RNA–Protein interactions for RNA: ENSMUST00000111438.1

Ddx55-202, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

TSL 2 BASIC

Gene Ddx55, Length 2,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-202ENSMUST00000111438 Pde4dQ01063 747 aa15.5■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Kiaa0319lQ8K135 1048 aa15.5■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Ccdc9Q8VC31 543 aaKnown RBP15.5■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Echdc1Q9D9V3 322 aa15.5■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Igfbp6P47880 238 aa15.49■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Trim52Q8CDV4 233 aa15.49■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Znf330Q922H9 316 aa15.49■□□□□ 0.07
Ddx55-202ENSMUST00000111438 MetP16056 1379 aa15.49■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Syde2E9PUP1 1314 aa15.49■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Gm12185Q5NCB2 835 aa15.49■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Ddx60E9PZQ1 1711 aa15.48■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Slc39a6Q8C145 765 aa15.48■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Sugp2Q8CH09 1067 aa15.48■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Hsp90aa1P07901 733 aaKnown RBP15.47■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Phf23Q8BSN5 401 aa15.47■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Casz1Q9CWL2 1761 aa15.47■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Tspyl2Q7TQI8 677 aa15.47■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Nutm1Q8BHP2 1126 aa15.47■□□□□ 0.07
Ddx55-202ENSMUST00000111438 MvpQ9EQK5 861 aa15.46■□□□□ 0.07
Ddx55-202ENSMUST00000111438 Adamtsl1Q8BLI0 1745 aa15.46■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Irf9Q61179 399 aa15.45■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Ank1Q02357 1862 aa15.45■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Ankrd44B2RXR6 993 aa15.45■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Clcn1Q64347 994 aa15.45■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Gigyf1Q99MR1 1044 aaKnown RBP15.45■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Lama4P97927 1816 aa15.45■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Ttll7A4Q9F0 912 aa15.45■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Ubap1lG3UW59 384 aa15.44■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Slc4a3P16283 1227 aa15.44■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Vars2Q3U2A8 1060 aa15.44■□□□□ 0.06
Ddx55-202ENSMUST00000111438 AampJ3QN89 436 aa15.43■□□□□ 0.06
Ddx55-202ENSMUST00000111438 NeflP08551 543 aa15.43■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Ankle2Q6P1H6 964 aa15.43■□□□□ 0.06
Ddx55-202ENSMUST00000111438 CoblQ5NBX1 1337 aaKnown RBP15.43■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Prkrip1Q9CWV6 186 aaKnown RBP15.43■□□□□ 0.06
Ddx55-202ENSMUST00000111438 MpndQ3TV65 487 aa15.42■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Aldh1l2Q8K009 923 aa15.42■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Zbtb1Q91VL9 713 aa15.42■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Ipo9Q91YE6 1041 aa15.42■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Kcnh8P59111 1102 aa15.42■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Ipo4Q8VI75 1082 aa15.42■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Duxf3A0A0N4SV92 674 aa15.41■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Bicdl1A0JNT9 577 aa15.41■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Map3k2Q61083 619 aa15.41■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Miga2Q8BK03 593 aa15.41■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Ppm1mQ8BU27 406 aa15.41■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Arap2Q8BZ05 1703 aa15.41■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Bend3Q6PAL0 825 aa15.41■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Bicc1Q99MQ1 977 aaKnown RBP15.41■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Nip7Q9CXK8 180 aaKnown RBP15.41■□□□□ 0.06
Ddx55-202ENSMUST00000111438 HellsQ60848 821 aa15.4■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Snapc4Q8BP86 1333 aa15.4■□□□□ 0.06
Ddx55-202ENSMUST00000111438 Zbtb40Q6PCS8 1258 aa15.39■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Ubr3Q5U430 1889 aa15.39■□□□□ 0.05
Ddx55-202ENSMUST00000111438 MypnQ5DTJ9 1315 aa15.39■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Exoc6bA6H5Z3 810 aa15.38■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Smarcc1P97496 1104 aa15.38■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Gm13023A2A8N2 498 aa15.38■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Hspa2P17156 633 aa15.38■□□□□ 0.05
Ddx55-202ENSMUST00000111438 GapdhsQ64467 440 aa15.38■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Chmp4bQ9D8B3 224 aaKnown RBP15.37■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Rgs17Q9QZB0 210 aa15.37■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Ssc5dQ8BV57 1371 aa15.37■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Prr29B1ARI9 187 aa15.37■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Ccdc6D3YZP9 469 aa15.37■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Hmgb2P30681 210 aaKnown RBP15.37■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Mrc1Q61830 1456 aa15.36■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Ankrd31A0A140LI88 1765 aa15.36■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Pim2Q62070 370 aa15.36■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Zap70P43404 618 aa15.36■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Ankrd13dQ6PD24 605 aa15.36■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Mphosph10Q810V0 681 aaKnown RBP15.36■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Prr5lA2AVJ5 370 aa15.35■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Slfnl1Q8BHW9 410 aa15.35■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Kdm2bQ6P1G2 1309 aa15.35■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Gnl3lQ6PGG6 577 aaKnown RBP15.35■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Rapgef4Q9EQZ6 1011 aa15.35■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Stk36Q69ZM6 1316 aa15.34■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Q8BT18 775 aa15.34■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Plch1Q4KWH5 1682 aa15.34■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Ddx58Q6Q899 926 aa15.34■□□□□ 0.05
Ddx55-202ENSMUST00000111438 4933416C03RikQ3V063 378 aa15.33■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Lrrc43Q3V0L5 667 aa15.33■□□□□ 0.05
Ddx55-202ENSMUST00000111438 AbraQ8BUZ1 375 aa15.33■□□□□ 0.05
Ddx55-202ENSMUST00000111438 Zfyve9A2A8R0 1397 aa15.33■□□□□ 0.04
Ddx55-202ENSMUST00000111438 AK157302I3ITR1 129 aa15.33■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Isca1Q9D924 129 aa15.33■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Dpf1Q9QX66 387 aa15.33■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Col11a2Q64739 1736 aa15.33■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Eif3aP23116 1344 aaKnown RBP15.32■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Prkar2bP31324 416 aa15.32■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Tm6sf1P58749 370 aa15.32■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Ltb4r2Q9JJL9 360 aa15.32■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Rlbp1Q9Z275 317 aa15.32■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Cfdp1O88271 295 aaKnown RBP15.31■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Apba2P98084 750 aa15.31■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Ripor2Q80U16 1078 aa15.31■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Greb1lB9EJV3 1913 aa15.31■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Esco1Q69Z69 843 aa15.31■□□□□ 0.04
Ddx55-202ENSMUST00000111438 Fkbp1aP26883 108 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 22,080 RNA–protein pairs in 17.3 ms