RNA–Protein interactions for RNA: ENST00000264933.8

PDCD6-201, Transcript of programmed cell death 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDCD6, Length 1,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-201ENST00000264933 GNAI1P63096 354 aa17.48■□□□□ 0.39
PDCD6-201ENST00000264933 COL23A1Q86Y22 540 aaPredicted RBP17.48■□□□□ 0.39
PDCD6-201ENST00000264933 MBIPQ9NS73 344 aa17.48■□□□□ 0.39
PDCD6-201ENST00000264933 TSPYL4Q9UJ04 414 aa17.48■□□□□ 0.39
PDCD6-201ENST00000264933 HNRNPUQ00839 825 aaKnown RBP eCLIP17.47■□□□□ 0.39
PDCD6-201ENST00000264933 RBM42Q9BTD8 480 aaKnown RBP17.47■□□□□ 0.39
PDCD6-201ENST00000264933 LAS1LQ9Y4W2 734 aaKnown RBP17.47■□□□□ 0.39
PDCD6-201ENST00000264933 PRAMEF22A3QJZ6 481 aa17.46■□□□□ 0.39
PDCD6-201ENST00000264933 ATP6V1AP38606 617 aa17.46■□□□□ 0.39
PDCD6-201ENST00000264933 CALD1Q05682 793 aaKnown RBP17.46■□□□□ 0.39
PDCD6-201ENST00000264933 AMIGO3Q86WK7 504 aa17.46■□□□□ 0.39
PDCD6-201ENST00000264933 TTC5Q8N0Z6 440 aa17.46■□□□□ 0.39
PDCD6-201ENST00000264933 VSIG10Q8N0Z9 540 aa17.46■□□□□ 0.39
PDCD6-201ENST00000264933 C4BP0C0L5 1744 aa17.45■□□□□ 0.38
PDCD6-201ENST00000264933 KRT24Q2M2I5 525 aa17.45■□□□□ 0.38
PDCD6-201ENST00000264933 TRMT2AQ8IZ69 625 aaKnown RBP17.45■□□□□ 0.38
PDCD6-201ENST00000264933 LINC00116Q8NCU8 138 aa17.45■□□□□ 0.38
PDCD6-201ENST00000264933 CDCA7LQ96GN5 454 aa17.45■□□□□ 0.38
PDCD6-201ENST00000264933 FMNL2Q96PY5 1086 aa17.45■□□□□ 0.38
PDCD6-201ENST00000264933 LAMB4A4D0S4 1761 aa17.45■□□□□ 0.38
PDCD6-201ENST00000264933 UBR3Q6ZT12 1888 aa17.44■□□□□ 0.38
PDCD6-201ENST00000264933 POLD1P28340 1107 aa17.44■□□□□ 0.38
PDCD6-201ENST00000264933 DNAJC10Q8IXB1 793 aa17.44■□□□□ 0.38
PDCD6-201ENST00000264933 TSR2Q969E8 191 aaKnown RBP17.44■□□□□ 0.38
PDCD6-201ENST00000264933 GIGYF1O75420 1035 aaPredicted RBP17.43■□□□□ 0.38
PDCD6-201ENST00000264933 GOLGA2Q08379 1002 aa17.43■□□□□ 0.38
PDCD6-201ENST00000264933 SLFN5Q08AF3 891 aa17.43■□□□□ 0.38
PDCD6-201ENST00000264933 NLGN2Q8NFZ4 835 aa17.43■□□□□ 0.38
PDCD6-201ENST00000264933 USP16Q9Y5T5 823 aa17.43■□□□□ 0.38
PDCD6-201ENST00000264933 ZNF784Q8NCA9 323 aaPredicted RBP17.42■□□□□ 0.38
PDCD6-201ENST00000264933 ZBED9Q6R2W3 1325 aa17.42■□□□□ 0.38
PDCD6-201ENST00000264933 FANCIQ9NVI1 1328 aa17.42■□□□□ 0.38
PDCD6-201ENST00000264933 SNRPA1P09661 255 aaKnown RBP17.41■□□□□ 0.38
PDCD6-201ENST00000264933 CYP19A1P11511 503 aaPredicted RBP17.41■□□□□ 0.38
PDCD6-201ENST00000264933 MSL1Q68DK7 614 aa17.41■□□□□ 0.38
PDCD6-201ENST00000264933 C8orf58Q8NAV2 365 aa17.41■□□□□ 0.38
PDCD6-201ENST00000264933 SMIM5Q71RC9 77 aa17.4■□□□□ 0.38
PDCD6-201ENST00000264933 KLHL34Q8N239 644 aa17.4■□□□□ 0.38
PDCD6-201ENST00000264933 RC3H1Q5TC82 1133 aaKnown RBP17.39■□□□□ 0.37
PDCD6-201ENST00000264933 INTS5Q6P9B9 1019 aaKnown RBP17.39■□□□□ 0.37
PDCD6-201ENST00000264933 TSPYL6Q8N831 410 aa17.39■□□□□ 0.37
PDCD6-201ENST00000264933 E9PSI1 815 aa17.38■□□□□ 0.37
PDCD6-201ENST00000264933 DUSP27Q5VZP5 1158 aa17.38■□□□□ 0.37
PDCD6-201ENST00000264933 TEX13AQ9BXU3 409 aaPredicted RBP17.38■□□□□ 0.37
PDCD6-201ENST00000264933 CNTNAP4Q9C0A0 1308 aa17.38■□□□□ 0.37
PDCD6-201ENST00000264933 CRKLP46109 303 aaKnown RBP17.37■□□□□ 0.37
PDCD6-201ENST00000264933 EXOSC9Q06265 439 aaKnown RBP17.37■□□□□ 0.37
PDCD6-201ENST00000264933 CHD4Q14839 1912 aa17.37■□□□□ 0.37
PDCD6-201ENST00000264933 A1BGP04217 495 aa17.36■□□□□ 0.37
PDCD6-201ENST00000264933 YBX3P16989 372 aaKnown RBP eCLIP17.36■□□□□ 0.371e-8■□□□□ 8.4
PDCD6-201ENST00000264933 GPR162Q16538 588 aa17.36■□□□□ 0.37
PDCD6-201ENST00000264933 MYH16Q9H6N6 1097 aa17.36■□□□□ 0.37
PDCD6-201ENST00000264933 CACNA1FO60840 1977 aa17.36■□□□□ 0.37
PDCD6-201ENST00000264933 NBPF26B4DH59 902 aa17.35■□□□□ 0.37
PDCD6-201ENST00000264933 ELL2O00472 640 aaPredicted RBP17.35■□□□□ 0.37
PDCD6-201ENST00000264933 VAMP4O75379 141 aa17.35■□□□□ 0.37
PDCD6-201ENST00000264933 HOXB7P09629 217 aa17.35■□□□□ 0.37
PDCD6-201ENST00000264933 PDIA6Q15084 440 aa17.35■□□□□ 0.37
PDCD6-201ENST00000264933 NBPF10Q6P3W6 841 aaKnown RBP17.35■□□□□ 0.37
PDCD6-201ENST00000264933 NBPF15Q8N660 670 aa17.35■□□□□ 0.37
PDCD6-201ENST00000264933 FLAD1Q8NFF5 587 aa17.35■□□□□ 0.37
PDCD6-201ENST00000264933 AK7Q96M32 723 aa17.35■□□□□ 0.37
PDCD6-201ENST00000264933 ZBTB1Q9Y2K1 713 aa17.35■□□□□ 0.37
PDCD6-201ENST00000264933 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.34■□□□□ 0.37
PDCD6-201ENST00000264933 RPS6KA4O75676 772 aa17.34■□□□□ 0.37
PDCD6-201ENST00000264933 C4AP0C0L4 1744 aa17.34■□□□□ 0.37
PDCD6-201ENST00000264933 CCDC87Q9NVE4 849 aa17.34■□□□□ 0.37
PDCD6-201ENST00000264933 PHF14O94880 888 aa17.33■□□□□ 0.36
PDCD6-201ENST00000264933 STARD3NLO95772 234 aa17.33■□□□□ 0.36
PDCD6-201ENST00000264933 PIP4K2AP48426 406 aaPredicted RBP17.33■□□□□ 0.36
PDCD6-201ENST00000264933 LRP10Q7Z4F1 713 aa17.33■□□□□ 0.36
PDCD6-201ENST00000264933 EIF2S2P20042 333 aaKnown RBP17.32■□□□□ 0.36
PDCD6-201ENST00000264933 HMGB2P26583 209 aaKnown RBP17.32■□□□□ 0.36
PDCD6-201ENST00000264933 SSFA2P28290 1259 aa17.32■□□□□ 0.36
PDCD6-201ENST00000264933 EIF5P55010 431 aaKnown RBP17.32■□□□□ 0.36
PDCD6-201ENST00000264933 TWISTNBQ3B726 338 aaPredicted RBP17.32■□□□□ 0.36
PDCD6-201ENST00000264933 PELP1Q8IZL8 1130 aaKnown RBP17.32■□□□□ 0.36
PDCD6-201ENST00000264933 SOS1Q07889 1333 aaPredicted RBP17.31■□□□□ 0.36
PDCD6-201ENST00000264933 YTHDC1Q96MU7 727 aaKnown RBP17.31■□□□□ 0.36
PDCD6-201ENST00000264933 CD2APQ9Y5K6 639 aa17.31■□□□□ 0.36
PDCD6-201ENST00000264933 GNPATO15228 680 aa17.3■□□□□ 0.36
PDCD6-201ENST00000264933 CANXP27824 592 aaKnown RBP17.3■□□□□ 0.36
PDCD6-201ENST00000264933 IL6STP40189 918 aaPredicted RBP17.3■□□□□ 0.36
PDCD6-201ENST00000264933 PROSER3Q2NL68 480 aa17.3■□□□□ 0.36
PDCD6-201ENST00000264933 NECTIN2Q92692 538 aa17.3■□□□□ 0.36
PDCD6-201ENST00000264933 ERBB4Q15303 1308 aa17.29■□□□□ 0.36
PDCD6-201ENST00000264933 ANXA1P04083 346 aa17.29■□□□□ 0.36
PDCD6-201ENST00000264933 HDGFL1Q5TGJ6 251 aa17.29■□□□□ 0.36
PDCD6-201ENST00000264933 RTCBQ9Y3I0 505 aaKnown RBP17.29■□□□□ 0.36
PDCD6-201ENST00000264933 ARHGEF1Q92888 912 aaKnown RBP17.28■□□□□ 0.36
PDCD6-201ENST00000264933 NUP98P52948 1817 aa17.27■□□□□ 0.36
PDCD6-201ENST00000264933 DDX21Q9NR30 783 aaKnown RBP eCLIP17.27■□□□□ 0.36
PDCD6-201ENST00000264933 CHPF2Q9P2E5 772 aa17.27■□□□□ 0.36
PDCD6-201ENST00000264933 BCORQ6W2J9 1755 aa17.27■□□□□ 0.35
PDCD6-201ENST00000264933 TCERG1O14776 1098 aaKnown RBP17.26■□□□□ 0.35
PDCD6-201ENST00000264933 TRAPPC3LQ5T215 181 aa17.26■□□□□ 0.35
PDCD6-201ENST00000264933 COL15A1P39059 1388 aa17.26■□□□□ 0.35
PDCD6-201ENST00000264933 GRIN3BO60391 1043 aa17.25■□□□□ 0.35
PDCD6-201ENST00000264933 MYL6BP14649 208 aa17.25■□□□□ 0.35
PDCD6-201ENST00000264933 DBF4Q9UBU7 674 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms