RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Echdc1Q9D9V3 322 aa25.37■■□□□ 1.65
Lig3-209ENSMUST00000173009 Irf9Q61179 399 aa25.36■■□□□ 1.65
Lig3-209ENSMUST00000173009 Lrrc43Q3V0L5 667 aa25.36■■□□□ 1.65
Lig3-209ENSMUST00000173009 Rapgef4Q9EQZ6 1011 aa25.35■■□□□ 1.65
Lig3-209ENSMUST00000173009 Ezh2Q61188 746 aaKnown RBP25.34■■□□□ 1.65
Lig3-209ENSMUST00000173009 Strn4P58404 760 aa25.33■■□□□ 1.65
Lig3-209ENSMUST00000173009 Ankle2Q6P1H6 964 aa25.33■■□□□ 1.65
Lig3-209ENSMUST00000173009 Ppp1r3fQ9JIG4 799 aa25.33■■□□□ 1.65
Lig3-209ENSMUST00000173009 Disp3A3KFU9 1347 aa25.33■■□□□ 1.65
Lig3-209ENSMUST00000173009 Hspa2P17156 633 aa25.33■■□□□ 1.65
Lig3-209ENSMUST00000173009 Nutm1Q8BHP2 1126 aa25.33■■□□□ 1.65
Lig3-209ENSMUST00000173009 MeiocA2AG06 965 aa25.32■■□□□ 1.64
Lig3-209ENSMUST00000173009 Pank1Q8K4K6 548 aa25.32■■□□□ 1.64
Lig3-209ENSMUST00000173009 Prr5lA2AVJ5 370 aa25.31■■□□□ 1.64
Lig3-209ENSMUST00000173009 Aldh1l1Q8R0Y6 902 aa25.31■■□□□ 1.64
Lig3-209ENSMUST00000173009 RtcbQ99LF4 505 aaKnown RBP25.31■■□□□ 1.64
Lig3-209ENSMUST00000173009 Trim58Q5NCC9 485 aa25.3■■□□□ 1.64
Lig3-209ENSMUST00000173009 Trip6Q9Z1Y4 480 aa25.3■■□□□ 1.64
Lig3-209ENSMUST00000173009 Flt4P35917 1363 aa25.3■■□□□ 1.64
Lig3-209ENSMUST00000173009 Map3k2Q61083 619 aa25.29■■□□□ 1.64
Lig3-209ENSMUST00000173009 Bicc1Q99MQ1 977 aaKnown RBP25.29■■□□□ 1.64
Lig3-209ENSMUST00000173009 Nsfl1cQ9CZ44 370 aaKnown RBP25.29■■□□□ 1.64
Lig3-209ENSMUST00000173009 Kif23E9Q5G3 953 aa25.28■■□□□ 1.64
Lig3-209ENSMUST00000173009 Exoc6bA6H5Z3 810 aa25.28■■□□□ 1.64
Lig3-209ENSMUST00000173009 Esco1Q69Z69 843 aa25.28■■□□□ 1.64
Lig3-209ENSMUST00000173009 C4bP01029 1738 aa25.27■■□□□ 1.64
Lig3-209ENSMUST00000173009 Prr29B1ARI9 187 aa25.26■■□□□ 1.63
Lig3-209ENSMUST00000173009 NppbP40753 121 aa25.26■■□□□ 1.63
Lig3-209ENSMUST00000173009 HmcesQ8R1M0 353 aaKnown RBP25.26■■□□□ 1.63
Lig3-209ENSMUST00000173009 Atp1b3P97370 278 aa25.26■■□□□ 1.63
Lig3-209ENSMUST00000173009 Zbtb40Q6PCS8 1258 aa25.26■■□□□ 1.63
Lig3-209ENSMUST00000173009 Gnl3lQ6PGG6 577 aaKnown RBP25.26■■□□□ 1.63
Lig3-209ENSMUST00000173009 Sumf1Q8R0F3 372 aa25.26■■□□□ 1.63
Lig3-209ENSMUST00000173009 Nlrp3Q8R4B8 1033 aa25.26■■□□□ 1.63
Lig3-209ENSMUST00000173009 Ccdc85cE9Q6B2 420 aa25.25■■□□□ 1.63
Lig3-209ENSMUST00000173009 Jdp2P97875 163 aa25.25■■□□□ 1.63
Lig3-209ENSMUST00000173009 Maco1Q7TQE6 664 aaKnown RBP25.25■■□□□ 1.63
Lig3-209ENSMUST00000173009 Adam1aQ60813 791 aa25.24■■□□□ 1.63
Lig3-209ENSMUST00000173009 Slf2Q6P9P0 1278 aa25.23■■□□□ 1.63
Lig3-209ENSMUST00000173009 Srp68Q8BMA6 625 aaKnown RBP25.23■■□□□ 1.63
Lig3-209ENSMUST00000173009 Akt1s1Q9D1F4 257 aa25.23■■□□□ 1.63
Lig3-209ENSMUST00000173009 Mphosph10Q810V0 681 aaKnown RBP25.21■■□□□ 1.63
Lig3-209ENSMUST00000173009 Amhr2Q8K592 568 aa25.21■■□□□ 1.63
Lig3-209ENSMUST00000173009 MypnQ5DTJ9 1315 aa25.21■■□□□ 1.63
Lig3-209ENSMUST00000173009 Msl1Q6PDM1 616 aa25.21■■□□□ 1.63
Lig3-209ENSMUST00000173009 Ppm1mQ8BU27 406 aa25.21■■□□□ 1.63
Lig3-209ENSMUST00000173009 Dpf1Q9QX66 387 aa25.21■■□□□ 1.63
Lig3-209ENSMUST00000173009 Bend3Q6PAL0 825 aa25.2■■□□□ 1.62
Lig3-209ENSMUST00000173009 Zap70P43404 618 aa25.19■■□□□ 1.62
Lig3-209ENSMUST00000173009 Tlr8P58682 1032 aa25.19■■□□□ 1.62
Lig3-209ENSMUST00000173009 Ankib1Q6ZPS6 1085 aa25.19■■□□□ 1.62
Lig3-209ENSMUST00000173009 Snai1Q02085 264 aa25.18■■□□□ 1.62
Lig3-209ENSMUST00000173009 Ssc5dQ8BV57 1371 aa25.18■■□□□ 1.62
Lig3-209ENSMUST00000173009 Ddx60E9PZQ1 1711 aa25.17■■□□□ 1.62
Lig3-209ENSMUST00000173009 Ifit1bl2Q3U687 466 aa25.17■■□□□ 1.62
Lig3-209ENSMUST00000173009 Chrna2Q91X60 512 aa25.17■■□□□ 1.62
Lig3-209ENSMUST00000173009 Spata31d1bE9QA57 1361 aa25.16■■□□□ 1.62
Lig3-209ENSMUST00000173009 HellsQ60848 821 aa25.16■■□□□ 1.62
Lig3-209ENSMUST00000173009 Ddx58Q6Q899 926 aa25.16■■□□□ 1.62
Lig3-209ENSMUST00000173009 Ltb4r2Q9JJL9 360 aa25.16■■□□□ 1.62
Lig3-209ENSMUST00000173009 Cfdp1O88271 295 aaKnown RBP25.16■■□□□ 1.62
Lig3-209ENSMUST00000173009 Ubr3Q5U430 1889 aa25.16■■□□□ 1.62
Lig3-209ENSMUST00000173009 Tspyl2Q7TQI8 677 aa25.16■■□□□ 1.62
Lig3-209ENSMUST00000173009 Map3k13Q1HKZ5 959 aa25.15■■□□□ 1.62
Lig3-209ENSMUST00000173009 SowahdQ8BY98 327 aa25.15■■□□□ 1.62
Lig3-209ENSMUST00000173009 NgdnQ9DB96 315 aaKnown RBP25.15■■□□□ 1.62
Lig3-209ENSMUST00000173009 Fkbp5Q64378 456 aa25.14■■□□□ 1.62
Lig3-209ENSMUST00000173009 CpzQ8R4V4 654 aa25.14■■□□□ 1.62
Lig3-209ENSMUST00000173009 Tktl2Q9D4D4 627 aa25.14■■□□□ 1.62
Lig3-209ENSMUST00000173009 MvpQ9EQK5 861 aa25.14■■□□□ 1.62
Lig3-209ENSMUST00000173009 Ankrd44B2RXR6 993 aa25.13■■□□□ 1.61
Lig3-209ENSMUST00000173009 AK157302I3ITR1 129 aa25.13■■□□□ 1.61
Lig3-209ENSMUST00000173009 Isca1Q9D924 129 aa25.13■■□□□ 1.61
Lig3-209ENSMUST00000173009 Tnnt3Q9QZ47 272 aa25.13■■□□□ 1.61
Lig3-209ENSMUST00000173009 Sipa1l3G3X9J0 1776 aa25.13■■□□□ 1.61
Lig3-209ENSMUST00000173009 Lmbr1lQ9D1E5 489 aa25.13■■□□□ 1.61
Lig3-209ENSMUST00000173009 Myd88P22366 296 aa25.12■■□□□ 1.61
Lig3-209ENSMUST00000173009 AbraQ8BUZ1 375 aa25.11■■□□□ 1.61
Lig3-209ENSMUST00000173009 Fkbp1aP26883 108 aaKnown RBP25.1■■□□□ 1.61
Lig3-209ENSMUST00000173009 Trim34aQ99PP6 485 aa25.1■■□□□ 1.61
Lig3-209ENSMUST00000173009 Ubn2Q80WC1 1314 aa25.1■■□□□ 1.61
Lig3-209ENSMUST00000173009 Zfyve9A2A8R0 1397 aa25.1■■□□□ 1.61
Lig3-209ENSMUST00000173009 NmiO35309 314 aa25.1■■□□□ 1.61
Lig3-209ENSMUST00000173009 Phf23Q8BSN5 401 aa25.1■■□□□ 1.61
Lig3-209ENSMUST00000173009 Col23a1Q8K4G2 532 aa25.1■■□□□ 1.61
Lig3-209ENSMUST00000173009 Cyp2c23E9Q5K4 494 aa25.09■■□□□ 1.61
Lig3-209ENSMUST00000173009 Dctn1O08788 1281 aa25.09■■□□□ 1.61
Lig3-209ENSMUST00000173009 Rbm26Q6NZN0 1012 aaKnown RBP25.09■■□□□ 1.61
Lig3-209ENSMUST00000173009 Ripor2Q80U16 1078 aa25.09■■□□□ 1.61
Lig3-209ENSMUST00000173009 Soga3Q6NZL0 945 aa25.08■■□□□ 1.61
Lig3-209ENSMUST00000173009 Mapk8ip1Q9WVI9 707 aa25.08■■□□□ 1.61
Lig3-209ENSMUST00000173009 Col11a2Q64739 1736 aa25.08■■□□□ 1.61
Lig3-209ENSMUST00000173009 Kdm2bQ6P1G2 1309 aa25.08■■□□□ 1.6
Lig3-209ENSMUST00000173009 Cwc25Q9DBF7 416 aa25.08■■□□□ 1.6
Lig3-209ENSMUST00000173009 IncenpQ9WU62 880 aa25.08■■□□□ 1.6
Lig3-209ENSMUST00000173009 Zc3h12cQ5DTV4 884 aa25.07■■□□□ 1.6
Lig3-209ENSMUST00000173009 Stard3nlQ9DCI3 235 aa25.07■■□□□ 1.6
Lig3-209ENSMUST00000173009 VirmaA2AIV2 1811 aaKnown RBP25.07■■□□□ 1.6
Lig3-209ENSMUST00000173009 Lama4P97927 1816 aa25.07■■□□□ 1.6
Lig3-209ENSMUST00000173009 Ank1Q02357 1862 aa25.06■■□□□ 1.6
Retrieved 100 of 22,080 RNA–protein pairs in 67.7 ms