-212ENST00000488774 TTLL7Q6ZT98 887 aa8.58□□□□□ -1.04
PTPRD-212ENST00000488774 WWC1Q8IX03 1113 aa8.58□□□□□ -1.04
PTPRD-212ENST00000488774 TTC5Q8N0Z6 440 aa8.58□□□□□ -1.04
PTPRD-212ENST00000488774 C8orf58Q8NAV2 365 aa8.58□□□□□ -1.04
PTPRD-212ENST00000488774 TSPYL4Q9UJ04 414 aa8.58□□□□□ -1.04
PTPRD-212ENST00000488774 TBC1D2BQ9UPU7 963 aa8.58□□□□□ -1.04
PTPRD-212ENST00000488774 RTCBQ9Y3I0 505 aaKnown RBP8.58□□□□□ -1.04
PTPRD-212ENST00000488774 LAS1LQ9Y4W2 734 aaKnown RBP8.58□□□□□ -1.04
PTPRD-212ENST00000488774 ARFGEF1Q9Y6D6 1849 aa8.58□□□□□ -1.04
PTPRD-212ENST00000488774 ZNF521Q96K83 1311 aa8.57□□□□□ -1.04
PTPRD-212ENST00000488774 SLX4Q8IY92 1834 aa8.57□□□□□ -1.04
PTPRD-212ENST00000488774 DCAF8L1A6NGE4 600 aa8.57□□□□□ -1.04
PTPRD-212ENST00000488774 CAMTA2O94983 1202 aa8.57□□□□□ -1.04
PTPRD-212ENST00000488774 HLFQ16534 295 aa8.57□□□□□ -1.04
PTPRD-212ENST00000488774 TRAPPC3LQ5T215 181 aa8.57□□□□□ -1.04
PTPRD-212ENST00000488774 SLC51AQ86UW1 340 aa8.57□□□□□ -1.04
PTPRD-212ENST00000488774 CCDC24Q8N4L8 307 aa8.57□□□□□ -1.04
PTPRD-212ENST00000488774 ZNF428Q96B54 188 aa8.57□□□□□ -1.04
PTPRD-212ENST00000488774 WWC3Q9ULE0 1092 aa8.57□□□□□ -1.04
PTPRD-212ENST00000488774 ELL2O00472 640 aaPredicted RBP8.56□□□□□ -1.04
PTPRD-212ENST00000488774 MMP10P09238 476 aa8.56□□□□□ -1.04
PTPRD-212ENST00000488774 SNRPA1P09661 255 aaKnown RBP8.56□□□□□ -1.04
PTPRD-212ENST00000488774 TM4SF1P30408 202 aa8.56□□□□□ -1.04
PTPRD-212ENST00000488774 TBC1D9BQ66K14 1250 aa8.56□□□□□ -1.04
PTPRD-212ENST00000488774 ARXQ96QS3 562 aa8.56□□□□□ -1.04
PTPRD-212ENST00000488774 SYT17Q9BSW7 474 aa8.56□□□□□ -1.04
PTPRD-212ENST00000488774 C10orf71Q711Q0 1435 aa8.55□□□□□ -1.04
PTPRD-212ENST00000488774 SPEF2Q9C093 1822 aa8.55□□□□□ -1.04
PTPRD-212ENST00000488774 POLRMTO00411 1230 aaKnown RBP8.55□□□□□ -1.04
PTPRD-212ENST00000488774 TCERG1O14776 1098 aaKnown RBP8.55□□□□□ -1.04
PTPRD-212ENST00000488774 MYL6BP14649 208 aa8.55□□□□□ -1.04
PTPRD-212ENST00000488774 NFIXQ14938 502 aa8.55□□□□□ -1.04
PTPRD-212ENST00000488774 NGEFQ8N5V2 710 aa8.55□□□□□ -1.04
PTPRD-212ENST00000488774 SLC16A10Q8TF71 515 aa8.55□□□□□ -1.04
PTPRD-212ENST00000488774 CFAP44Q96MT7 982 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms