RNA–Protein interactions for RNA: ENST00000434172.2

CKS1BP5-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 5, humanhuman

BASIC

Gene CKS1BP5, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP5-201ENST00000434172 SPG7Q9UQ90 795 aa5.42□□□□□ -1.54
CKS1BP5-201ENST00000434172 ZBTB24O43167 697 aaPredicted RBP5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 GPR153Q6NV75 609 aa5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 RNF19BQ6ZMZ0 732 aa5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 SH3BP5LQ7L8J4 393 aa5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 LRP10Q7Z4F1 713 aa5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 SEPT12Q8IYM1 358 aa5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 GJD3Q8N144 294 aa5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 GPRASP2Q96D09 838 aa5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 RNF19AQ9NV58 838 aa5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 CCDC87Q9NVE4 849 aa5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 EVA1BQ9NVM1 165 aa5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 DDX56Q9NY93 547 aaKnown RBP5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 SIRPGQ9P1W8 387 aa5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 PCDHGB7Q9Y5F8 929 aa5.41□□□□□ -1.54
CKS1BP5-201ENST00000434172 MAP4K4O95819 1239 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP5-201ENST00000434172 MYCP01106 439 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP5-201ENST00000434172 CTSHP09668 335 aa5.4□□□□□ -1.54
CKS1BP5-201ENST00000434172 TMED8Q6PL24 325 aaPredicted RBP5.4□□□□□ -1.54
CKS1BP5-201ENST00000434172 RPUSD2Q8IZ73 545 aaKnown RBP5.4□□□□□ -1.54
CKS1BP5-201ENST00000434172 RASGRP4Q8TDF6 673 aa5.4□□□□□ -1.54
CKS1BP5-201ENST00000434172 KHSRPQ92945 711 aaKnown RBP eCLIP5.4□□□□□ -1.54
CKS1BP5-201ENST00000434172 SEC16BQ96JE7 1060 aa5.4□□□□□ -1.54
CKS1BP5-201ENST00000434172 ZBED2Q9BTP6 218 aa5.4□□□□□ -1.54
CKS1BP5-201ENST00000434172 GEMIN8Q9NWZ8 242 aaKnown RBP5.4□□□□□ -1.54
CKS1BP5-201ENST00000434172 PCDH10Q9P2E7 1040 aa5.4□□□□□ -1.54
CKS1BP5-201ENST00000434172 WASLO00401 505 aaPredicted RBP5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 BACH1O14867 736 aa5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 GIPC1O14908 333 aa5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 PEX14O75381 377 aa5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 LGR5O75473 907 aa5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 NEFLP07196 543 aa5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 EIF4BP23588 611 aaKnown RBP5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 ARSHQ5FYA8 562 aa5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 BLOC1S3Q6QNY0 202 aa5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 STAG2Q8N3U4 1231 aa5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 RNPC3Q96LT9 517 aaKnown RBP5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 KCNK17Q96T54 332 aa5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 NIF3L1Q9GZT8 377 aa5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 UBA5Q9GZZ9 404 aa5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 ZNF358Q9NW07 568 aa5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 GGT7Q9UJ14 662 aa5.39□□□□□ -1.55
CKS1BP5-201ENST00000434172 POTEFA5A3E0 1075 aa5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 GIGYF1O75420 1035 aaPredicted RBP5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 ST13P50502 369 aaKnown RBP5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 NFX1Q12986 1120 aaKnown RBP5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 PAK2Q13177 524 aa5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 PUS10Q3MIT2 529 aaKnown RBP5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 MSS51Q4VC12 460 aa5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 SAMD7Q7Z3H4 446 aa5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 LAPTM4BQ86VI4 370 aa5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 SCG3Q8WXD2 468 aaKnown RBP5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 RELTQ969Z4 430 aa5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 CSRNP1Q96S65 589 aa5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 SETDB2Q96T68 719 aa5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 NUDT12Q9BQG2 462 aa5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 SLC4A5Q9BY07 1137 aa5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 DNAJC25Q9H1X3 360 aa5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 CDV3Q9UKY7 258 aaKnown RBP5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 STRIP2Q9ULQ0 834 aa5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 PCDHB11Q9Y5F2 797 aa5.38□□□□□ -1.55
CKS1BP5-201ENST00000434172 TNFRSF10BO14763 440 aa5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 RNF40O75150 1001 aa5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 CDC45O75419 566 aa5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 DXOO77932 396 aaKnown RBP5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 MZF1P28698 734 aaPredicted RBP5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 CCDC146Q8IYE0 955 aa5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 TRIM52Q96A61 297 aa5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 THAP11Q96EK4 314 aa5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 SLC10A4Q96EP9 437 aa5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 SRPK1Q96SB4 655 aaKnown RBP5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 CFHR5Q9BXR6 569 aa5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 SEPT9Q9UHD8 586 aaPredicted RBP5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 ERBB3P21860 1342 aa5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 ATAD2Q6PL18 1390 aa5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 USP31Q70CQ4 1352 aa5.37□□□□□ -1.55
CKS1BP5-201ENST00000434172 NR1I2O75469 434 aa5.36□□□□□ -1.55
CKS1BP5-201ENST00000434172 SSBP05455 408 aaKnown RBP eCLIP5.36□□□□□ -1.55
CKS1BP5-201ENST00000434172 HOXB3P14651 431 aaPredicted RBP5.36□□□□□ -1.55
CKS1BP5-201ENST00000434172 TBX4P57082 545 aa5.36□□□□□ -1.55
CKS1BP5-201ENST00000434172 SH3RF1Q7Z6J0 888 aa5.36□□□□□ -1.55
CKS1BP5-201ENST00000434172 PRPF38AQ8NAV1 312 aaKnown RBP5.36□□□□□ -1.55
CKS1BP5-201ENST00000434172 STAG1Q8WVM7 1258 aa5.36□□□□□ -1.55
CKS1BP5-201ENST00000434172 MYO19Q96H55 970 aa5.36□□□□□ -1.55
CKS1BP5-201ENST00000434172 TRIM55Q9BYV6 548 aa5.36□□□□□ -1.55
CKS1BP5-201ENST00000434172 SAP130Q9H0E3 1048 aa5.36□□□□□ -1.55
CKS1BP5-201ENST00000434172 CREB3O43889 395 aa5.35□□□□□ -1.55
CKS1BP5-201ENST00000434172 PDGFRBP09619 1106 aa5.35□□□□□ -1.55
CKS1BP5-201ENST00000434172 EPHA4P54764 986 aa5.35□□□□□ -1.55
CKS1BP5-201ENST00000434172 TAF1CQ15572 869 aaPredicted RBP5.35□□□□□ -1.55
CKS1BP5-201ENST00000434172 ERFEQ4G0M1 354 aa5.35□□□□□ -1.55
CKS1BP5-201ENST00000434172 COX20Q5RI15 118 aa5.35□□□□□ -1.55
CKS1BP5-201ENST00000434172 ERMP1Q7Z2K6 904 aa5.35□□□□□ -1.55
CKS1BP5-201ENST00000434172 PMM1Q92871 262 aa5.35□□□□□ -1.55
CKS1BP5-201ENST00000434172 CEP89Q96ST8 783 aa5.35□□□□□ -1.55
CKS1BP5-201ENST00000434172 METRNQ9UJH8 293 aa5.35□□□□□ -1.55
CKS1BP5-201ENST00000434172 TMEM229AB2RXF0 380 aa5.34□□□□□ -1.55
CKS1BP5-201ENST00000434172 PRC1O43663 620 aa5.34□□□□□ -1.55
CKS1BP5-201ENST00000434172 PCSK2P16519 638 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms