RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Ly6dP35459 127 aa11.56□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Ptf1aQ9QX98 324 aa11.56□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Hoxc9P09633 260 aa11.55□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Fubp1Q91WJ8 651 aaKnown RBP11.55□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Atg3Q9CPX6 314 aa11.55□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Jbts17Q8CE72 3214 aa11.55□□□□□ -0.56
Scn8a-202ENSMUST00000096198 CenpjQ569L8 1344 aa11.55□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Lama3Q61789 3330 aa11.55□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Crb1Q8VHS2 1405 aa11.54□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Wdhd1P59328 1117 aa11.54□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Nphp4P59240 1425 aa11.53□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Tm4sf4Q91XD3 202 aa11.53□□□□□ -0.56
Scn8a-202ENSMUST00000096198 FanciQ8K368 1330 aa11.53□□□□□ -0.56
Scn8a-202ENSMUST00000096198 Gm21663A0A0G2JE01 267 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Gm7361D3Z6R1 267 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 March10E9PX79 788 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 5031410I06RikE9Q4E0 267 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Gm1979E9QAN3 267 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Gm5862K7N5V5 267 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Gm10220K7N660 267 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Ankrd13cQ3UX43 541 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Ccne1Q61457 408 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 RubcnQ80U62 956 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Ints5Q8CHT3 1018 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Angel2Q8K1C0 544 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Cap2Q9CYT6 476 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Sos1Q62245 1319 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 CemipQ8BI06 1361 aa11.52□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Uhrf1bp1B2KF50 1429 aa11.51□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Dcaf5Q80T85 946 aa11.5□□□□□ -0.57
Scn8a-202ENSMUST00000096198 ThemisQ8BGW0 636 aa11.5□□□□□ -0.57
Scn8a-202ENSMUST00000096198 HmcesQ8R1M0 353 aaKnown RBP11.5□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Rock1P70335 1354 aa11.5□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Kndc1Q0KK55 1742 aa11.49□□□□□ -0.57
Scn8a-202ENSMUST00000096198 4930572O03RikQ8C5Y0 211 aa11.49□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Gtf2e1Q9D0D5 440 aa11.49□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Slc4a1apE9PX68 744 aa11.48□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Lrch1P62046 709 aa11.48□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Atp1b3P97370 278 aa11.48□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Clul1Q3ZRW6 464 aa11.48□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Celf2Q9Z0H4 508 aaKnown RBP11.48□□□□□ -0.57
Scn8a-202ENSMUST00000096198 InsrP15208 1372 aa11.48□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Tanc1Q0VGY8 1856 aa11.47□□□□□ -0.57
Scn8a-202ENSMUST00000096198 OsbpQ3B7Z2 805 aa11.47□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Clcn1Q64347 994 aa11.47□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Igf2bp3Q9CPN8 579 aaKnown RBP11.47□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Prr14lE9Q7C4 1971 aa11.47□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Col9a1Q05722 921 aa11.46□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Ppp1r37Q8BKR5 712 aa11.46□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Col25a1Q99MQ5 666 aa11.46□□□□□ -0.57
Scn8a-202ENSMUST00000096198 Cep350E9Q309 3095 aa11.45□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Csf1rP09581 977 aa11.45□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Itgb7P26011 806 aa11.45□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Dpf2Q61103 391 aaKnown RBP11.45□□□□□ -0.58
Scn8a-202ENSMUST00000096198 GorabQ8BRM2 368 aa11.45□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Cxcl9P18340 126 aa11.44□□□□□ -0.58
Scn8a-202ENSMUST00000096198 UbtfP25976 765 aaKnown RBP11.44□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Jmjd4Q8BFT6 427 aa11.44□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Znf784Q8BI69 297 aa11.44□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Slc5a1Q8C3K6 665 aa11.44□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Trip6Q9Z1Y4 480 aa11.44□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Olfr247E9PVJ7 320 aa11.43□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Olfr819K7N727 320 aa11.43□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Vil1Q62468 827 aa11.43□□□□□ -0.58
Scn8a-202ENSMUST00000096198 RragcQ99K70 398 aa11.43□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Aebp2Q9Z248 504 aaKnown RBP11.43□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Skor2A7M7C7 1008 aa11.42□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Skint7A7XV04 395 aa11.42□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Grm1P97772 1199 aa11.42□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Simc1E9Q6E9 1354 aa11.41□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Bach1P97302 739 aa11.41□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Zc3h15Q3TIV5 426 aaKnown RBP11.41□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Gpr101Q80T62 511 aa11.41□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Parp14Q2EMV9 1817 aa11.41□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Gm8882E9Q7E4 283 aa11.4□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Ppp1r15aP17564 657 aa11.4□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Lrrc43Q3V0L5 667 aa11.4□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Asic4Q7TNS7 539 aa11.4□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Sirt2Q8VDQ8 389 aa11.4□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Pdzd3Q99MJ6 498 aa11.4□□□□□ -0.58
Scn8a-202ENSMUST00000096198 Ubn2Q80WC1 1314 aa11.39□□□□□ -0.59
Scn8a-202ENSMUST00000096198 HunkO88866 714 aa11.39□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Ppp1r26Q6A025 1163 aa11.39□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Crlf2Q8CII9 359 aa11.39□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Kif13bA0A286YCV9 1847 aa11.39□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Strn4P58404 760 aa11.38□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Thrap3Q569Z6 951 aaKnown RBP11.38□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Gpbp1l1Q6NZP2 473 aa11.38□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Fhdc1Q3ULZ2 1149 aa11.37□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Pcdh15Q99PJ1 1943 aa11.37□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Kmt2eQ3UG20 1868 aa11.36□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Birc3O08863 600 aa11.36□□□□□ -0.59
Scn8a-202ENSMUST00000096198 CalcaP70160 136 aa11.36□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Ppm1jQ149T7 507 aa11.36□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Dok7Q18PE0 504 aa11.36□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Q3UK37 420 aa11.36□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Ccdc81Q9D5W4 654 aa11.36□□□□□ -0.59
Scn8a-202ENSMUST00000096198 NynrinQ5DTZ0 1840 aa11.36□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Mrc1Q61830 1456 aa11.36□□□□□ -0.59
Scn8a-202ENSMUST00000096198 Phldb3E9QAF4 648 aa11.35□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 13.7 ms